Strain Fitness in Shewanella oneidensis MR-1 around SO2432
Experiment: Bacitracin 0.5 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Bacitracin 0.5 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,539,886 | + | -2.6 | |||
2,539,891 | + | -2.2 | |||
2,539,964 | - | ruvC | SO2431 | 0.14 | -3.3 |
2,540,395 | - | -3.4 | |||
2,540,475 | + | -2.1 | |||
2,540,483 | - | -0.1 | |||
2,540,570 | - | -1.0 | |||
2,540,855 | - | SO2432 | 0.34 | -0.6 | |
2,540,924 | + | SO2432 | 0.43 | -1.2 | |
2,540,980 | - | SO2432 | 0.51 | +0.1 | |
2,541,074 | + | SO2432 | 0.63 | -2.0 | |
2,541,311 | - | -0.3 | |||
2,541,356 | + | -1.8 | |||
2,541,362 | - | +0.1 | |||
2,541,364 | - | +0.7 | |||
2,541,364 | - | +0.0 | |||
2,541,364 | - | -1.0 | |||
2,541,390 | + | -2.2 | |||
2,541,441 | + | -1.2 | |||
2,541,441 | + | -1.9 | |||
2,541,592 | + | -3.2 |
Or see this region's nucleotide sequence