Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c28800

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
3,018,527	-				+1.2
3,018,553	+				-0.7
3,018,574	-				+0.9
3,018,574	-				-1.4
3,018,610	+		PGA1_c28790	0.12	-1.1
3,018,610	+		PGA1_c28790	0.12	+1.3
3,018,726	+		PGA1_c28790	0.23	-0.3
3,018,726	+		PGA1_c28790	0.23	+0.5
3,018,802	-		PGA1_c28790	0.30	+0.5
3,018,817	-		PGA1_c28790	0.32	-1.4
3,018,828	+		PGA1_c28790	0.33	-0.9
3,018,870	-		PGA1_c28790	0.37	+0.5
3,019,035	+		PGA1_c28790	0.53	+2.1
3,019,070	+		PGA1_c28790	0.56	-1.1
3,019,079	-		PGA1_c28790	0.57	-1.4
3,019,089	-		PGA1_c28790	0.58	+1.4
3,019,128	-		PGA1_c28790	0.62	+2.2
3,019,182	+		PGA1_c28790	0.67	-1.1
3,019,221	+		PGA1_c28790	0.71	+0.2
3,019,221	+		PGA1_c28790	0.71	-0.7
3,019,271	-		PGA1_c28790	0.76	+1.1
3,019,272	+		PGA1_c28790	0.76	+0.4
3,019,280	-		PGA1_c28790	0.77	+0.9
3,019,280	-		PGA1_c28790	0.77	-0.9
3,019,318	-		PGA1_c28790	0.80	+0.4
3,019,319	-		PGA1_c28790	0.81	+0.6
3,019,322	+		PGA1_c28790	0.81	+1.5
3,019,327	+		PGA1_c28790	0.81	-0.3
3,019,330	-		PGA1_c28790	0.82	+1.6
3,019,355	+		PGA1_c28790	0.84	+1.2
3,019,366	-		PGA1_c28790	0.85	-1.1
3,019,371	-		PGA1_c28790	0.86	-1.0
3,019,371	-		PGA1_c28790	0.86	+2.5
3,019,439	+				+2.3
3,019,439	+				+2.5
3,019,439	+				-1.1
3,019,656	-		PGA1_c28800	0.46	+0.5
3,019,719	-		PGA1_c28800	0.65	-2.6
3,019,768	-		PGA1_c28800	0.81	-1.0
3,019,835	+				+2.5
3,019,838	-				+0.5
3,019,843	-				-1.9
3,019,900	+				+0.6
3,019,904	+				-1.1
3,019,904	+				-1.9
3,019,914	+				-0.6
3,019,915	+				+0.5
3,019,971	+				-0.7
3,019,971	+				+0.1
3,019,983	-				+1.6
3,020,094	-				+1.9
3,020,111	+				+1.0
3,020,126	+				-0.1
3,020,197	+				+1.3
3,020,259	+		PGA1_c28810	0.12	-1.1
3,020,259	+		PGA1_c28810	0.12	-2.0
3,020,259	+		PGA1_c28810	0.12	+2.1
3,020,259	+		PGA1_c28810	0.12	+2.9
3,020,267	-		PGA1_c28810	0.13	-0.4
3,020,267	-		PGA1_c28810	0.13	-1.1
3,020,267	-		PGA1_c28810	0.13	+0.9
3,020,341	-		PGA1_c28810	0.18	+0.4
3,020,386	-		PGA1_c28810	0.21	-0.1
3,020,396	-		PGA1_c28810	0.21	+1.2
3,020,464	+		PGA1_c28810	0.26	+1.0
3,020,472	-		PGA1_c28810	0.27	+1.9
3,020,481	+		PGA1_c28810	0.27	+0.3
3,020,566	+		PGA1_c28810	0.33	-0.9
3,020,753	+		PGA1_c28810	0.46	+0.5
3,020,753	+		PGA1_c28810	0.46	-0.9
3,020,753	+		PGA1_c28810	0.46	+0.2
3,020,753	+		PGA1_c28810	0.46	-1.7
3,020,753	+		PGA1_c28810	0.46	+0.5
3,020,753	+		PGA1_c28810	0.46	+0.9
3,020,753	+		PGA1_c28810	0.46	+1.5
3,020,753	+		PGA1_c28810	0.46	+1.6
3,020,753	+		PGA1_c28810	0.46	-0.1
3,020,753	+		PGA1_c28810	0.46	+0.5
3,020,761	-		PGA1_c28810	0.46	+0.2
3,020,761	-		PGA1_c28810	0.46	-0.1
3,020,761	-		PGA1_c28810	0.46	+0.9
3,020,761	-		PGA1_c28810	0.46	+0.5
3,020,761	-		PGA1_c28810	0.46	+1.0
3,020,761	-		PGA1_c28810	0.46	+1.6