Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c35730

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
3,745,877	+		PGA1_c35710	0.90	-1.8
3,745,885	-				-3.8
3,745,915	-				-0.3
3,745,957	+				-2.4
3,745,965	-				-2.0
3,745,967	+				+0.1
3,745,972	-				+0.3
3,746,029	-				-0.7
3,746,029	-				-0.1
3,746,041	-				-3.3
3,746,043	+				-1.2
3,746,051	-				+0.0
3,746,130	-				-0.9
3,746,181	+		PGA1_c35720	0.12	-1.4
3,746,225	+		PGA1_c35720	0.18	-1.4
3,746,225	+		PGA1_c35720	0.18	-0.8
3,746,271	+		PGA1_c35720	0.23	-1.5
3,746,422	+		PGA1_c35720	0.43	-0.9
3,746,422	+		PGA1_c35720	0.43	-1.4
3,746,422	+		PGA1_c35720	0.43	-0.6
3,746,488	+		PGA1_c35720	0.51	-1.8
3,746,496	-		PGA1_c35720	0.52	-0.4
3,746,528	-		PGA1_c35720	0.56	-3.7
3,746,555	-		PGA1_c35720	0.60	+0.3
3,746,590	+		PGA1_c35720	0.64	-1.5
3,746,598	-		PGA1_c35720	0.65	-0.4
3,746,603	+		PGA1_c35720	0.66	-1.9
3,746,634	+		PGA1_c35720	0.70	-1.5
3,746,689	+		PGA1_c35720	0.77	-1.2
3,746,697	-		PGA1_c35720	0.78	-1.8
3,746,703	+		PGA1_c35720	0.79	-0.5
3,746,707	-		PGA1_c35720	0.79	-0.7
3,746,708	+		PGA1_c35720	0.79	-0.9
3,746,711	-		PGA1_c35720	0.80	-0.2
3,746,729	+		PGA1_c35720	0.82	-0.4
3,746,757	-		PGA1_c35720	0.86	+0.1
3,746,770	-		PGA1_c35720	0.87	-1.5
3,746,816	-				-2.8
3,746,894	-				-1.4
3,746,903	-				-2.8
3,746,911	-				-0.5
3,746,939	+				-3.0
3,746,959	+				+1.2
3,746,964	-				+1.5
3,747,017	-		PGA1_c35730	0.14	-0.7
3,747,034	-		PGA1_c35730	0.16	+0.5
3,747,050	+		PGA1_c35730	0.17	-2.8
3,747,063	-		PGA1_c35730	0.18	-0.1
3,747,138	+		PGA1_c35730	0.25	-1.3
3,747,146	-		PGA1_c35730	0.26	-0.0
3,747,189	+		PGA1_c35730	0.30	+0.2
3,747,208	+		PGA1_c35730	0.32	-1.4
3,747,208	+		PGA1_c35730	0.32	+0.2
3,747,215	+		PGA1_c35730	0.33	-1.1
3,747,220	+		PGA1_c35730	0.33	-3.4
3,747,220	+		PGA1_c35730	0.33	-1.3
3,747,271	+		PGA1_c35730	0.38	-1.6
3,747,277	+		PGA1_c35730	0.38	-0.5
3,747,328	+		PGA1_c35730	0.43	-2.6
3,747,401	-		PGA1_c35730	0.50	-0.8
3,747,472	+		PGA1_c35730	0.56	-1.5
3,747,474	+		PGA1_c35730	0.56	-0.9
3,747,524	+		PGA1_c35730	0.61	-2.9
3,747,556	+		PGA1_c35730	0.64	-1.4
3,747,574	-		PGA1_c35730	0.66	-0.2
3,747,583	+		PGA1_c35730	0.67	-0.6
3,747,625	+		PGA1_c35730	0.70	-2.9
3,747,625	+		PGA1_c35730	0.70	+0.2
3,747,626	+		PGA1_c35730	0.71	-1.5
3,747,626	+		PGA1_c35730	0.71	-0.8
3,747,626	+		PGA1_c35730	0.71	-0.7
3,747,626	+		PGA1_c35730	0.71	-2.5
3,747,700	+		PGA1_c35730	0.77	-0.9
3,747,732	-		PGA1_c35730	0.80	-0.9
3,747,736	+		PGA1_c35730	0.81	+0.0
3,747,754	+		PGA1_c35730	0.82	+1.7
3,747,925	+				-1.0
3,747,925	+				-0.3
3,747,932	+				-0.4
3,747,933	-				-0.4
3,747,976	-				-0.9
3,747,977	+				-0.8
3,748,019	-		PGA1_c35740	0.19	-1.4
3,748,085	+		PGA1_c35740	0.35	-2.2
3,748,100	+		PGA1_c35740	0.39	-1.5
3,748,103	-		PGA1_c35740	0.40	+0.1
3,748,108	-		PGA1_c35740	0.41	-1.1
3,748,155	-		PGA1_c35740	0.53	-3.0
3,748,157	+		PGA1_c35740	0.53	-1.8
3,748,228	-		PGA1_c35740	0.71	-0.5
3,748,239	+		PGA1_c35740	0.74	-1.0
3,748,258	+		PGA1_c35740	0.78	-0.4
3,748,258	+		PGA1_c35740	0.78	-0.6
3,748,258	+		PGA1_c35740	0.78	-0.2
3,748,266	-		PGA1_c35740	0.80	-0.6
3,748,266	-		PGA1_c35740	0.80	+0.3
3,748,315	+				+0.0
3,748,350	+				+0.6
3,748,379	+				+0.9
3,748,406	+				+1.3
3,748,406	+				-0.9
3,748,406	+				-0.4
3,748,411	+				-1.1
3,748,475	-		PGA1_c35750	0.11	+0.8
3,748,481	+		PGA1_c35750	0.12	-2.6
3,748,481	+		PGA1_c35750	0.12	+1.5
3,748,489	-		PGA1_c35750	0.14	+0.2
3,748,491	+		PGA1_c35750	0.14	-1.1
3,748,499	-		PGA1_c35750	0.16	-0.4
3,748,509	-		PGA1_c35750	0.18	-0.6
3,748,535	+		PGA1_c35750	0.24	-1.8
3,748,535	+		PGA1_c35750	0.24	-1.6
3,748,535	+		PGA1_c35750	0.24	-1.1
3,748,535	+		PGA1_c35750	0.24	-0.8
3,748,535	+		PGA1_c35750	0.24	-2.8
3,748,535	+		PGA1_c35750	0.24	-0.9
3,748,535	+		PGA1_c35750	0.24	+0.4
3,748,535	+		PGA1_c35750	0.24	-2.5
3,748,535	+		PGA1_c35750	0.24	-0.2
3,748,543	-		PGA1_c35750	0.25	-0.4
3,748,543	-		PGA1_c35750	0.25	-2.0
3,748,603	+		PGA1_c35750	0.38	-1.1
3,748,603	+		PGA1_c35750	0.38	-1.2
3,748,603	+		PGA1_c35750	0.38	-0.6
3,748,603	+		PGA1_c35750	0.38	-0.2
3,748,611	-		PGA1_c35750	0.39	-1.8
3,748,642	-		PGA1_c35750	0.46	-1.7
3,748,662	-		PGA1_c35750	0.50	+0.9
3,748,662	-		PGA1_c35750	0.50	-1.4
3,748,672	+		PGA1_c35750	0.52	-0.5
3,748,672	-		PGA1_c35750	0.52	-1.0
3,748,685	-		PGA1_c35750	0.55	-1.9
3,748,685	-		PGA1_c35750	0.55	-1.9
3,748,687	+		PGA1_c35750	0.55	-2.7
3,748,692	-		PGA1_c35750	0.56	-2.6
3,748,747	-		PGA1_c35750	0.67	+1.0
3,748,765	+		PGA1_c35750	0.71	-0.1
3,748,765	+		PGA1_c35750	0.71	-2.4
3,748,821	-		PGA1_c35750	0.83	+0.1