Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c28250

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
2,951,545	+		PGA1_c28240	0.41	+0.3
2,951,578	+		PGA1_c28240	0.43	-0.2
2,951,578	+		PGA1_c28240	0.43	-0.4
2,951,578	+		PGA1_c28240	0.43	+0.8
2,951,578	+		PGA1_c28240	0.43	+1.5
2,951,666	+		PGA1_c28240	0.50	-1.4
2,951,674	-		PGA1_c28240	0.50	+0.1
2,951,708	-		PGA1_c28240	0.53	+0.3
2,951,714	-		PGA1_c28240	0.53	+0.2
2,951,745	-		PGA1_c28240	0.55	-0.7
2,951,745	-		PGA1_c28240	0.55	-0.3
2,951,909	+		PGA1_c28240	0.67	-0.1
2,951,917	-		PGA1_c28240	0.67	+0.3
2,951,922	+		PGA1_c28240	0.68	-1.0
2,951,973	-		PGA1_c28240	0.71	-1.2
2,951,980	+		PGA1_c28240	0.72	-0.4
2,951,993	-		PGA1_c28240	0.73	-0.8
2,952,002	+		PGA1_c28240	0.74	-0.8
2,952,016	+		PGA1_c28240	0.75	-1.4
2,952,039	-		PGA1_c28240	0.76	+0.8
2,952,165	-		PGA1_c28240	0.85	-0.8
2,952,282	+				-2.4
2,952,282	+				-0.6
2,952,362	+				-0.4
2,952,365	-				+0.8
2,952,370	-				-0.2
2,952,370	-				+0.2
2,952,395	-				-0.4
2,952,442	+				+0.8
2,952,450	-				-0.2
2,952,450	-				+1.8
2,952,463	-				-1.7
2,952,498	-				+2.8
2,952,555	-				+0.3
2,952,567	-				+0.1
2,952,602	-				-0.3
2,952,627	-				+0.8
2,952,679	+				+0.1
2,952,710	+		PGA1_c28250	0.11	+0.5
2,952,713	-		PGA1_c28250	0.11	+0.2
2,952,738	-		PGA1_c28250	0.12	+0.2
2,952,796	+		PGA1_c28250	0.16	+2.8
2,952,841	-		PGA1_c28250	0.18	+0.8
2,952,853	+		PGA1_c28250	0.19	-1.0
2,952,861	-		PGA1_c28250	0.19	+1.6
2,952,880	+		PGA1_c28250	0.20	-1.0
2,952,888	-		PGA1_c28250	0.21	+0.1
2,952,916	-		PGA1_c28250	0.22	-0.2
2,952,966	+		PGA1_c28250	0.25	+0.5
2,952,999	+		PGA1_c28250	0.27	-1.3
2,953,005	+		PGA1_c28250	0.27	-1.2
2,953,007	-		PGA1_c28250	0.27	+0.2
2,953,053	+		PGA1_c28250	0.30	+2.8
2,953,053	+		PGA1_c28250	0.30	+1.0
2,953,061	-		PGA1_c28250	0.30	+0.8
2,953,061	-		PGA1_c28250	0.30	-1.5
2,953,061	-		PGA1_c28250	0.30	+1.8
2,953,061	-		PGA1_c28250	0.30	-2.5
2,953,127	-		PGA1_c28250	0.34	+0.5
2,953,146	+		PGA1_c28250	0.35	+1.1
2,953,154	-		PGA1_c28250	0.35	+1.2
2,953,154	-		PGA1_c28250	0.35	-0.2
2,953,173	+		PGA1_c28250	0.36	-0.9
2,953,235	-		PGA1_c28250	0.40	+0.6
2,953,235	-		PGA1_c28250	0.40	+1.2
2,953,246	+		PGA1_c28250	0.41	-0.0
2,953,375	-		PGA1_c28250	0.48	+1.2
2,953,391	+		PGA1_c28250	0.49	-0.8
2,953,408	+		PGA1_c28250	0.50	-1.2
2,953,565	+		PGA1_c28250	0.58	+2.4
2,953,595	-		PGA1_c28250	0.60	+0.8
2,953,607	-		PGA1_c28250	0.61	-2.0
2,953,753	+		PGA1_c28250	0.69	-1.6
2,953,778	+		PGA1_c28250	0.70	+1.0
2,953,786	-		PGA1_c28250	0.70	+0.2
2,953,809	-		PGA1_c28250	0.72	+0.6
2,953,832	+		PGA1_c28250	0.73	+0.8
2,953,867	+		PGA1_c28250	0.75	-2.2
2,953,896	-		PGA1_c28250	0.77	-1.2
2,953,962	-		PGA1_c28250	0.80	+0.9
2,953,962	-		PGA1_c28250	0.80	-0.8
2,953,962	-		PGA1_c28250	0.80	+0.6
2,953,987	+		PGA1_c28250	0.82	+2.6
2,953,987	+		PGA1_c28250	0.82	+3.6
2,953,995	-		PGA1_c28250	0.82	-1.2
2,953,995	-		PGA1_c28250	0.82	+0.1
2,953,995	-		PGA1_c28250	0.82	+0.4
2,954,071	+		PGA1_c28250	0.86	+0.3
2,954,071	+		PGA1_c28250	0.86	-1.5
2,954,099	-		PGA1_c28250	0.88	-1.8
2,954,120	+		PGA1_c28250	0.89	-0.8
2,954,127	+		PGA1_c28250	0.89	+1.6
2,954,131	+		PGA1_c28250	0.90	+0.4
2,954,186	-				+0.1
2,954,239	+				-0.8
2,954,273	+				-0.2
2,954,286	+				+0.6
2,954,286	+				-0.5
2,954,327	+				+0.8
2,954,332	+				+0.5
2,954,340	-				+1.8
2,954,340	-				-1.2
2,954,340	-				-0.0
2,954,370	+				-0.2
2,954,370	+				+0.2
2,954,378	-				+0.6
2,954,580	-				+1.4
2,954,651	+				+1.8
2,954,831	-		PGA1_c28260	0.28	-2.2
2,954,893	-		PGA1_c28260	0.34	-0.0
2,954,915	+		PGA1_c28260	0.36	+0.5
2,954,919	+		PGA1_c28260	0.37	+0.8
2,954,941	+		PGA1_c28260	0.39	+0.2
2,955,028	-		PGA1_c28260	0.48	+0.8
2,955,160	+		PGA1_c28260	0.61	-0.8
2,955,160	+		PGA1_c28260	0.61	+0.2
2,955,175	-		PGA1_c28260	0.63	+0.4
2,955,200	-		PGA1_c28260	0.65	+0.2
2,955,200	-		PGA1_c28260	0.65	+3.4
2,955,246	-		PGA1_c28260	0.70	-0.5
2,955,246	-		PGA1_c28260	0.70	+0.6