Strain Fitness in Shewanella oneidensis MR-1 around SO1949

Experiment: Bacitracin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bacitracin 0.5 mg/ml
2,051,057	+		SO1948	0.44	-2.1
2,051,099	+		SO1948	0.47	+0.1
2,051,182	+		SO1948	0.53	+0.7
2,051,196	+				+2.2
2,051,205	-		SO1948	0.55	-0.4
2,051,273	+		SO1948	0.60	-0.0
2,051,341	+		SO1948	0.65	+0.3
2,051,349	-		SO1948	0.66	+0.0
2,051,361	+		SO1948	0.67	+0.0
2,051,385	-		SO1948	0.69	-0.9
2,051,385	-		SO1948	0.69	-0.3
2,051,395	-		SO1948	0.69	+0.4
2,051,457	+		SO1948	0.74	+0.2
2,051,465	-		SO1948	0.75	-1.1
2,051,468	+		SO1948	0.75	-0.5
2,051,524	+		SO1948	0.79	+0.9
2,051,719	-				+0.3
2,051,719	-				-0.3
2,051,965	+				+0.1
2,051,996	+				+0.6
2,052,004	-				-0.6
2,052,015	+				+0.3
2,052,054	-				-0.3
2,052,054	-				-0.7
2,052,087	-				+0.3
2,052,087	-				+0.7
2,052,087	-				+0.6
2,052,087	-				-0.7
2,052,087	-				+0.4
2,052,122	+				-0.5
2,052,130	-				+0.6
2,052,205	+				+0.3
2,052,213	+				+0.6
2,052,213	+				-0.6
2,052,213	+				+0.4
2,052,213	+				-2.1
2,052,213	+				-0.7
2,052,213	-				-0.0
2,052,221	-				-0.5
2,052,233	-				-1.3
2,052,354	+				+0.3
2,052,377	-				-1.5
2,052,425	+		SO1949	0.11	+1.0
2,052,441	+		SO1949	0.11	+0.4
2,052,451	+		SO1949	0.12	+0.3
2,052,451	+		SO1949	0.12	+0.6
2,052,459	-		SO1949	0.12	+0.3
2,052,502	+		SO1949	0.13	-0.4
2,052,509	-		SO1949	0.13	-1.8
2,052,598	-		SO1949	0.16	+0.4
2,052,628	+		SO1949	0.16	-0.6
2,052,636	-		SO1949	0.17	-0.4
2,052,716	+		SO1949	0.19	-0.3
2,052,854	+		SO1949	0.23	+1.3
2,052,862	-		SO1949	0.23	-0.4
2,052,958	+		SO1949	0.25	+0.1
2,052,966	-		SO1949	0.26	-1.7
2,052,966	-		SO1949	0.26	+0.5
2,052,966	-		SO1949	0.26	+0.0
2,052,967	+		SO1949	0.26	+0.1
2,053,051	+		SO1949	0.28	+0.6
2,053,071	+		SO1949	0.28	+0.1
2,053,071	+		SO1949	0.28	+1.1
2,053,141	+		SO1949	0.30	+0.9
2,053,149	+		SO1949	0.31	+0.3
2,053,149	+		SO1949	0.31	-0.5
2,053,166	+		SO1949	0.31	-0.5
2,053,166	-		SO1949	0.31	-2.4
2,053,182	+		SO1949	0.31	-0.3
2,053,204	-		SO1949	0.32	-0.3
2,053,246	+		SO1949	0.33	+0.1
2,053,300	-		SO1949	0.35	-0.5
2,053,300	-		SO1949	0.35	+0.2
2,053,323	-		SO1949	0.35	+0.3
2,053,386	+		SO1949	0.37	+1.0
2,053,387	+		SO1949	0.37	-1.1
2,053,395	-		SO1949	0.37	-0.6
2,053,435	+		SO1949	0.38	-0.5
2,053,435	+		SO1949	0.38	-0.5
2,053,443	-		SO1949	0.38	-0.6
2,053,453	-		SO1949	0.39	+0.9
2,053,502	-		SO1949	0.40	+0.8
2,053,559	+		SO1949	0.42	+0.5
2,053,568	+		SO1949	0.42	+0.2
2,053,568	+		SO1949	0.42	+0.5
2,053,569	+		SO1949	0.42	-0.9
2,053,569	+		SO1949	0.42	-0.1
2,053,569	+		SO1949	0.42	+0.2
2,053,576	-		SO1949	0.42	+0.1
2,053,577	-		SO1949	0.42	+0.4
2,053,614	+		SO1949	0.43	-0.1
2,053,642	-		SO1949	0.44	-0.7
2,053,650	+		SO1949	0.44	-0.1
2,053,657	-		SO1949	0.44	-1.0
2,053,658	-		SO1949	0.44	+0.6
2,053,708	+		SO1949	0.46	-1.2
2,053,718	+		SO1949	0.46	-0.4
2,053,718	+		SO1949	0.46	+0.5
2,053,718	+		SO1949	0.46	-0.2
2,053,726	-		SO1949	0.46	-3.2
2,053,762	-		SO1949	0.47	+0.3
2,053,795	-		SO1949	0.48	+0.8
2,053,795	-		SO1949	0.48	-0.5
2,053,880	-		SO1949	0.50	+0.1
2,053,989	+		SO1949	0.53	-2.8
2,053,997	-		SO1949	0.53	-0.3
2,053,998	-		SO1949	0.53	-1.6
2,054,022	-		SO1949	0.54	-0.2
2,054,022	-		SO1949	0.54	-0.2
2,054,043	-		SO1949	0.55	+0.4
2,054,054	-		SO1949	0.55	-0.2
2,054,055	-		SO1949	0.55	-0.1
2,054,066	+		SO1949	0.55	+0.1
2,054,066	+		SO1949	0.55	+0.5
2,054,159	+		SO1949	0.58	+0.5
2,054,167	-		SO1949	0.58	-0.6
2,054,167	-		SO1949	0.58	+0.7
2,054,167	-		SO1949	0.58	-0.0
2,054,167	-		SO1949	0.58	+0.1
2,054,210	+		SO1949	0.59	-0.7
2,054,218	-		SO1949	0.59	-0.9
2,054,273	+		SO1949	0.61	-1.1
2,054,349	+		SO1949	0.63	+0.6
2,054,413	-		SO1949	0.65	+0.2
2,054,417	+		SO1949	0.65	+0.6
2,054,425	-		SO1949	0.65	+0.6
2,054,425	-		SO1949	0.65	-1.5
2,054,425	-				-0.9
2,054,425	-		SO1949	0.65	+1.2
2,054,425	-		SO1949	0.65	+0.1
2,054,430	-		SO1949	0.65	+0.7
2,054,465	+		SO1949	0.66	+0.2
2,054,473	-		SO1949	0.66	+0.3
2,054,498	-		SO1949	0.67	+0.3
2,054,503	-		SO1949	0.67	+0.0
2,054,506	+		SO1949	0.67	+1.5
2,054,506	+		SO1949	0.67	-0.6
2,054,506	+		SO1949	0.67	-1.0
2,054,514	-		SO1949	0.67	+0.1
2,054,560	-		SO1949	0.68	+0.1
2,054,619	-		SO1949	0.70	+0.6
2,054,717	+		SO1949	0.73	-0.4
2,054,724	+		SO1949	0.73	-0.2
2,054,725	-		SO1949	0.73	-0.7
2,054,725	-		SO1949	0.73	-0.3
2,054,726	-		SO1949	0.73	-0.5
2,054,730	+		SO1949	0.73	+1.1
2,054,730	+		SO1949	0.73	+1.3
2,054,732	+		SO1949	0.73	-0.3
2,054,738	-		SO1949	0.73	+0.6
2,054,740	-		SO1949	0.73	+0.5
2,054,751	+		SO1949	0.74	-0.9
2,054,751	+		SO1949	0.74	-1.1
2,054,751	+		SO1949	0.74	-0.5
2,054,759	-		SO1949	0.74	-0.1
2,054,759	-		SO1949	0.74	-0.7
2,054,774	+		SO1949	0.74	-1.2
2,054,774	+		SO1949	0.74	+0.8
2,054,774	-		SO1949	0.74	+0.3
2,054,774	-		SO1949	0.74	-0.2
2,054,776	+		SO1949	0.74	-0.6
2,054,776	+		SO1949	0.74	-0.6
2,054,776	+		SO1949	0.74	+0.4
2,054,776	+		SO1949	0.74	+0.5
2,054,776	+		SO1949	0.74	+0.5
2,054,776	+		SO1949	0.74	-0.2
2,054,776	+		SO1949	0.74	-0.7
2,054,784	-		SO1949	0.75	+0.1
2,054,784	-		SO1949	0.75	-0.6
2,054,784	-		SO1949	0.75	-1.8
2,054,784	-		SO1949	0.75	+0.1
2,054,784	-		SO1949	0.75	-0.0
2,054,784	-		SO1949	0.75	-0.2
2,054,789	+		SO1949	0.75	-0.2
2,054,789	+		SO1949	0.75	-0.8
2,054,795	+		SO1949	0.75	+0.5
2,054,796	+		SO1949	0.75	+0.1
2,054,796	+		SO1949	0.75	-0.4
2,054,796	+		SO1949	0.75	+0.7
2,054,796	+		SO1949	0.75	+0.5
2,054,796	+		SO1949	0.75	+0.5
2,054,796	+		SO1949	0.75	-0.4
2,054,796	+		SO1949	0.75	+0.1
2,054,796	+		SO1949	0.75	-0.1
2,054,796	-		SO1949	0.75	+1.3
2,054,797	+		SO1949	0.75	+0.6
2,054,797	-		SO1949	0.75	-1.6
2,054,803	-		SO1949	0.75	+0.4
2,054,803	-		SO1949	0.75	-0.3
2,054,804	-		SO1949	0.75	-0.3
2,054,804	-		SO1949	0.75	-0.7
2,054,810	+		SO1949	0.75	+0.5
2,054,811	-		SO1949	0.75	+0.1
2,054,811	-		SO1949	0.75	+0.9
2,054,818	-		SO1949	0.75	+0.3
2,054,836	-		SO1949	0.76	-0.1
2,054,838	+		SO1949	0.76	+0.6
2,054,850	+		SO1949	0.76	-0.4
2,054,850	+		SO1949	0.76	+0.5
2,054,850	+		SO1949	0.76	+0.3
2,054,850	+		SO1949	0.76	-0.1
2,054,850	+		SO1949	0.76	+0.3
2,054,850	+		SO1949	0.76	-0.8
2,054,850	+		SO1949	0.76	-1.0
2,054,850	+		SO1949	0.76	+0.0
2,054,858	-		SO1949	0.77	+0.3
2,054,858	-		SO1949	0.77	-0.5
2,054,858	-		SO1949	0.77	+0.5
2,054,858	-		SO1949	0.77	-0.9
2,054,881	-		SO1949	0.77	+0.9
2,054,881	-		SO1949	0.77	-0.3
2,054,881	-		SO1949	0.77	-0.3
2,054,919	+		SO1949	0.78	-0.5
2,054,919	+		SO1949	0.78	-0.1
2,054,919	+		SO1949	0.78	+0.4
2,054,919	+		SO1949	0.78	+0.7
2,054,919	+		SO1949	0.78	+0.6
2,054,919	+		SO1949	0.78	-0.0
2,054,919	+		SO1949	0.78	-0.3
2,054,919	+		SO1949	0.78	-0.3
2,054,919	+		SO1949	0.78	+0.5
2,054,919	+		SO1949	0.78	-0.4
2,054,919	+		SO1949	0.78	-1.4
2,054,919	+		SO1949	0.78	+0.7
2,054,919	+		SO1949	0.78	+1.1
2,054,919	+		SO1949	0.78	-0.5
2,054,919	+		SO1949	0.78	-0.2
2,054,919	+		SO1949	0.78	+0.4
2,054,919	+		SO1949	0.78	+0.9
2,054,919	+		SO1949	0.78	+0.0
2,054,919	+		SO1949	0.78	-0.6
2,054,919	+		SO1949	0.78	+0.2
2,054,920	+		SO1949	0.78	+0.6
2,054,922	-		SO1949	0.78	-0.1
2,054,927	-		SO1949	0.78	+0.9
2,054,927	-		SO1949	0.78	+0.2
2,054,927	-		SO1949	0.78	-1.3
2,054,927	-		SO1949	0.78	-1.0
2,054,927	-		SO1949	0.78	-0.1
2,054,927	-		SO1949	0.78	+0.1
2,054,927	-		SO1949	0.78	-0.3
2,054,927	-		SO1949	0.78	+0.8
2,054,927	-		SO1949	0.78	-2.0
2,054,927	-		SO1949	0.78	-2.2
2,054,927	-		SO1949	0.78	-0.2
2,054,927	-		SO1949	0.78	-0.1
2,054,927	-		SO1949	0.78	-1.4
2,054,927	-		SO1949	0.78	-0.2
2,054,927	-		SO1949	0.78	-0.0
2,054,927	-		SO1949	0.78	-1.1
2,054,927	-		SO1949	0.78	-0.9
2,054,927	-		SO1949	0.78	-0.5
2,054,927	-		SO1949	0.78	+0.3
2,054,927	-		SO1949	0.78	-1.3
2,054,927	-		SO1949	0.78	-0.1
2,054,945	-		SO1949	0.79	+3.2
2,054,947	+		SO1949	0.79	-0.8
2,054,953	-		SO1949	0.79	+0.0
2,055,026	+		SO1949	0.81	-0.9
2,055,026	+		SO1949	0.81	+0.6
2,055,026	+		SO1949	0.81	+0.5
2,055,034	-		SO1949	0.81	-0.4
2,055,045	+		SO1949	0.82	+0.4
2,055,045	+		SO1949	0.82	-0.2
2,055,045	+		SO1949	0.82	-1.7
2,055,045	+		SO1949	0.82	+0.4
2,055,045	+		SO1949	0.82	+0.7
2,055,045	+		SO1949	0.82	+0.5
2,055,053	-		SO1949	0.82	-0.9
2,055,053	-		SO1949	0.82	+1.2
2,055,053	-		SO1949	0.82	-1.0
2,055,053	-		SO1949	0.82	-0.1
2,055,053	-		SO1949	0.82	+0.1
2,055,053	-		SO1949	0.82	-0.2
2,055,053	-		SO1949	0.82	+0.2
2,055,053	-		SO1949	0.82	+1.4
2,055,059	-		SO1949	0.82	+0.7
2,055,071	+		SO1949	0.82	+0.9
2,055,078	+		SO1949	0.82	-0.2
2,055,086	-		SO1949	0.83	-0.8
2,055,120	+		SO1949	0.84	-0.4
2,055,150	+		SO1949	0.84	-0.4
2,055,156	+		SO1949	0.85	-1.7
2,055,158	-		SO1949	0.85	-1.0
2,055,164	-		SO1949	0.85	+0.4
2,055,230	+		SO1949	0.87	-1.8
2,055,233	-		SO1949	0.87	+0.4
2,055,233	-		SO1949	0.87	+0.3
2,055,235	+		SO1949	0.87	-0.2
2,055,235	+		SO1949	0.87	+0.6
2,055,235	+		SO1949	0.87	-0.2
2,055,237	+		SO1949	0.87	-1.7
2,055,237	+		SO1949	0.87	-1.3
2,055,237	+		SO1949	0.87	-1.4
2,055,240	+		SO1949	0.87	-1.3
2,055,240	+		SO1949	0.87	+0.4
2,055,243	-		SO1949	0.87	+1.0
2,055,243	-		SO1949	0.87	+0.5
2,055,243	-		SO1949	0.87	-0.0
2,055,243	-		SO1949	0.87	+0.1
2,055,243	-		SO1949	0.87	+0.9
2,055,243	-		SO1949	0.87	-0.3
2,055,245	-		SO1949	0.87	-1.6
2,055,259	+		SO1949	0.87	-0.4
2,055,259	+		SO1949	0.87	-0.0
2,055,259	+		SO1949	0.87	-0.3
2,055,259	+		SO1949	0.87	-0.4
2,055,259	+		SO1949	0.87	+0.5
2,055,262	-		SO1949	0.87	+0.5
2,055,263	-		SO1949	0.87	-1.1
2,055,264	+		SO1949	0.87	-0.6
2,055,264	+		SO1949	0.87	-0.2
2,055,264	+		SO1949	0.87	+0.3
2,055,264	+		SO1949	0.87	+0.3
2,055,264	+		SO1949	0.87	-0.1
2,055,264	+		SO1949	0.87	+0.2
2,055,264	+		SO1949	0.87	+0.4
2,055,264	+		SO1949	0.87	-0.2
2,055,264	+		SO1949	0.87	+0.6
2,055,267	-		SO1949	0.88	+0.1
2,055,267	-		SO1949	0.88	+0.8
2,055,267	-		SO1949	0.88	+1.2
2,055,267	-		SO1949	0.88	+1.1
2,055,269	+		SO1949	0.88	+0.9
2,055,269	+		SO1949	0.88	+0.5
2,055,269	+		SO1949	0.88	-0.6
2,055,272	-		SO1949	0.88	-1.0
2,055,272	-		SO1949	0.88	-0.8
2,055,272	-		SO1949	0.88	-0.2
2,055,272	-		SO1949	0.88	+0.5
2,055,272	-		SO1949	0.88	-0.6
2,055,272	-		SO1949	0.88	-0.3
2,055,299	-		SO1949	0.88	-0.5
2,055,311	-		SO1949	0.89	-0.5
2,055,337	-		SO1949	0.89	-1.3
2,055,349	+		SO1949	0.90	-0.1
2,055,349	+		SO1949	0.90	+0.4
2,055,349	+		SO1949	0.90	+0.4
2,055,349	+		SO1949	0.90	-0.3
2,055,349	+		SO1949	0.90	+0.1
2,055,349	+		SO1949	0.90	-0.6
2,055,349	+		SO1949	0.90	-0.5
2,055,349	+		SO1949	0.90	-0.5
2,055,349	+		SO1949	0.90	+0.1
2,055,349	+		SO1949	0.90	-0.2
2,055,349	+		SO1949	0.90	-0.6
2,055,349	+		SO1949	0.90	-0.0
2,055,349	+		SO1949	0.90	+0.8
2,055,349	+		SO1949	0.90	-0.3
2,055,349	+		SO1949	0.90	-0.1
2,055,349	+		SO1949	0.90	+0.6
2,055,349	+		SO1949	0.90	-0.2
2,055,349	+		SO1949	0.90	+0.1
2,055,349	+		SO1949	0.90	+0.0
2,055,349	+		SO1949	0.90	-1.6
2,055,349	+		SO1949	0.90	+0.0
2,055,357	-		SO1949	0.90	-0.5
2,055,357	-		SO1949	0.90	-0.3
2,055,357	-		SO1949	0.90	-0.5
2,055,357	-		SO1949	0.90	-0.4
2,055,357	-		SO1949	0.90	-0.6
2,055,357	-		SO1949	0.90	+0.0
2,055,357	-		SO1949	0.90	-0.5
2,055,357	-		SO1949	0.90	-2.0
2,055,357	-		SO1949	0.90	-0.3
2,055,357	-		SO1949	0.90	+0.1
2,055,357	-		SO1949	0.90	-0.1
2,055,357	-		SO1949	0.90	+0.3
2,055,357	-		SO1949	0.90	-1.6
2,055,357	-		SO1949	0.90	-0.2
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2,055,357	-		SO1949	0.90	+0.0
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2,055,357	-		SO1949	0.90	-0.4
2,055,357	-		SO1949	0.90	-0.1
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2,055,357	-		SO1949	0.90	+0.6
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