Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3981

Experiment: butyrate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	butyrate (C)
4,147,951	+		Psest_3979	0.84	-0.5
4,147,952	-		Psest_3979	0.84	-2.3
4,147,952	-		Psest_3979	0.84	+0.6
4,148,462	+		Psest_3980	0.71	+1.4
4,148,558	+				-0.7
4,148,558	+				+1.7
4,148,558	+				-1.9
4,148,558	+				-0.8
4,148,558	+				-2.1
4,148,586	-				+0.5
4,148,586	-				-2.2
4,148,591	+				+0.8
4,148,600	+				-0.4
4,148,600	+				+0.6
4,148,600	+				-0.8
4,148,600	+				-1.0
4,148,601	-				-0.4
4,148,601	-				+0.4
4,148,601	-				-1.3
4,148,601	-				+1.3
4,148,601	-				+0.4
4,148,609	+				+0.6
4,148,609	+				-0.0
4,148,609	+				-0.5
4,148,609	+				-0.5
4,148,609	+				-2.1
4,148,609	+				-1.3
4,148,609	+				+0.3
4,148,610	-				+0.6
4,148,610	-				+0.6
4,148,610	-				+0.6
4,148,610	-				-0.0
4,148,610	-				-1.3
4,148,610	-				+0.4
4,148,610	-				+0.4
4,148,610	-				+1.0
4,148,610	-				+0.0
4,148,613	+				+0.7
4,148,613	+				+0.7
4,148,613	+				-0.2
4,148,613	+				+1.1
4,148,614	-				+0.2
4,148,614	-				-0.4
4,148,614	-				-0.5
4,148,614	-				+0.0
4,148,614	-				+1.4
4,148,614	-				-0.6
4,148,614	-				+0.7
4,148,614	-				+0.0
4,148,614	-				-0.4
4,148,614	-				-0.0
4,148,614	-				-0.3
4,148,614	-				+0.4
4,148,614	-				-0.2
4,148,616	+				-1.5
4,148,616	+				+0.5
4,148,616	+				+1.4
4,148,616	+				-2.2
4,148,616	+				-0.5
4,148,617	-				+0.8
4,148,617	-				-0.9
4,148,617	-				+0.1
4,148,708	+				+0.1
4,148,708	+				-0.6
4,148,709	-				+0.0
4,148,709	-				+0.0
4,148,709	-				+0.2
4,148,760	-				+0.4
4,148,760	-				-0.3
4,148,760	-				+0.6
4,148,804	+		Psest_3981	0.15	+2.4
4,148,804	+		Psest_3981	0.15	+1.3
4,148,804	+		Psest_3981	0.15	+1.0
4,148,805	-		Psest_3981	0.15	+0.3
4,148,957	+		Psest_3981	0.42	+0.3
4,148,958	-		Psest_3981	0.42	-0.2
4,148,990	+		Psest_3981	0.47	-1.3
4,149,008	+		Psest_3981	0.50	+0.0
4,149,008	+		Psest_3981	0.50	-0.3
4,149,008	+		Psest_3981	0.50	-2.1
4,149,008	+		Psest_3981	0.50	-1.1
4,149,008	+		Psest_3981	0.50	-1.0
4,149,008	+		Psest_3981	0.50	-0.2
4,149,009	-		Psest_3981	0.51	+0.0
4,149,009	-		Psest_3981	0.51	+1.0
4,149,009	-		Psest_3981	0.51	-0.9
4,149,015	+		Psest_3981	0.52	-0.4
4,149,015	+		Psest_3981	0.52	-1.3
4,149,015	+		Psest_3981	0.52	+0.6
4,149,016	-		Psest_3981	0.52	-1.6
4,149,016	-		Psest_3981	0.52	+0.2
4,149,016	-		Psest_3981	0.52	-0.9
4,149,017	+		Psest_3981	0.52	-0.4
4,149,017	+		Psest_3981	0.52	+0.7
4,149,017	+		Psest_3981	0.52	-0.7
4,149,017	+		Psest_3981	0.52	+0.7
4,149,017	+		Psest_3981	0.52	-0.0
4,149,017	+		Psest_3981	0.52	-2.1
4,149,017	+		Psest_3981	0.52	-1.3
4,149,017	+		Psest_3981	0.52	+0.1
4,149,017	+		Psest_3981	0.52	-0.2
4,149,017	+		Psest_3981	0.52	-1.1
4,149,017	+		Psest_3981	0.52	-0.6
4,149,017	+		Psest_3981	0.52	-2.1
4,149,017	+		Psest_3981	0.52	+1.0
4,149,017	+		Psest_3981	0.52	-0.1
4,149,017	+		Psest_3981	0.52	-0.9
4,149,017	+		Psest_3981	0.52	-0.8
4,149,017	+		Psest_3981	0.52	+0.1
4,149,017	+		Psest_3981	0.52	-1.3
4,149,017	+		Psest_3981	0.52	+0.7
4,149,017	+		Psest_3981	0.52	-1.3
4,149,017	+		Psest_3981	0.52	-1.9
4,149,018	-		Psest_3981	0.52	+1.6
4,149,018	-		Psest_3981	0.52	-2.1
4,149,018	-		Psest_3981	0.52	-2.7
4,149,018	-		Psest_3981	0.52	-0.1
4,149,018	-		Psest_3981	0.52	+0.1
4,149,018	-		Psest_3981	0.52	-2.4
4,149,018	-		Psest_3981	0.52	-1.6
4,149,018	-		Psest_3981	0.52	+0.3
4,149,018	-		Psest_3981	0.52	-1.1
4,149,018	-		Psest_3981	0.52	-1.2
4,149,018	-		Psest_3981	0.52	-0.6
4,149,018	-		Psest_3981	0.52	+0.0
4,149,018	-		Psest_3981	0.52	-1.8
4,149,018	-		Psest_3981	0.52	+0.2
4,149,018	-		Psest_3981	0.52	-0.6
4,149,018	-		Psest_3981	0.52	-0.5
4,149,018	-		Psest_3981	0.52	-0.3
4,149,018	-		Psest_3981	0.52	-0.4
4,149,018	-		Psest_3981	0.52	-0.7
4,149,018	-		Psest_3981	0.52	-1.7
4,149,018	-		Psest_3981	0.52	-0.3
4,149,018	-		Psest_3981	0.52	-1.6
4,149,018	-		Psest_3981	0.52	-1.1
4,149,018	-		Psest_3981	0.52	-0.8
4,149,042	+		Psest_3981	0.56	+1.6
4,149,050	+		Psest_3981	0.58	+2.7
4,149,050	+		Psest_3981	0.58	+0.1
4,149,050	+		Psest_3981	0.58	+0.4
4,149,050	+		Psest_3981	0.58	-1.4
4,149,050	+		Psest_3981	0.58	+0.6
4,149,050	+		Psest_3981	0.58	+1.7
4,149,050	+		Psest_3981	0.58	+0.2
4,149,050	+		Psest_3981	0.58	-0.0
4,149,050	+		Psest_3981	0.58	-0.8
4,149,050	+		Psest_3981	0.58	-0.8
4,149,050	+		Psest_3981	0.58	+0.4
4,149,050	+		Psest_3981	0.58	+0.7
4,149,050	+		Psest_3981	0.58	+0.3
4,149,050	+		Psest_3981	0.58	-0.4
4,149,050	+		Psest_3981	0.58	-0.7
4,149,051	-		Psest_3981	0.58	-0.9
4,149,051	-		Psest_3981	0.58	-0.7
4,149,051	-		Psest_3981	0.58	-0.7
4,149,051	-		Psest_3981	0.58	+1.0
4,149,051	-		Psest_3981	0.58	-0.4
4,149,051	-		Psest_3981	0.58	-0.4
4,149,051	-		Psest_3981	0.58	+0.6
4,149,051	-		Psest_3981	0.58	-1.0
4,149,051	-		Psest_3981	0.58	-2.0
4,149,051	-		Psest_3981	0.58	+1.0
4,149,051	-		Psest_3981	0.58	-0.4
4,149,051	-		Psest_3981	0.58	-1.1
4,149,051	-		Psest_3981	0.58	-2.1
4,149,051	-		Psest_3981	0.58	-0.1
4,149,057	+		Psest_3981	0.59	+0.1
4,149,057	+		Psest_3981	0.59	+0.6
4,149,057	+		Psest_3981	0.59	-1.3
4,149,057	+		Psest_3981	0.59	-1.0
4,149,057	+		Psest_3981	0.59	-2.1
4,149,057	+		Psest_3981	0.59	+0.0
4,149,058	-		Psest_3981	0.59	-1.7
4,149,058	-		Psest_3981	0.59	-0.7
4,149,058	-		Psest_3981	0.59	-0.7
4,149,058	-		Psest_3981	0.59	-0.8
4,149,061	+		Psest_3981	0.60	+0.2
4,149,062	-		Psest_3981	0.60	-1.3
4,149,137	+		Psest_3981	0.73	+0.5
4,149,137	+		Psest_3981	0.73	-1.1
4,149,137	+		Psest_3981	0.73	-0.8
4,149,138	-		Psest_3981	0.73	-1.3
4,149,309	+				-1.4
4,149,309	+				+0.4
4,149,430	+				-2.1
4,149,431	-				+0.1
4,149,522	-		Psest_3982	0.14	+0.2
4,149,522	-		Psest_3982	0.14	-1.6
4,149,522	-		Psest_3982	0.14	+0.8
4,149,554	+		Psest_3982	0.17	-0.3
4,149,554	+		Psest_3982	0.17	-0.1
4,149,554	+		Psest_3982	0.17	-0.5
4,149,554	+		Psest_3982	0.17	-0.8
4,149,554	+		Psest_3982	0.17	-2.0
4,149,555	-		Psest_3982	0.17	-2.1
4,149,555	-		Psest_3982	0.17	-0.5
4,149,555	-		Psest_3982	0.17	+0.5
4,149,555	-		Psest_3982	0.17	-2.2
4,149,555	-		Psest_3982	0.17	-1.1
4,149,555	-		Psest_3982	0.17	-0.1
4,149,555	-		Psest_3982	0.17	-1.2
4,149,555	-		Psest_3982	0.17	-0.7
4,149,555	-		Psest_3982	0.17	-2.5
4,149,555	-		Psest_3982	0.17	+0.4
4,149,555	-		Psest_3982	0.17	-1.5
4,149,555	-		Psest_3982	0.17	+0.1
4,149,555	-		Psest_3982	0.17	+0.5
4,149,555	-		Psest_3982	0.17	-0.8
4,149,555	-		Psest_3982	0.17	-1.4
4,149,555	-		Psest_3982	0.17	-0.9
4,149,555	-		Psest_3982	0.17	+0.4
4,149,555	-		Psest_3982	0.17	+0.0
4,149,614	+		Psest_3982	0.21	+0.2
4,149,652	+		Psest_3982	0.24	+0.8
4,149,888	+		Psest_3982	0.42	-2.9
4,149,889	-		Psest_3982	0.42	+0.5
4,149,936	-		Psest_3982	0.46	-1.2
4,150,058	+		Psest_3982	0.55	+0.0
4,150,058	+		Psest_3982	0.55	-0.9
4,150,058	+		Psest_3982	0.55	-0.8
4,150,059	-		Psest_3982	0.55	+1.3
4,150,059	-		Psest_3982	0.55	+0.6
4,150,059	-		Psest_3982	0.55	+2.2
4,150,274	+		Psest_3982	0.71	-1.1
4,150,274	+		Psest_3982	0.71	-1.6
4,150,274	+		Psest_3982	0.71	-0.5
4,150,274	+		Psest_3982	0.71	-1.8
4,150,275	-		Psest_3982	0.72	+0.9
4,150,275	-		Psest_3982	0.72	-0.1
4,150,275	-		Psest_3982	0.72	+1.5
4,150,292	+		Psest_3982	0.73	+0.9
4,150,292	+		Psest_3982	0.73	-0.2
4,150,293	-		Psest_3982	0.73	+0.1
4,150,293	-		Psest_3982	0.73	+0.8
4,150,293	-		Psest_3982	0.73	+1.4
4,150,293	-		Psest_3982	0.73	+0.9
4,150,293	-		Psest_3982	0.73	+0.3