Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c35520

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
3,722,356	+		PGA1_c35510	0.54	-0.3
3,722,751	+		PGA1_c35510	0.83	-2.4
3,722,929	-				-3.1
3,723,112	-				-1.1
3,723,119	+				-3.1
3,723,164	-		PGA1_c35520	0.11	-1.0
3,723,253	+		PGA1_c35520	0.17	-0.2
3,723,341	+		PGA1_c35520	0.23	+0.6
3,723,575	+		PGA1_c35520	0.38	-0.5
3,723,591	+		PGA1_c35520	0.39	-1.3
3,723,665	+		PGA1_c35520	0.44	-1.2
3,723,714	+		PGA1_c35520	0.47	-0.6
3,723,714	+		PGA1_c35520	0.47	-2.1
3,723,839	+		PGA1_c35520	0.55	-2.4
3,723,915	+		PGA1_c35520	0.60	-1.1
3,723,915	+		PGA1_c35520	0.60	-2.0
3,723,923	-		PGA1_c35520	0.61	-1.2
3,724,002	-		PGA1_c35520	0.66	-3.1
3,724,095	-		PGA1_c35520	0.72	-0.9
3,724,290	-		PGA1_c35520	0.85	+0.4
3,724,371	+				+1.7
3,724,376	+				+0.5
3,724,466	+				+0.6
3,724,474	-				+0.3
3,724,543	+				-1.9
3,724,545	-				-1.6
3,724,573	+				-2.1
3,724,578	+				-0.2
3,724,578	+				+0.3
3,724,581	-				-0.4
3,724,581	-				+0.3
3,724,588	+				+1.2
3,724,591	-				-0.4
3,724,644	-		PGA1_c35530	0.68	+2.2
3,724,709	-				-0.1
3,724,724	+				-2.9
3,724,802	+				-0.9
3,724,815	-				-1.0
3,724,834	-				+0.4
3,724,852	-				+0.2
3,724,925	+				+0.5
3,725,019	-		PGA1_c35540	0.13	-0.9
3,725,062	+		PGA1_c35540	0.15	-0.8
3,725,062	+		PGA1_c35540	0.15	-0.2
3,725,062	+		PGA1_c35540	0.15	+0.5
3,725,062	+		PGA1_c35540	0.15	-0.0
3,725,068	+		PGA1_c35540	0.16	+0.1
3,725,068	+		PGA1_c35540	0.16	+0.8
3,725,128	-		PGA1_c35540	0.19	-0.4
3,725,137	+		PGA1_c35540	0.20	+0.2
3,725,137	+		PGA1_c35540	0.20	-1.3
3,725,137	+		PGA1_c35540	0.20	-0.8
3,725,144	+		PGA1_c35540	0.20	+0.1
3,725,152	-		PGA1_c35540	0.21	-0.1
3,725,364	+		PGA1_c35540	0.34	-0.1
3,725,372	-		PGA1_c35540	0.35	+1.3
3,725,401	+		PGA1_c35540	0.36	-0.3
3,725,417	-		PGA1_c35540	0.37	-0.8
3,725,417	-		PGA1_c35540	0.37	-0.1
3,725,417	-		PGA1_c35540	0.37	-1.5
3,725,464	+		PGA1_c35540	0.40	-0.5
3,725,481	+		PGA1_c35540	0.41	-0.6
3,725,489	-		PGA1_c35540	0.42	-1.3