Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c30070

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
3,142,341	-		PGA1_c30050	0.79	-0.9
3,142,391	+		PGA1_c30050	0.81	-0.9
3,142,391	+		PGA1_c30050	0.81	-1.4
3,142,391	+		PGA1_c30050	0.81	-1.1
3,142,399	-		PGA1_c30050	0.81	-0.7
3,142,399	-		PGA1_c30050	0.81	-0.2
3,142,399	-		PGA1_c30050	0.81	-0.1
3,142,466	+		PGA1_c30050	0.84	-0.1
3,142,466	-		PGA1_c30050	0.84	-3.0
3,142,474	-		PGA1_c30050	0.85	-1.6
3,142,476	+		PGA1_c30050	0.85	-4.2
3,142,484	-		PGA1_c30050	0.85	-1.0
3,142,542	+		PGA1_c30050	0.88	-3.1
3,142,567	-		PGA1_c30050	0.89	-2.6
3,142,582	-		PGA1_c30050	0.90	-0.9
3,142,585	+		PGA1_c30050	0.90	-1.1
3,142,593	-				+1.4
3,142,736	+				-0.8
3,142,788	-				+0.4
3,142,808	-				-1.3
3,142,894	+		PGA1_c30060	0.18	-0.1
3,143,064	+		PGA1_c30060	0.54	+1.4
3,143,074	+		PGA1_c30060	0.56	+0.9
3,143,074	+		PGA1_c30060	0.56	-0.4
3,143,082	-		PGA1_c30060	0.58	-0.8
3,143,082	-		PGA1_c30060	0.58	-0.8
3,143,082	-		PGA1_c30060	0.58	+0.5
3,143,082	-		PGA1_c30060	0.58	-0.5
3,143,136	+		PGA1_c30060	0.69	-1.5
3,143,144	-		PGA1_c30060	0.71	-1.0
3,143,152	-		PGA1_c30060	0.73	-0.2
3,143,168	-		PGA1_c30060	0.76	-0.6
3,143,196	-		PGA1_c30060	0.82	+0.5
3,143,361	+				+0.2
3,143,361	+				-0.6
3,143,361	+				-0.6
3,143,364	-				-0.1
3,143,367	-				-2.1
3,143,406	+				-0.4
3,143,414	-				-1.2
3,143,493	-		PGA1_c30070	0.14	+0.5
3,143,545	+		PGA1_c30070	0.17	+0.7
3,143,551	+		PGA1_c30070	0.17	-0.1
3,143,551	+		PGA1_c30070	0.17	+0.4
3,143,559	-		PGA1_c30070	0.18	-0.9
3,143,619	-		PGA1_c30070	0.21	+1.0
3,143,626	-		PGA1_c30070	0.22	+0.9
3,143,659	+		PGA1_c30070	0.24	-0.3
3,143,681	-		PGA1_c30070	0.25	-0.4
3,143,681	-		PGA1_c30070	0.25	-0.3
3,143,719	-		PGA1_c30070	0.28	-1.2
3,143,833	+		PGA1_c30070	0.35	-1.3
3,143,835	+		PGA1_c30070	0.35	-1.1
3,143,841	-		PGA1_c30070	0.35	-0.6
3,143,843	-		PGA1_c30070	0.35	-2.1
3,143,843	-		PGA1_c30070	0.35	-2.4
3,143,845	+		PGA1_c30070	0.36	-1.5
3,143,853	-		PGA1_c30070	0.36	-2.1
3,143,875	-		PGA1_c30070	0.37	+0.2
3,143,905	+		PGA1_c30070	0.39	+0.5
3,143,905	+		PGA1_c30070	0.39	-2.1
3,143,905	+		PGA1_c30070	0.39	-1.4
3,143,913	-		PGA1_c30070	0.40	-1.5
3,143,950	-		PGA1_c30070	0.42	-0.9
3,144,018	-		PGA1_c30070	0.46	-1.0
3,144,025	-		PGA1_c30070	0.47	+0.5
3,144,028	-		PGA1_c30070	0.47	-0.2
3,144,060	-		PGA1_c30070	0.49	-1.2
3,144,074	+		PGA1_c30070	0.50	-0.4
3,144,077	-		PGA1_c30070	0.50	-0.2
3,144,082	-		PGA1_c30070	0.50	-1.6
3,144,147	+		PGA1_c30070	0.54	-2.3
3,144,147	+		PGA1_c30070	0.54	-0.4
3,144,152	+		PGA1_c30070	0.55	-0.8
3,144,160	-		PGA1_c30070	0.55	+0.2
3,144,160	-		PGA1_c30070	0.55	+1.2
3,144,365	+		PGA1_c30070	0.68	-1.5
3,144,373	-		PGA1_c30070	0.69	-3.1
3,144,373	-		PGA1_c30070	0.69	+0.1
3,144,386	+		PGA1_c30070	0.69	-0.8
3,144,386	+		PGA1_c30070	0.69	-1.1
3,144,394	-		PGA1_c30070	0.70	-0.9
3,144,394	-		PGA1_c30070	0.70	-1.1
3,144,394	-		PGA1_c30070	0.70	-0.6
3,144,394	-		PGA1_c30070	0.70	-0.6
3,144,412	+		PGA1_c30070	0.71	+0.1
3,144,420	-		PGA1_c30070	0.72	-1.1
3,144,433	+		PGA1_c30070	0.72	-0.4
3,144,434	+		PGA1_c30070	0.72	-0.1
3,144,442	-		PGA1_c30070	0.73	-1.0
3,144,442	-		PGA1_c30070	0.73	-0.9
3,144,561	-		PGA1_c30070	0.80	-0.8
3,144,575	+		PGA1_c30070	0.81	-1.4
3,144,583	-		PGA1_c30070	0.82	-0.3
3,144,583	-		PGA1_c30070	0.82	+1.2
3,144,583	-		PGA1_c30070	0.82	-1.8
3,144,650	-		PGA1_c30070	0.86	-1.5
3,144,791	+				-1.9
3,144,948	+				-0.8
3,144,954	-				-0.6
3,145,016	+				-1.6
3,145,019	-				-0.8
3,145,024	-				-2.1
3,145,031	+				+0.1
3,145,041	+				-1.0
3,145,059	+				+0.2
3,145,066	+				-0.1
3,145,153	+				-0.3
3,145,165	+				-0.3
3,145,175	+				+0.6
3,145,230	+				-2.4
3,145,230	+				-0.1
3,145,232	-				+0.3
3,145,257	+				-0.6
3,145,257	+				-0.8
3,145,338	+				-2.4
3,145,351	-				+1.0
3,145,351	-				-0.6
3,145,421	-		PGA1_c30080	0.19	+1.2
3,145,421	-		PGA1_c30080	0.19	-0.8
3,145,457	+		PGA1_c30080	0.24	-1.1
3,145,465	-		PGA1_c30080	0.25	+0.5
3,145,505	+		PGA1_c30080	0.30	-2.6
3,145,505	+		PGA1_c30080	0.30	+0.6
3,145,513	-		PGA1_c30080	0.31	-0.1
3,145,615	+		PGA1_c30080	0.44	+0.3
3,145,615	+		PGA1_c30080	0.44	-0.1
3,145,633	+		PGA1_c30080	0.46	-1.0
3,145,634	+		PGA1_c30080	0.46	+0.4
3,145,642	-		PGA1_c30080	0.47	-0.4
3,145,651	-		PGA1_c30080	0.49	+0.2
3,145,651	-		PGA1_c30080	0.49	+0.2
3,145,651	-		PGA1_c30080	0.49	-0.2
3,145,714	+		PGA1_c30080	0.57	+0.3
3,145,714	+		PGA1_c30080	0.57	-0.7
3,145,733	+		PGA1_c30080	0.59	-2.1
3,145,733	+		PGA1_c30080	0.59	+0.0
3,145,762	-		PGA1_c30080	0.63	-1.2
3,145,815	-		PGA1_c30080	0.70	-0.9
3,145,838	+		PGA1_c30080	0.73	-0.4
3,145,838	+		PGA1_c30080	0.73	-0.2
3,145,838	+		PGA1_c30080	0.73	-2.1
3,145,846	-		PGA1_c30080	0.74	-1.1
3,145,846	-		PGA1_c30080	0.74	+0.1
3,145,866	+		PGA1_c30080	0.76	-0.8
3,145,866	+		PGA1_c30080	0.76	+0.2
3,145,874	-		PGA1_c30080	0.77	+0.5
3,145,874	-		PGA1_c30080	0.77	-0.1