Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c00810

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
78,568	+				-0.1
78,637	-				+1.2
78,642	-				-2.5
78,653	+		PGA1_c00790	0.10	-0.1
78,661	-		PGA1_c00790	0.12	-0.9
78,661	-		PGA1_c00790	0.12	-0.1
78,661	-		PGA1_c00790	0.12	+0.7
78,678	+		PGA1_c00790	0.16	-2.7
78,740	+		PGA1_c00790	0.29	+0.6
78,772	+		PGA1_c00790	0.36	-0.3
78,803	+		PGA1_c00790	0.43	-1.5
78,804	+		PGA1_c00790	0.43	+0.4
78,811	-		PGA1_c00790	0.44	-1.2
78,859	-		PGA1_c00790	0.54	+0.3
78,935	-		PGA1_c00790	0.71	-0.1
79,037	-				+1.5
79,065	+				+0.2
79,075	+				-0.8
79,075	+				-0.5
79,075	+				-2.1
79,083	-				+0.0
79,083	-				-0.7
79,133	+				+0.0
79,186	+		PGA1_c00800	0.13	-3.0
79,209	+		PGA1_c00800	0.19	+0.2
79,227	-		PGA1_c00800	0.24	-0.6
79,244	-		PGA1_c00800	0.28	-0.5
79,308	+		PGA1_c00800	0.44	-0.7
79,366	+		PGA1_c00800	0.59	+0.9
79,374	-		PGA1_c00800	0.61	-1.1
79,374	-		PGA1_c00800	0.61	+1.5
79,382	-		PGA1_c00800	0.63	-1.9
79,428	+		PGA1_c00800	0.75	-2.5
79,458	+		PGA1_c00800	0.83	-1.2
79,518	+				-2.8
79,526	-				-0.2
79,539	+				+0.4
79,561	-				+0.0
79,580	-				+1.5
79,580	-				+0.0
79,580	-				+0.3
79,587	+				-1.7
79,659	+				+1.0
79,684	+		PGA1_c00810	0.10	+0.4
79,684	+		PGA1_c00810	0.10	-0.7
79,684	+		PGA1_c00810	0.10	+0.4
79,684	+		PGA1_c00810	0.10	-1.2
79,761	+		PGA1_c00810	0.17	-0.2
79,813	+		PGA1_c00810	0.21	-0.6
79,813	+		PGA1_c00810	0.21	-1.7
79,821	-		PGA1_c00810	0.22	-3.7
79,826	+		PGA1_c00810	0.22	-0.3
79,898	-		PGA1_c00810	0.28	+0.0
79,988	+		PGA1_c00810	0.36	-2.7
80,104	-		PGA1_c00810	0.46	-0.8
80,191	-		PGA1_c00810	0.53	-2.8
80,191	-		PGA1_c00810	0.53	-2.3
80,191	-		PGA1_c00810	0.53	-0.9
80,257	+		PGA1_c00810	0.59	-0.6
80,276	-		PGA1_c00810	0.61	-1.1
80,422	+		PGA1_c00810	0.73	-0.5
80,430	-		PGA1_c00810	0.74	-1.5
80,430	-		PGA1_c00810	0.74	-2.6
80,430	-		PGA1_c00810	0.74	+0.4
80,550	+		PGA1_c00810	0.84	-0.6
80,558	-		PGA1_c00810	0.85	-2.2
80,558	-		PGA1_c00810	0.85	-2.2
80,558	-		PGA1_c00810	0.85	-2.2
80,560	-		PGA1_c00810	0.85	-2.0
80,607	-		PGA1_c00810	0.89	-0.9
80,617	-		PGA1_c00810	0.90	-0.4
80,684	+				-0.3