Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_4084

Experiment: butyrate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	butyrate (C)
4,258,206	+		Psest_4083	0.17	-2.5
4,258,206	+		Psest_4083	0.17	-1.5
4,258,206	+		Psest_4083	0.17	+0.5
4,258,428	+		Psest_4083	0.40	+0.9
4,258,429	-		Psest_4083	0.40	-0.8
4,258,429	-		Psest_4083	0.40	+0.2
4,258,627	+		Psest_4083	0.61	-2.2
4,258,627	+		Psest_4083	0.61	-0.9
4,258,627	+		Psest_4083	0.61	-0.3
4,258,628	-		Psest_4083	0.61	-0.0
4,258,628	-		Psest_4083	0.61	+1.8
4,258,628	-		Psest_4083	0.61	-0.3
4,258,628	-		Psest_4083	0.61	-1.7
4,258,628	-		Psest_4083	0.61	+0.2
4,258,628	-		Psest_4083	0.61	-0.8
4,258,628	-		Psest_4083	0.61	+0.4
4,258,629	+		Psest_4083	0.62	-1.5
4,258,629	+		Psest_4083	0.62	+0.7
4,258,629	+		Psest_4083	0.62	-0.6
4,258,629	+		Psest_4083	0.62	-0.4
4,258,629	+		Psest_4083	0.62	+3.9
4,258,629	+		Psest_4083	0.62	-0.4
4,258,629	+		Psest_4083	0.62	+0.7
4,258,629	+		Psest_4083	0.62	-0.8
4,258,629	+		Psest_4083	0.62	+1.6
4,258,629	+		Psest_4083	0.62	+0.3
4,258,629	+		Psest_4083	0.62	+0.2
4,258,629	+		Psest_4083	0.62	-0.5
4,258,629	+		Psest_4083	0.62	-1.1
4,258,629	+		Psest_4083	0.62	-1.5
4,258,629	+		Psest_4083	0.62	-2.7
4,258,629	+		Psest_4083	0.62	-2.2
4,258,629	+		Psest_4083	0.62	-0.6
4,258,629	+		Psest_4083	0.62	-0.1
4,258,629	+		Psest_4083	0.62	-1.0
4,258,629	+		Psest_4083	0.62	-0.4
4,258,629	+		Psest_4083	0.62	-1.0
4,258,629	+		Psest_4083	0.62	-1.3
4,258,629	+		Psest_4083	0.62	-0.7
4,258,629	+		Psest_4083	0.62	-0.6
4,258,629	+		Psest_4083	0.62	-0.5
4,258,629	+		Psest_4083	0.62	-1.3
4,258,629	+		Psest_4083	0.62	-1.3
4,258,629	+		Psest_4083	0.62	-2.5
4,258,629	+		Psest_4083	0.62	+0.1
4,258,629	+		Psest_4083	0.62	+2.0
4,258,629	+		Psest_4083	0.62	+0.6
4,258,629	+		Psest_4083	0.62	+0.2
4,258,629	+		Psest_4083	0.62	+0.1
4,258,629	+		Psest_4083	0.62	+0.1
4,258,629	+		Psest_4083	0.62	+0.4
4,258,629	+		Psest_4083	0.62	-2.0
4,258,629	+		Psest_4083	0.62	-1.3
4,258,629	+		Psest_4083	0.62	-0.5
4,258,629	+		Psest_4083	0.62	+0.2
4,258,629	+		Psest_4083	0.62	-0.0
4,258,629	+		Psest_4083	0.62	-0.7
4,258,629	+		Psest_4083	0.62	-0.6
4,258,629	+		Psest_4083	0.62	+0.6
4,258,629	+		Psest_4083	0.62	-1.9
4,258,630	-		Psest_4083	0.62	-0.6
4,258,630	-		Psest_4083	0.62	+1.1
4,258,630	-		Psest_4083	0.62	+0.8
4,258,630	-		Psest_4083	0.62	-1.7
4,258,630	-		Psest_4083	0.62	-0.3
4,258,630	-		Psest_4083	0.62	-1.1
4,258,630	-		Psest_4083	0.62	-0.0
4,258,630	-		Psest_4083	0.62	-0.7
4,258,630	-		Psest_4083	0.62	+0.2
4,258,630	-		Psest_4083	0.62	-0.0
4,258,630	-		Psest_4083	0.62	+1.0
4,258,630	-		Psest_4083	0.62	+0.4
4,258,630	-		Psest_4083	0.62	+1.1
4,258,630	-		Psest_4083	0.62	-0.3
4,258,630	-		Psest_4083	0.62	+1.0
4,258,630	-		Psest_4083	0.62	-0.1
4,258,630	-		Psest_4083	0.62	+1.0
4,258,630	-		Psest_4083	0.62	+0.5
4,258,630	-		Psest_4083	0.62	-0.6
4,258,630	-		Psest_4083	0.62	-0.2
4,258,630	-		Psest_4083	0.62	-0.3
4,258,630	-		Psest_4083	0.62	-0.5
4,258,630	-		Psest_4083	0.62	+0.0
4,258,630	-		Psest_4083	0.62	+0.4
4,258,630	-		Psest_4083	0.62	-0.5
4,258,630	-		Psest_4083	0.62	-0.1
4,258,630	-		Psest_4083	0.62	-0.8
4,258,630	-		Psest_4083	0.62	-0.2
4,258,630	-		Psest_4083	0.62	-0.8
4,258,630	-		Psest_4083	0.62	-0.0
4,258,630	-		Psest_4083	0.62	+0.3
4,258,630	-		Psest_4083	0.62	+0.5
4,258,630	-		Psest_4083	0.62	-0.8
4,258,630	-		Psest_4083	0.62	-0.9
4,258,630	-		Psest_4083	0.62	-1.4
4,258,662	+		Psest_4083	0.65	-1.9
4,258,662	+		Psest_4083	0.65	+0.2
4,258,662	+		Psest_4083	0.65	-0.6
4,258,662	+		Psest_4083	0.65	-0.6
4,258,662	+		Psest_4083	0.65	-1.4
4,258,684	+		Psest_4083	0.67	-0.1
4,258,704	+		Psest_4083	0.70	-0.6
4,258,704	+		Psest_4083	0.70	-0.2
4,258,705	-		Psest_4083	0.70	-1.7
4,258,705	-		Psest_4083	0.70	-1.0
4,258,889	-		Psest_4083	0.89	+0.0
4,258,903	-				+0.8
4,258,992	+				-2.3
4,258,992	+				-2.0
4,258,992	+				-1.2
4,258,992	+				-1.7
4,258,992	+				-1.7
4,258,992	+				-1.0
4,258,992	+				-1.3
4,258,992	+				-0.5
4,258,992	+				-2.8
4,258,992	+				+1.6
4,258,992	+				-0.8
4,258,992	+				-1.5
4,258,992	+				+2.0
4,258,992	+				-2.5
4,258,992	+				-1.2
4,258,992	+				-1.7
4,258,992	+				-1.6
4,258,992	+				-0.6
4,258,992	+				-0.3
4,258,992	+				-1.2
4,258,992	+				-1.1
4,258,992	+				-0.9
4,258,992	+				-0.0
4,258,992	+				+0.2
4,258,992	+				-1.7
4,258,993	-				-0.3
4,258,993	-				+0.3
4,258,993	-				+0.1
4,258,993	-				-0.1
4,258,993	-				-1.0
4,258,993	-				+0.6
4,258,993	-				+2.0
4,258,993	-				+1.2
4,258,993	-				+1.0
4,258,993	-				+0.4
4,258,993	-				+0.6
4,258,993	-				-0.8
4,258,993	-				+0.3
4,258,993	-				-0.2
4,258,993	-				-0.3
4,258,993	-				+1.4
4,259,031	-				-0.5
4,259,203	-				+0.2
4,259,497	+		Psest_4084	0.17	+0.6
4,259,497	+		Psest_4084	0.17	-1.5
4,259,497	+		Psest_4084	0.17	-1.2
4,259,497	+		Psest_4084	0.17	-0.4
4,259,498	-		Psest_4084	0.17	+0.6
4,259,498	-				+0.4
4,259,551	+		Psest_4084	0.20	-0.3
4,259,551	+		Psest_4084	0.20	-0.5
4,259,707	+		Psest_4084	0.29	-0.8
4,259,708	-		Psest_4084	0.29	-0.7
4,259,708	-		Psest_4084	0.29	+0.1
4,259,708	-		Psest_4084	0.29	+0.6
4,259,715	+		Psest_4084	0.29	-0.1
4,259,715	+		Psest_4084	0.29	-1.8
4,259,716	-		Psest_4084	0.29	-0.6
4,259,716	-		Psest_4084	0.29	+0.7
4,259,716	-		Psest_4084	0.29	-0.8
4,259,716	-		Psest_4084	0.29	-0.2
4,259,884	+		Psest_4084	0.39	-1.9
4,259,884	+		Psest_4084	0.39	+0.5
4,259,884	+		Psest_4084	0.39	-1.8
4,259,884	+		Psest_4084	0.39	-1.0
4,259,884	+		Psest_4084	0.39	+0.7
4,259,887	+		Psest_4084	0.39	+1.0
4,259,887	+		Psest_4084	0.39	-0.4
4,259,887	+		Psest_4084	0.39	-1.3
4,259,887	+		Psest_4084	0.39	-1.5
4,259,887	+		Psest_4084	0.39	-0.3
4,259,887	+		Psest_4084	0.39	+4.1
4,259,887	+		Psest_4084	0.39	-0.6
4,259,887	+		Psest_4084	0.39	-0.0
4,259,887	+		Psest_4084	0.39	-1.1
4,259,888	-		Psest_4084	0.39	+0.2
4,259,888	-		Psest_4084	0.39	+0.5
4,259,888	-		Psest_4084	0.39	-0.3
4,259,888	-		Psest_4084	0.39	-0.2
4,259,888	-		Psest_4084	0.39	-0.4
4,259,888	-		Psest_4084	0.39	-0.5
4,259,888	-		Psest_4084	0.39	-0.0
4,259,888	-		Psest_4084	0.39	-0.0
4,259,888	-		Psest_4084	0.39	-0.0
4,259,915	-		Psest_4084	0.40	+0.4
4,260,157	+		Psest_4084	0.54	+0.7
4,260,157	+		Psest_4084	0.54	+1.0
4,260,157	+		Psest_4084	0.54	-0.4
4,260,158	-		Psest_4084	0.54	-2.6
4,260,158	-		Psest_4084	0.54	-2.4
4,260,158	-		Psest_4084	0.54	-0.5
4,260,175	+		Psest_4084	0.55	+0.3
4,260,175	+		Psest_4084	0.55	+1.2
4,260,175	+		Psest_4084	0.55	+1.3
4,260,175	+		Psest_4084	0.55	+0.6
4,260,175	+		Psest_4084	0.55	+0.5
4,260,175	+		Psest_4084	0.55	-0.0
4,260,175	+		Psest_4084	0.55	+0.5
4,260,175	+		Psest_4084	0.55	+0.7
4,260,176	-		Psest_4084	0.55	-1.8
4,260,176	-		Psest_4084	0.55	-0.9
4,260,181	+		Psest_4084	0.55	-0.7
4,260,181	+		Psest_4084	0.55	-0.3
4,260,181	+		Psest_4084	0.55	+0.7
4,260,181	+		Psest_4084	0.55	+1.9
4,260,181	+		Psest_4084	0.55	+0.7
4,260,181	+		Psest_4084	0.55	+0.0
4,260,182	-		Psest_4084	0.55	-1.6
4,260,182	-		Psest_4084	0.55	-0.0
4,260,182	-		Psest_4084	0.55	+0.4
4,260,182	-		Psest_4084	0.55	-0.4
4,260,554	-		Psest_4084	0.76	-0.2
4,260,554	-		Psest_4084	0.76	-0.7
4,260,554	-		Psest_4084	0.76	-0.1
4,260,617	+		Psest_4084	0.79	-0.6
4,260,709	+		Psest_4084	0.84	-0.6
4,260,709	+		Psest_4084	0.84	+0.1
4,260,709	+		Psest_4084	0.84	+0.6
4,260,710	-		Psest_4084	0.84	+0.5
4,261,079	+				-2.9
4,261,080	-				-1.2
4,261,080	-				-1.9
4,261,080	-				-1.2
4,261,163	+		Psest_4085	0.11	-1.2
4,261,163	+		Psest_4085	0.11	+0.2
4,261,164	-		Psest_4085	0.11	-2.0
4,261,166	+		Psest_4085	0.11	+1.4
4,261,166	+		Psest_4085	0.11	+0.2
4,261,166	+		Psest_4085	0.11	+1.6
4,261,166	+		Psest_4085	0.11	+0.2
4,261,166	+		Psest_4085	0.11	+0.3
4,261,166	+		Psest_4085	0.11	-1.2
4,261,166	+		Psest_4085	0.11	+0.3
4,261,166	+		Psest_4085	0.11	-2.7
4,261,167	-		Psest_4085	0.11	-0.6
4,261,167	-		Psest_4085	0.11	-0.2
4,261,167	-		Psest_4085	0.11	-1.3
4,261,167	-		Psest_4085	0.11	-1.2
4,261,167	-		Psest_4085	0.11	-1.2
4,261,283	+		Psest_4085	0.20	+1.1
4,261,283	+		Psest_4085	0.20	+0.2
4,261,287	-		Psest_4085	0.20	-1.7
4,261,302	-		Psest_4085	0.21	-0.0
4,261,310	+		Psest_4085	0.21	-0.4
4,261,310	+		Psest_4085	0.21	+1.2
4,261,310	+		Psest_4085	0.21	-0.2
4,261,310	+		Psest_4085	0.21	-0.5
4,261,310	+		Psest_4085	0.21	-0.3
4,261,311	-		Psest_4085	0.22	-0.8
4,261,311	-		Psest_4085	0.22	-1.4
4,261,311	-		Psest_4085	0.22	+0.2
4,261,352	+		Psest_4085	0.24	-0.3
4,261,352	+		Psest_4085	0.24	-1.5
4,261,352	+		Psest_4085	0.24	+0.1
4,261,353	-		Psest_4085	0.25	-2.0
4,261,353	-		Psest_4085	0.25	-1.4
4,261,355	+		Psest_4085	0.25	-0.6
4,261,574	+		Psest_4085	0.40	-0.6
4,261,574	+		Psest_4085	0.40	-0.7
4,261,574	+		Psest_4085	0.40	+1.3
4,261,574	+		Psest_4085	0.40	-0.5
4,261,574	+		Psest_4085	0.40	+0.5
4,261,574	+		Psest_4085	0.40	+0.1
4,261,575	-		Psest_4085	0.40	+1.5
4,261,575	-		Psest_4085	0.40	-0.4
4,261,575	-		Psest_4085	0.40	+0.3
4,261,575	-		Psest_4085	0.40	-2.1
4,261,575	-		Psest_4085	0.40	-2.6
4,261,664	+		Psest_4085	0.46	+0.9
4,261,664	+		Psest_4085	0.46	+2.4
4,261,665	-		Psest_4085	0.47	-1.1
4,261,665	-		Psest_4085	0.47	-1.3
4,261,665	-		Psest_4085	0.47	-1.6
4,261,665	-		Psest_4085	0.47	+0.2
4,261,665	-		Psest_4085	0.47	-2.4
4,261,801	-		Psest_4085	0.56	-1.5
4,261,923	+		Psest_4085	0.65	-1.2
4,261,924	-		Psest_4085	0.65	+1.0
4,261,924	-		Psest_4085	0.65	-1.6