Strain Fitness in Shewanella oneidensis MR-1 around SO2533

Experiment: Bacitracin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bacitracin 0.5 mg/ml
2,660,477	+	def-3	SO2530	0.67	+0.2
2,660,477	+	def-3	SO2530	0.67	-0.3
2,660,532	-	def-3	SO2530	0.78	-0.2
2,660,532	-	def-3	SO2530	0.78	+0.2
2,660,581	+	def-3	SO2530	0.88	-0.9
2,660,680	+				-0.0
2,660,817	-				+0.3
2,660,933	-				+0.5
2,660,968	+				-0.5
2,661,004	-		SO2532	0.19	-2.4
2,661,123	-		SO2532	0.53	+0.3
2,661,317	+				+0.4
2,661,381	-				-2.4
2,661,406	+				-0.2
2,661,406	+				-0.6
2,661,414	-				-2.4
2,661,451	+				-0.9
2,661,451	+				-3.1
2,661,654	-		SO2533	0.29	-3.6
2,661,683	+		SO2533	0.32	-0.9
2,661,691	-		SO2533	0.33	-1.0
2,661,696	+		SO2533	0.34	-1.6
2,661,766	-		SO2533	0.43	-2.9
2,661,766	-		SO2533	0.43	-1.1
2,661,982	-		SO2533	0.70	-1.0
2,662,085	+		SO2533	0.83	-1.5
2,662,097	+		SO2533	0.84	-1.3
2,662,130	+		SO2533	0.88	-1.4
2,662,253	-				+0.3
2,662,545	-		SO2535	0.23	-0.9
2,662,569	+		SO2535	0.26	+0.3
2,662,626	+		SO2535	0.34	-1.2
2,662,626	+		SO2535	0.34	-1.0
2,662,626	+		SO2535	0.34	+0.1
2,662,626	+		SO2535	0.34	+1.1
2,662,634	-		SO2535	0.35	+0.6
2,662,634	-		SO2535	0.35	+0.6
2,662,634	-		SO2535	0.35	+0.2
2,662,738	-		SO2535	0.48	+0.1
2,662,761	+		SO2535	0.51	-0.1
2,662,818	-		SO2535	0.58	-0.1
2,662,949	-		SO2535	0.75	-0.6
2,662,954	-		SO2535	0.76	+0.8
2,663,008	+		SO2535	0.83	+0.5
2,663,016	-		SO2535	0.84	-0.6
2,663,025	+		SO2535	0.85	-1.2
2,663,073	+				-0.0
2,663,073	+				+0.8
2,663,081	-				+0.2
2,663,081	-				-1.1
2,663,082	-				-0.2
2,663,105	+				-0.2