Experiment: Bacitracin 0.5 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SO2501 and exsB are separated by 188 nucleotides exsB and SO2504 overlap by 4 nucleotides
SO2501: SO2501 - radical activating enzyme (NCBI ptt file), at 2,627,105 to 2,627,773
SO2501
SO2503: exsB - exsB protein (NCBI ptt file), at 2,627,962 to 2,628,678
exsB
SO2504: SO2504 - conserved hypothetical protein (NCBI ptt file), at 2,628,675 to 2,629,289
SO2504
Position (kb)
2627
2628
2629 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2627.101 kb on - strand at 2627.134 kb on + strand at 2627.210 kb on - strand, within SO2501 at 2627.217 kb on - strand, within SO2501 at 2627.315 kb on + strand, within SO2501 at 2627.315 kb on + strand, within SO2501 at 2627.315 kb on + strand, within SO2501 at 2627.323 kb on - strand, within SO2501 at 2627.450 kb on + strand, within SO2501 at 2627.520 kb on + strand, within SO2501 at 2627.520 kb on + strand, within SO2501 at 2627.528 kb on - strand, within SO2501 at 2627.530 kb on - strand, within SO2501 at 2627.590 kb on + strand, within SO2501 at 2627.598 kb on - strand, within SO2501 at 2627.646 kb on - strand, within SO2501 at 2627.674 kb on + strand, within SO2501 at 2627.919 kb on - strand at 2628.074 kb on + strand, within exsB at 2628.082 kb on - strand, within exsB at 2628.185 kb on + strand, within exsB at 2628.197 kb on + strand, within exsB at 2628.197 kb on + strand, within exsB at 2628.251 kb on - strand, within exsB at 2628.252 kb on - strand, within exsB at 2628.294 kb on + strand, within exsB at 2628.474 kb on - strand, within exsB at 2628.474 kb on - strand, within exsB at 2628.523 kb on + strand, within exsB at 2628.523 kb on + strand, within exsB at 2628.531 kb on - strand, within exsB at 2628.623 kb on - strand at 2628.673 kb on + strand at 2628.737 kb on - strand, within SO2504 at 2628.891 kb on + strand, within SO2504 at 2628.922 kb on + strand, within SO2504 at 2628.979 kb on + strand, within SO2504 at 2629.239 kb on + strand at 2629.247 kb on - strand at 2629.394 kb on - strand at 2629.419 kb on + strand at 2629.427 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 0.5 mg/ml remove 2,627,101 - -0.2 2,627,134 + +0.3 2,627,210 - SO2501 0.16 +0.4 2,627,217 - SO2501 0.17 -0.8 2,627,315 + SO2501 0.31 +0.4 2,627,315 + SO2501 0.31 +0.0 2,627,315 + SO2501 0.31 +0.7 2,627,323 - SO2501 0.33 +0.8 2,627,450 + SO2501 0.52 +0.5 2,627,520 + SO2501 0.62 -0.5 2,627,520 + SO2501 0.62 -0.6 2,627,528 - SO2501 0.63 -0.1 2,627,530 - SO2501 0.64 -0.1 2,627,590 + SO2501 0.72 -1.6 2,627,598 - SO2501 0.74 +0.5 2,627,646 - SO2501 0.81 -0.3 2,627,674 + SO2501 0.85 -1.5 2,627,919 - +0.7 2,628,074 + exsB SO2503 0.16 -0.5 2,628,082 - exsB SO2503 0.17 -1.8 2,628,185 + exsB SO2503 0.31 -0.4 2,628,197 + exsB SO2503 0.33 -0.2 2,628,197 + exsB SO2503 0.33 -0.2 2,628,251 - exsB SO2503 0.40 -2.8 2,628,252 - exsB SO2503 0.40 -1.0 2,628,294 + exsB SO2503 0.46 -1.7 2,628,474 - exsB SO2503 0.71 -3.2 2,628,474 - exsB SO2503 0.71 -2.4 2,628,523 + exsB SO2503 0.78 +0.0 2,628,523 + exsB SO2503 0.78 -1.3 2,628,531 - exsB SO2503 0.79 -2.6 2,628,623 - -3.3 2,628,673 + +0.1 2,628,737 - SO2504 0.10 -2.7 2,628,891 + SO2504 0.35 -3.6 2,628,922 + SO2504 0.40 -3.1 2,628,979 + SO2504 0.49 -2.6 2,629,239 + +0.1 2,629,247 - -0.6 2,629,394 - -0.4 2,629,419 + -1.8 2,629,427 - -1.7
Or see this region's nucleotide sequence