Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_4250

Experiment: butyrate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	butyrate (C)
4,434,963	-		Psest_4249	0.58	-0.4
4,435,182	-		Psest_4249	0.69	+0.5
4,435,388	+		Psest_4249	0.79	+1.8
4,435,388	+		Psest_4249	0.79	+0.5
4,435,388	+		Psest_4249	0.79	-0.1
4,435,388	+		Psest_4249	0.79	-1.2
4,435,585	+		Psest_4249	0.89	-0.1
4,435,607	-		Psest_4249	0.90	+0.9
4,435,833	+				-0.6
4,435,834	-				-0.4
4,435,834	-				-2.0
4,435,948	+		Psest_4250	0.25	-2.8
4,435,949	-		Psest_4250	0.25	-1.6
4,435,949	-		Psest_4250	0.25	-1.2
4,435,949	-		Psest_4250	0.25	-0.7
4,435,949	-		Psest_4250	0.25	+0.6
4,435,997	-		Psest_4250	0.35	-1.1
4,436,040	-		Psest_4250	0.44	-1.5
4,436,040	-		Psest_4250	0.44	-1.6
4,436,040	-		Psest_4250	0.44	-2.3
4,436,040	-		Psest_4250	0.44	-2.4
4,436,040	-		Psest_4250	0.44	-1.2
4,436,040	-		Psest_4250	0.44	-0.5
4,436,040	-		Psest_4250	0.44	+0.4
4,436,040	-		Psest_4250	0.44	+1.9
4,436,040	-		Psest_4250	0.44	-0.1
4,436,069	+		Psest_4250	0.51	-0.4
4,436,069	+		Psest_4250	0.51	-1.2
4,436,069	+		Psest_4250	0.51	-1.3
4,436,069	+		Psest_4250	0.51	-1.5
4,436,069	+		Psest_4250	0.51	-0.7
4,436,069	+		Psest_4250	0.51	+0.4
4,436,069	+		Psest_4250	0.51	+0.2
4,436,069	+		Psest_4250	0.51	-1.1
4,436,069	+		Psest_4250	0.51	-0.5
4,436,070	-		Psest_4250	0.51	+0.2
4,436,070	-		Psest_4250	0.51	-0.8
4,436,070	-		Psest_4250	0.51	-2.4
4,436,087	+		Psest_4250	0.54	+0.4
4,436,087	+		Psest_4250	0.54	-0.6
4,436,088	-		Psest_4250	0.55	-1.9
4,436,127	+		Psest_4250	0.63	-2.0
4,436,127	+		Psest_4250	0.63	+0.7
4,436,130	-		Psest_4250	0.63	-1.8
4,436,143	-		Psest_4250	0.66	+0.2
4,436,149	+		Psest_4250	0.67	-0.5
4,436,150	-		Psest_4250	0.68	+1.9
4,436,209	+		Psest_4250	0.80	-1.5
4,436,210	-		Psest_4250	0.80	-2.6
4,436,210	-		Psest_4250	0.80	+0.6
4,436,210	-		Psest_4250	0.80	-1.1
4,436,210	-		Psest_4250	0.80	+0.8
4,436,210	-		Psest_4250	0.80	-1.8
4,436,210	-		Psest_4250	0.80	-0.9
4,436,272	+				-2.1
4,436,272	+				-1.4
4,436,272	+				-2.0
4,436,272	+				+0.1
4,436,272	+				-1.3
4,436,272	+				-1.3
4,436,272	+				+2.5
4,436,272	+				+0.2
4,436,272	+				-0.2
4,436,272	+				+0.5
4,436,272	+				-0.4
4,436,273	-				-0.9
4,436,273	-				-1.2
4,436,273	-				-0.1
4,436,273	-				+0.4
4,436,273	-				+0.9
4,436,273	-				-3.0
4,436,273	-				+2.3
4,436,273	-				+0.0
4,436,273	-				-0.9
4,436,303	-				-1.9
4,436,314	+				+1.1
4,436,314	+				+0.4
4,436,315	-				+0.2
4,436,315	-				-0.2
4,436,315	-				-1.0
4,436,347	+				-0.1
4,436,395	+				-0.4
4,436,449	+				-0.6
4,436,579	-				-0.1
4,436,600	-				-0.4
4,436,618	-		Psest_4251	0.10	+0.4
4,436,704	+		Psest_4251	0.13	+0.9
4,436,704	+		Psest_4251	0.13	-1.5
4,436,704	+		Psest_4251	0.13	-0.6
4,436,704	+		Psest_4251	0.13	-0.1
4,436,704	+		Psest_4251	0.13	+0.9
4,436,704	+		Psest_4251	0.13	-0.6
4,436,704	+		Psest_4251	0.13	-2.9
4,436,704	+		Psest_4251	0.13	-1.6
4,436,704	+		Psest_4251	0.13	+0.4
4,436,704	+		Psest_4251	0.13	+0.7
4,436,705	-		Psest_4251	0.13	-0.6
4,436,705	-		Psest_4251	0.13	-0.1
4,436,705	-		Psest_4251	0.13	+0.5
4,436,705	-		Psest_4251	0.13	-2.5
4,436,715	+		Psest_4251	0.13	-1.8
4,436,715	+		Psest_4251	0.13	+1.3
4,436,715	+		Psest_4251	0.13	-1.6
4,436,715	+		Psest_4251	0.13	-0.8
4,436,716	-		Psest_4251	0.14	+0.3
4,436,716	-		Psest_4251	0.14	-0.6
4,436,758	+		Psest_4251	0.15	-1.8
4,436,759	-		Psest_4251	0.15	-1.3
4,436,806	+		Psest_4251	0.17	-0.6
4,436,806	+		Psest_4251	0.17	-0.1
4,436,806	+		Psest_4251	0.17	-0.1
4,436,806	+		Psest_4251	0.17	-0.6
4,436,806	+		Psest_4251	0.17	-1.4
4,436,806	+		Psest_4251	0.17	-1.5
4,436,806	+		Psest_4251	0.17	-0.6
4,436,807	-		Psest_4251	0.17	-2.1
4,436,807	-		Psest_4251	0.17	-1.2
4,436,807	-		Psest_4251	0.17	-1.9
4,436,807	-		Psest_4251	0.17	-0.6
4,436,808	+		Psest_4251	0.17	-0.8
4,436,809	-		Psest_4251	0.17	-1.1
4,436,819	+		Psest_4251	0.17	-2.1
4,436,820	-		Psest_4251	0.17	-0.6
4,436,820	-		Psest_4251	0.17	+0.2
4,436,820	-		Psest_4251	0.17	-0.5
4,436,820	-		Psest_4251	0.17	-1.5
4,436,820	-		Psest_4251	0.17	-0.2
4,436,820	-		Psest_4251	0.17	-0.4
4,436,820	-		Psest_4251	0.17	-1.6
4,436,905	+		Psest_4251	0.20	+1.9
4,436,921	+		Psest_4251	0.21	-2.3
4,436,954	+		Psest_4251	0.22	+0.1
4,436,954	+		Psest_4251	0.22	-1.6
4,436,955	-		Psest_4251	0.22	-0.6
4,437,124	+		Psest_4251	0.28	-0.9
4,437,124	+		Psest_4251	0.28	-2.1
4,437,124	+		Psest_4251	0.28	+0.4
4,437,124	+		Psest_4251	0.28	-0.3
4,437,124	+		Psest_4251	0.28	-2.6
4,437,125	-		Psest_4251	0.28	+0.9
4,437,125	-		Psest_4251	0.28	-0.6
4,437,125	-		Psest_4251	0.28	-2.0
4,437,125	-		Psest_4251	0.28	-2.1
4,437,149	+		Psest_4251	0.29	-1.2
4,437,150	-		Psest_4251	0.29	-0.2
4,437,150	-		Psest_4251	0.29	-1.4
4,437,189	+		Psest_4251	0.30	-1.4
4,437,189	+		Psest_4251	0.30	-0.2
4,437,189	+		Psest_4251	0.30	-0.8
4,437,189	+		Psest_4251	0.30	-1.0
4,437,189	+		Psest_4251	0.30	-1.1
4,437,189	+		Psest_4251	0.30	-0.6
4,437,189	+		Psest_4251	0.30	-0.6
4,437,190	-		Psest_4251	0.30	-0.5
4,437,190	-		Psest_4251	0.30	+0.9
4,437,190	-		Psest_4251	0.30	+0.4
4,437,190	-		Psest_4251	0.30	-2.8
4,437,190	-		Psest_4251	0.30	+0.4
4,437,190	-		Psest_4251	0.30	-1.1
4,437,190	-		Psest_4251	0.30	-1.2
4,437,190	-		Psest_4251	0.30	-2.0
4,437,190	-		Psest_4251	0.30	-0.2
4,437,190	-		Psest_4251	0.30	+0.7
4,437,213	+		Psest_4251	0.31	-0.4
4,437,265	+		Psest_4251	0.33	-0.6
4,437,265	+		Psest_4251	0.33	-1.9
4,437,265	+		Psest_4251	0.33	-0.2
4,437,265	+		Psest_4251	0.33	-1.1
4,437,265	+		Psest_4251	0.33	-1.6
4,437,266	-		Psest_4251	0.33	-0.7
4,437,266	-		Psest_4251	0.33	+0.9
4,437,266	-		Psest_4251	0.33	-0.2
4,437,266	-		Psest_4251	0.33	-1.1
4,437,266	-		Psest_4251	0.33	-0.6
4,437,266	-		Psest_4251	0.33	-1.6