Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c28870

Experiment: m.b. Zinc 0.32 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Zinc 0.32 mM
3,026,589	-		PGA1_c28860	0.21	+0.2
3,026,612	-		PGA1_c28860	0.23	-1.5
3,026,642	-		PGA1_c28860	0.25	+1.2
3,026,682	-		PGA1_c28860	0.29	+1.1
3,026,696	-		PGA1_c28860	0.30	+0.3
3,026,789	+		PGA1_c28860	0.38	+0.2
3,026,810	+		PGA1_c28860	0.40	+1.8
3,026,818	-		PGA1_c28860	0.41	+0.2
3,026,822	+		PGA1_c28860	0.41	-0.5
3,026,823	-		PGA1_c28860	0.41	+1.3
3,026,870	-		PGA1_c28860	0.46	+0.6
3,026,931	+		PGA1_c28860	0.51	+0.4
3,026,932	-		PGA1_c28860	0.51	+0.4
3,026,939	-		PGA1_c28860	0.52	+0.1
3,026,939	-		PGA1_c28860	0.52	+0.3
3,026,984	-		PGA1_c28860	0.56	-2.5
3,026,984	-		PGA1_c28860	0.56	+0.5
3,026,993	+		PGA1_c28860	0.56	-0.3
3,026,995	+		PGA1_c28860	0.57	+1.4
3,027,001	-		PGA1_c28860	0.57	+0.3
3,027,003	-		PGA1_c28860	0.57	+1.5
3,027,016	-		PGA1_c28860	0.58	+0.2
3,027,066	-		PGA1_c28860	0.63	+0.3
3,027,170	-		PGA1_c28860	0.72	-0.7
3,027,177	-		PGA1_c28860	0.73	+1.8
3,027,239	+		PGA1_c28860	0.78	-0.5
3,027,259	+		PGA1_c28860	0.80	-0.7
3,027,262	-		PGA1_c28860	0.80	-0.7
3,027,338	+		PGA1_c28860	0.87	+0.9
3,027,341	-		PGA1_c28860	0.87	+0.7
3,027,346	-		PGA1_c28860	0.87	-0.1
3,027,416	+				-0.0
3,027,429	+				+0.2
3,027,496	+				+0.3
3,027,514	-				+0.8
3,027,538	-				+1.0
3,027,543	-				-1.1
3,027,562	+				+0.5
3,027,567	+				+0.2
3,027,570	-				+1.5
3,027,576	-				+0.5
3,027,578	+				+1.5
3,027,742	-				+0.8
3,027,832	+				-0.5
3,027,832	+				+0.7
3,027,840	-				+0.7
3,027,875	-		PGA1_c28870	0.11	+0.0
3,027,875	-		PGA1_c28870	0.11	+0.3
3,027,878	-		PGA1_c28870	0.11	+0.5
3,027,889	+		PGA1_c28870	0.11	+1.3
3,027,889	+		PGA1_c28870	0.11	-0.2
3,027,948	-		PGA1_c28870	0.14	+1.9
3,027,950	+		PGA1_c28870	0.14	-0.5
3,027,995	+		PGA1_c28870	0.15	+0.7
3,028,098	-		PGA1_c28870	0.19	+0.6
3,028,118	+		PGA1_c28870	0.20	-1.8
3,028,118	+		PGA1_c28870	0.20	-0.5
3,028,150	-		PGA1_c28870	0.21	-0.1
3,028,193	+		PGA1_c28870	0.22	+2.3
3,028,260	-		PGA1_c28870	0.24	+0.1
3,028,275	-		PGA1_c28870	0.25	-0.1
3,028,309	+		PGA1_c28870	0.26	-0.6
3,028,327	-		PGA1_c28870	0.27	+0.7
3,028,348	+		PGA1_c28870	0.28	-0.1
3,028,374	+		PGA1_c28870	0.29	+0.2
3,028,392	-		PGA1_c28870	0.29	-0.5
3,028,433	-		PGA1_c28870	0.31	+0.5
3,028,462	+		PGA1_c28870	0.32	+1.0
3,028,462	+		PGA1_c28870	0.32	-0.3
3,028,462	+		PGA1_c28870	0.32	+0.9
3,028,488	+		PGA1_c28870	0.33	-1.6
3,028,501	+		PGA1_c28870	0.33	+0.9
3,028,509	-		PGA1_c28870	0.33	+1.5
3,028,516	+		PGA1_c28870	0.34	+0.5
3,028,530	-		PGA1_c28870	0.34	+0.3
3,028,590	+		PGA1_c28870	0.36	+1.7
3,028,638	+		PGA1_c28870	0.38	+1.3
3,028,646	-		PGA1_c28870	0.38	-2.6
3,028,662	-		PGA1_c28870	0.39	-0.2
3,028,745	-		PGA1_c28870	0.42	-0.2
3,028,758	+		PGA1_c28870	0.42	-0.6
3,028,758	+		PGA1_c28870	0.42	+0.2
3,028,786	-		PGA1_c28870	0.43	-0.5
3,028,787	-		PGA1_c28870	0.43	-0.3
3,028,834	-		PGA1_c28870	0.45	-0.1
3,028,859	+		PGA1_c28870	0.46	+0.9
3,028,935	+		PGA1_c28870	0.48	-0.2
3,028,935	+		PGA1_c28870	0.48	-0.1
3,028,938	-		PGA1_c28870	0.48	-0.6
3,028,943	-		PGA1_c28870	0.49	-0.1
3,028,943	-		PGA1_c28870	0.49	+1.8
3,028,943	-		PGA1_c28870	0.49	-1.5
3,028,962	-		PGA1_c28870	0.49	-0.3
3,029,007	+		PGA1_c28870	0.51	-1.2
3,029,007	+		PGA1_c28870	0.51	+1.9
3,029,007	+		PGA1_c28870	0.51	+3.3
3,029,007	+		PGA1_c28870	0.51	+1.8
3,029,007	+		PGA1_c28870	0.51	+0.5
3,029,015	-		PGA1_c28870	0.51	-1.1
3,029,015	-		PGA1_c28870	0.51	+1.8
3,029,040	+		PGA1_c28870	0.52	+0.5
3,029,152	+		PGA1_c28870	0.56	+0.2
3,029,160	-		PGA1_c28870	0.56	+1.5
3,029,202	-		PGA1_c28870	0.58	+1.8
3,029,256	-		PGA1_c28870	0.60	+0.6
3,029,280	-		PGA1_c28870	0.60	+1.5
3,029,338	+		PGA1_c28870	0.62	+0.5
3,029,405	+		PGA1_c28870	0.65	+1.7
3,029,413	-		PGA1_c28870	0.65	-0.1
3,029,445	+		PGA1_c28870	0.66	+1.5
3,029,531	+		PGA1_c28870	0.69	-0.1
3,029,539	-		PGA1_c28870	0.70	+2.3
3,029,539	-		PGA1_c28870	0.70	-0.7
3,029,546	+		PGA1_c28870	0.70	+1.2
3,029,562	-		PGA1_c28870	0.70	-0.3
3,029,564	+		PGA1_c28870	0.70	-1.3
3,029,570	+		PGA1_c28870	0.71	+0.9
3,029,575	+		PGA1_c28870	0.71	-1.6
3,029,575	+		PGA1_c28870	0.71	-2.0
3,029,622	+		PGA1_c28870	0.72	+0.5
3,029,627	+		PGA1_c28870	0.73	+0.4
3,029,627	+		PGA1_c28870	0.73	+0.5
3,029,629	+		PGA1_c28870	0.73	+0.4
3,029,688	-		PGA1_c28870	0.75	+1.4
3,029,698	-		PGA1_c28870	0.75	-1.1
3,029,705	-		PGA1_c28870	0.75	-1.1
3,029,705	-		PGA1_c28870	0.75	-1.3
3,029,707	+		PGA1_c28870	0.75	-0.5
3,029,709	+				+0.5
3,029,715	-		PGA1_c28870	0.76	+0.8
3,029,715	-		PGA1_c28870	0.76	+1.1
3,029,715	-		PGA1_c28870	0.76	+1.8
3,029,722	-		PGA1_c28870	0.76	+0.7
3,029,722	-		PGA1_c28870	0.76	-2.1
3,029,729	+		PGA1_c28870	0.76	+0.1
3,029,736	+		PGA1_c28870	0.76	-0.8
3,029,742	-		PGA1_c28870	0.77	-0.3
3,029,783	+		PGA1_c28870	0.78	+0.8
3,029,807	-		PGA1_c28870	0.79	-0.1
3,029,897	-		PGA1_c28870	0.82	+1.5
3,029,898	-		PGA1_c28870	0.82	-0.2
3,029,898	-		PGA1_c28870	0.82	+1.4
3,029,921	+		PGA1_c28870	0.83	+0.8
3,029,923	-		PGA1_c28870	0.83	+0.1
3,029,929	-		PGA1_c28870	0.83	+2.5
3,029,962	+		PGA1_c28870	0.84	+1.2
3,030,099	+		PGA1_c28870	0.89	+0.8
3,030,107	-		PGA1_c28870	0.90	+0.2
3,030,125	+				-0.5
3,030,144	-				+1.1
3,030,165	-				-1.6
3,030,167	+				+0.4
3,030,226	+				+0.2
3,030,344	+				+0.2
3,030,345	+				+0.7
3,030,423	+				+0.2
3,030,473	+		PGA1_c28880	0.15	-0.2
3,030,492	-		PGA1_c28880	0.18	+0.7
3,030,515	+		PGA1_c28880	0.22	-0.2
3,030,515	+		PGA1_c28880	0.22	+0.3
3,030,520	+		PGA1_c28880	0.23	-0.9
3,030,524	+		PGA1_c28880	0.24	+0.2
3,030,618	+		PGA1_c28880	0.40	+0.5
3,030,618	+		PGA1_c28880	0.40	+0.8
3,030,658	+		PGA1_c28880	0.47	+0.5
3,030,673	+		PGA1_c28880	0.49	+1.3
3,030,673	+		PGA1_c28880	0.49	-1.5
3,030,707	+		PGA1_c28880	0.55	+0.6
3,030,719	+		PGA1_c28880	0.57	-0.3
3,030,726	-		PGA1_c28880	0.58	-0.2
3,030,750	+		PGA1_c28880	0.63	-0.1
3,030,770	-		PGA1_c28880	0.66	+1.3
3,030,795	+		PGA1_c28880	0.70	-2.1
3,030,803	-		PGA1_c28880	0.72	-1.8
3,030,842	+		PGA1_c28880	0.78	+0.9
3,030,874	+		PGA1_c28880	0.84	-0.9
3,030,889	+		PGA1_c28880	0.86	-0.3
3,030,889	+		PGA1_c28880	0.86	+2.5
3,030,889	+		PGA1_c28880	0.86	-0.7
3,030,889	+		PGA1_c28880	0.86	-0.2
3,030,897	-		PGA1_c28880	0.88	+0.4
3,030,897	-		PGA1_c28880	0.88	-0.1
3,030,986	-				-0.2
3,030,986	-				+0.3
3,030,986	-				+1.0
3,031,010	-				+0.3
3,031,060	+		PGA1_c28890	0.12	+0.7
3,031,060	+		PGA1_c28890	0.12	+1.5
3,031,060	+		PGA1_c28890	0.12	+0.5
3,031,060	+		PGA1_c28890	0.12	+1.5
3,031,068	-		PGA1_c28890	0.13	+1.5
3,031,097	-		PGA1_c28890	0.17	-0.5
3,031,130	-		PGA1_c28890	0.21	-0.5
3,031,134	+		PGA1_c28890	0.21	+2.1
3,031,167	+		PGA1_c28890	0.26	+1.1
3,031,183	-		PGA1_c28890	0.28	+1.1
3,031,185	+		PGA1_c28890	0.28	+0.6
3,031,193	-		PGA1_c28890	0.29	-1.1
3,031,295	-		PGA1_c28890	0.42	+0.5
3,031,298	+		PGA1_c28890	0.42	+2.1
3,031,306	-		PGA1_c28890	0.43	-0.1
3,031,331	+		PGA1_c28890	0.46	-0.3
3,031,331	+		PGA1_c28890	0.46	+0.3
3,031,331	+		PGA1_c28890	0.46	+0.5
3,031,331	+		PGA1_c28890	0.46	-0.4
3,031,339	-		PGA1_c28890	0.47	+0.3
3,031,339	-		PGA1_c28890	0.47	+1.0
3,031,350	+		PGA1_c28890	0.49	+0.4