Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c27630

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
2,878,129	+		PGA1_c27620	0.34	+0.2
2,878,150	+		PGA1_c27620	0.36	-1.0
2,878,195	+		PGA1_c27620	0.39	+0.2
2,878,221	-		PGA1_c27620	0.41	-0.7
2,878,405	+		PGA1_c27620	0.55	-0.0
2,878,456	+		PGA1_c27620	0.59	-1.8
2,878,485	-		PGA1_c27620	0.61	-2.8
2,878,529	+		PGA1_c27620	0.64	-0.1
2,878,537	-		PGA1_c27620	0.65	-1.2
2,878,542	+		PGA1_c27620	0.65	-0.0
2,878,550	-		PGA1_c27620	0.66	-0.8
2,878,550	-		PGA1_c27620	0.66	+0.1
2,878,591	+		PGA1_c27620	0.69	-0.2
2,878,602	+		PGA1_c27620	0.70	+0.3
2,878,604	-		PGA1_c27620	0.70	+0.7
2,878,604	-		PGA1_c27620	0.70	+0.4
2,878,678	+		PGA1_c27620	0.76	-0.4
2,878,685	+		PGA1_c27620	0.76	-3.5
2,878,686	-		PGA1_c27620	0.76	-1.5
2,878,698	-		PGA1_c27620	0.77	+0.3
2,878,723	-		PGA1_c27620	0.79	-0.2
2,878,726	-		PGA1_c27620	0.79	-0.8
2,878,773	+		PGA1_c27620	0.83	-1.2
2,878,995	-				+0.4
2,879,007	-				+0.7
2,879,013	+				-0.3
2,879,023	+				-0.0
2,879,031	-				+0.4
2,879,100	-				-0.3
2,879,116	+				-0.2
2,879,124	-				-0.8
2,879,124	-				+0.6
2,879,124	-				-3.3
2,879,124	-				+0.8
2,879,126	+				-1.1
2,879,160	-		PGA1_c27630	0.11	-0.9
2,879,173	+		PGA1_c27630	0.12	-3.0
2,879,173	+		PGA1_c27630	0.12	-0.6
2,879,173	+		PGA1_c27630	0.12	-2.3
2,879,173	+		PGA1_c27630	0.12	-0.6
2,879,181	-		PGA1_c27630	0.13	-1.6
2,879,243	+		PGA1_c27630	0.18	-1.1
2,879,322	+		PGA1_c27630	0.24	+0.4
2,879,322	+		PGA1_c27630	0.24	-0.3
2,879,322	+		PGA1_c27630	0.24	+0.6
2,879,330	-		PGA1_c27630	0.25	-0.2
2,879,419	+		PGA1_c27630	0.32	-1.0
2,879,483	-		PGA1_c27630	0.37	-0.9
2,879,523	-		PGA1_c27630	0.40	-1.8
2,879,564	+		PGA1_c27630	0.44	-1.8
2,879,569	+		PGA1_c27630	0.44	-1.2
2,879,618	+		PGA1_c27630	0.48	-0.8
2,879,626	-		PGA1_c27630	0.49	-1.2
2,879,631	+		PGA1_c27630	0.49	-0.5
2,879,644	-		PGA1_c27630	0.50	-0.5
2,879,644	-		PGA1_c27630	0.50	-1.7
2,879,644	-		PGA1_c27630	0.50	-1.1
2,879,689	+		PGA1_c27630	0.54	-2.2
2,879,689	+		PGA1_c27630	0.54	+0.8
2,879,689	+		PGA1_c27630	0.54	-2.8
2,879,689	+		PGA1_c27630	0.54	-1.8
2,879,689	+		PGA1_c27630	0.54	-1.0
2,879,697	-		PGA1_c27630	0.54	-1.0
2,879,697	-		PGA1_c27630	0.54	-1.6
2,879,697	-		PGA1_c27630	0.54	-1.5
2,879,746	+		PGA1_c27630	0.58	+0.4
2,879,766	+		PGA1_c27630	0.60	+0.0
2,879,774	-		PGA1_c27630	0.61	-1.7
2,879,776	+		PGA1_c27630	0.61	+1.3
2,879,791	-		PGA1_c27630	0.62	-0.2
2,879,865	+		PGA1_c27630	0.68	-0.5
2,879,871	-		PGA1_c27630	0.68	+0.3
2,879,912	+		PGA1_c27630	0.72	-3.1
2,879,913	-		PGA1_c27630	0.72	-0.6
2,879,920	-		PGA1_c27630	0.72	+0.3
2,879,965	-		PGA1_c27630	0.76	-0.3
2,879,972	+		PGA1_c27630	0.76	-0.2
2,880,023	-		PGA1_c27630	0.81	-1.7
2,880,057	-		PGA1_c27630	0.83	-1.6
2,880,062	+		PGA1_c27630	0.84	-0.6
2,880,153	-				-0.9
2,880,219	-				-0.3
2,880,261	+				+0.2
2,880,261	+				-0.8
2,880,261	+				+1.7
2,880,265	+				+0.9
2,880,265	+				-2.3
2,880,268	+				-2.5
2,880,269	-				+0.8
2,880,269	-				-0.7
2,880,330	+				+0.0
2,880,343	+				-0.8
2,880,343	+				+0.3
2,880,351	-				+0.5
2,880,362	-				-0.8
2,880,372	+				-1.2
2,880,373	-				-0.0
2,880,376	+				+0.2
2,880,384	-				+0.2
2,880,384	-				-2.6
2,880,389	+				-0.2
2,880,439	+		PGA1_c27640	0.13	-1.6
2,880,485	+		PGA1_c27640	0.21	-0.4
2,880,505	+		PGA1_c27640	0.24	-0.6
2,880,573	+		PGA1_c27640	0.36	-1.4
2,880,573	+		PGA1_c27640	0.36	-0.8
2,880,573	+		PGA1_c27640	0.36	-0.5
2,880,573	+		PGA1_c27640	0.36	-0.6
2,880,581	-		PGA1_c27640	0.37	-2.0
2,880,581	-		PGA1_c27640	0.37	-1.4
2,880,581	-		PGA1_c27640	0.37	-0.8
2,880,581	-		PGA1_c27640	0.37	-2.0
2,880,581	-		PGA1_c27640	0.37	-0.4
2,880,581	-		PGA1_c27640	0.37	+1.1
2,880,581	-		PGA1_c27640	0.37	-0.6
2,880,581	-		PGA1_c27640	0.37	+0.8
2,880,581	-		PGA1_c27640	0.37	+0.1
2,880,581	-		PGA1_c27640	0.37	-0.8
2,880,581	-		PGA1_c27640	0.37	-1.7
2,880,581	-		PGA1_c27640	0.37	-0.6
2,880,585	-		PGA1_c27640	0.38	-0.2
2,880,590	-		PGA1_c27640	0.39	-0.2
2,880,692	+		PGA1_c27640	0.56	-0.2
2,880,699	+		PGA1_c27640	0.57	-2.2
2,880,707	-		PGA1_c27640	0.58	-0.8
2,880,709	+		PGA1_c27640	0.59	+0.8
2,880,709	+		PGA1_c27640	0.59	-0.4
2,880,709	+		PGA1_c27640	0.59	-0.2
2,880,717	-		PGA1_c27640	0.60	+1.8
2,880,722	-		PGA1_c27640	0.61	+0.2
2,880,759	+		PGA1_c27640	0.67	-0.7
2,880,759	+		PGA1_c27640	0.67	-0.5
2,880,761	+		PGA1_c27640	0.67	-0.2
2,880,767	-		PGA1_c27640	0.68	+1.7
2,880,767	-		PGA1_c27640	0.68	-0.8
2,880,836	+		PGA1_c27640	0.80	+0.5
2,880,860	+		PGA1_c27640	0.84	+0.2
2,880,879	+		PGA1_c27640	0.87	-1.1
2,880,889	+		PGA1_c27640	0.89	-0.8
2,880,957	-				-2.0
2,880,974	+				-0.4
2,880,982	-				-1.4
2,880,982	-				-0.6
2,881,022	-				-1.2
2,881,032	-				-1.1
2,881,032	-				-0.8
2,881,039	-				-1.4
2,881,049	-				-0.5
2,881,203	+				-1.2
2,881,204	+				-1.2
2,881,204	+				+1.5
2,881,224	+				-1.8
2,881,224	+				-0.7
2,881,224	+				-1.1
2,881,225	-				+0.9