Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c34460

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
3,612,452	-		PGA1_c34440	0.81	+1.2
3,612,575	+				+0.0
3,612,611	+				+1.2
3,612,619	-				+0.3
3,612,631	+				-0.6
3,612,659	-				+0.8
3,612,695	+				-1.5
3,612,710	-		PGA1_c34450	0.12	-0.6
3,612,730	-		PGA1_c34450	0.14	-2.3
3,612,766	+		PGA1_c34450	0.19	-2.4
3,612,812	-		PGA1_c34450	0.24	-1.3
3,612,858	-		PGA1_c34450	0.30	-0.8
3,612,861	+		PGA1_c34450	0.30	-1.4
3,612,891	-		PGA1_c34450	0.34	-1.7
3,612,936	+		PGA1_c34450	0.39	-1.1
3,612,939	-		PGA1_c34450	0.40	+2.2
3,612,939	-		PGA1_c34450	0.40	-0.5
3,612,939	-		PGA1_c34450	0.40	-1.2
3,612,939	-		PGA1_c34450	0.40	-1.1
3,612,941	+		PGA1_c34450	0.40	-1.4
3,612,951	-		PGA1_c34450	0.41	-0.6
3,612,956	-		PGA1_c34450	0.42	-0.2
3,613,008	+		PGA1_c34450	0.48	-0.6
3,613,077	+		PGA1_c34450	0.57	-0.4
3,613,085	-		PGA1_c34450	0.58	-0.1
3,613,091	+		PGA1_c34450	0.58	-1.8
3,613,112	-		PGA1_c34450	0.61	-1.0
3,613,159	-		PGA1_c34450	0.67	+1.0
3,613,167	+		PGA1_c34450	0.68	-0.2
3,613,193	+		PGA1_c34450	0.71	+0.6
3,613,236	+		PGA1_c34450	0.76	+0.1
3,613,236	+		PGA1_c34450	0.76	-0.6
3,613,244	-		PGA1_c34450	0.77	-1.3
3,613,244	-		PGA1_c34450	0.77	-0.9
3,613,307	-		PGA1_c34450	0.85	-3.2
3,613,343	-		PGA1_c34450	0.89	-0.8
3,613,355	+				-0.3
3,613,363	-				-1.6
3,613,385	+				+0.4
3,613,423	+				-1.3
3,613,431	-				-0.9
3,613,473	+				-2.4
3,613,493	+				-1.2
3,613,493	+				+0.6
3,613,493	+				-2.0
3,613,505	+				-0.9
3,613,513	-				-0.8
3,613,513	-				+0.2
3,613,574	+		PGA1_c34460	0.14	-1.1
3,613,574	+		PGA1_c34460	0.14	-2.5
3,613,582	-		PGA1_c34460	0.15	+0.3
3,613,582	-		PGA1_c34460	0.15	+1.4
3,613,582	-		PGA1_c34460	0.15	-2.3
3,613,582	-		PGA1_c34460	0.15	-0.7
3,613,639	+		PGA1_c34460	0.20	-0.3
3,613,647	-		PGA1_c34460	0.21	-1.2
3,613,658	-		PGA1_c34460	0.22	+0.9
3,613,663	+		PGA1_c34460	0.22	-0.6
3,613,663	+		PGA1_c34460	0.22	-0.9
3,613,671	-		PGA1_c34460	0.23	+2.4
3,613,672	-		PGA1_c34460	0.23	-2.0
3,613,697	+		PGA1_c34460	0.25	+1.1
3,613,703	-		PGA1_c34460	0.26	-0.0
3,613,756	-		PGA1_c34460	0.31	-1.4
3,613,859	-		PGA1_c34460	0.41	-0.6
3,613,891	+		PGA1_c34460	0.44	-0.6
3,613,893	+		PGA1_c34460	0.44	-0.3
3,613,899	-		PGA1_c34460	0.44	-2.4
3,613,901	+		PGA1_c34460	0.44	+0.0
3,613,980	+		PGA1_c34460	0.52	-1.1
3,613,988	-		PGA1_c34460	0.53	-0.8
3,613,998	+		PGA1_c34460	0.54	-1.3
3,614,087	-		PGA1_c34460	0.62	-1.3
3,614,099	+		PGA1_c34460	0.63	-0.6
3,614,125	+		PGA1_c34460	0.65	-0.7
3,614,128	-		PGA1_c34460	0.66	-0.4
3,614,133	-		PGA1_c34460	0.66	-0.1
3,614,133	-		PGA1_c34460	0.66	-1.8
3,614,133	-		PGA1_c34460	0.66	-1.1
3,614,168	-		PGA1_c34460	0.69	-0.6
3,614,209	+		PGA1_c34460	0.73	-0.6
3,614,216	+		PGA1_c34460	0.74	-1.0
3,614,251	+		PGA1_c34460	0.77	-1.0
3,614,310	-		PGA1_c34460	0.83	+0.4
3,614,315	-		PGA1_c34460	0.83	-1.2
3,614,373	-		PGA1_c34460	0.89	-0.1
3,614,468	-				-0.0
3,614,501	-				+0.2
3,614,522	-				-0.7
3,614,533	-				-0.5
3,614,682	+		PGA1_c34470	0.19	-1.6
3,614,719	-		PGA1_c34470	0.23	-1.3
3,614,829	-		PGA1_c34470	0.34	+0.1
3,615,079	-		PGA1_c34470	0.59	-0.5
3,615,102	-		PGA1_c34470	0.62	-1.2
3,615,120	-		PGA1_c34470	0.64	-0.4
3,615,130	-		PGA1_c34470	0.65	-0.6
3,615,181	+		PGA1_c34470	0.70	-0.4
3,615,181	+		PGA1_c34470	0.70	-2.4
3,615,230	-		PGA1_c34470	0.75	-1.7
3,615,279	+		PGA1_c34470	0.80	-1.8
3,615,328	-		PGA1_c34470	0.85	+0.9
3,615,334	+		PGA1_c34470	0.85	-1.2
3,615,408	+				-2.2
3,615,448	-				-1.0
3,615,466	+				-0.7