Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c25150

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
2,617,177	-				+0.9
2,617,235	-		PGA1_c25140	0.11	-0.6
2,617,300	-		PGA1_c25140	0.19	-0.1
2,617,319	+		PGA1_c25140	0.22	-0.3
2,617,321	+		PGA1_c25140	0.22	-0.9
2,617,329	-		PGA1_c25140	0.23	-1.4
2,617,380	+		PGA1_c25140	0.30	+1.7
2,617,380	+		PGA1_c25140	0.30	-1.1
2,617,380	+		PGA1_c25140	0.30	-2.4
2,617,388	-		PGA1_c25140	0.31	-1.9
2,617,388	-		PGA1_c25140	0.31	-2.1
2,617,388	-		PGA1_c25140	0.31	-0.4
2,617,388	-		PGA1_c25140	0.31	-0.5
2,617,388	-		PGA1_c25140	0.31	-2.3
2,617,455	-		PGA1_c25140	0.39	-0.9
2,617,465	-		PGA1_c25140	0.41	+2.1
2,617,534	+		PGA1_c25140	0.50	-0.9
2,617,540	+		PGA1_c25140	0.50	-0.1
2,617,542	+		PGA1_c25140	0.51	-1.3
2,617,564	+		PGA1_c25140	0.53	+0.2
2,617,564	-		PGA1_c25140	0.53	-1.1
2,617,569	+		PGA1_c25140	0.54	-1.9
2,617,569	+		PGA1_c25140	0.54	+0.7
2,617,598	-		PGA1_c25140	0.58	+0.6
2,617,600	+		PGA1_c25140	0.58	+0.4
2,617,600	+		PGA1_c25140	0.58	-1.2
2,617,608	+		PGA1_c25140	0.59	-0.5
2,617,626	+		PGA1_c25140	0.61	-0.7
2,617,635	-		PGA1_c25140	0.63	-1.2
2,617,713	+		PGA1_c25140	0.73	+0.4
2,617,713	+		PGA1_c25140	0.73	-0.3
2,617,713	+		PGA1_c25140	0.73	-0.5
2,617,726	+		PGA1_c25140	0.74	-1.0
2,617,750	+		PGA1_c25140	0.78	-0.5
2,617,769	-		PGA1_c25140	0.80	-0.4
2,617,769	-		PGA1_c25140	0.80	-0.1
2,617,817	-		PGA1_c25140	0.86	+0.2
2,617,817	-		PGA1_c25140	0.86	-2.2
2,617,817	-		PGA1_c25140	0.86	+0.7
2,617,822	-		PGA1_c25140	0.87	-0.8
2,617,849	-				+0.4
2,617,866	-				-1.4
2,617,877	+				+0.7
2,617,912	+				+0.5
2,618,033	+				-0.3
2,618,036	-				-0.7
2,618,041	-				-2.5
2,618,041	-				-1.8
2,618,043	+				-1.4
2,618,043	+				-0.4
2,618,051	-				-0.2
2,618,051	-				-1.5
2,618,051	-				-1.7
2,618,051	-				-1.1
2,618,051	-				-0.8
2,618,104	-				+0.9
2,618,125	+				-1.2
2,618,133	-				-0.5
2,618,133	-				-2.0
2,618,196	-				-1.1
2,618,253	+				-1.0
2,618,346	-		PGA1_c25150	0.10	-0.9
2,618,401	+		PGA1_c25150	0.13	-1.9
2,618,410	+		PGA1_c25150	0.13	-1.5
2,618,434	-		PGA1_c25150	0.14	-2.9
2,618,447	-		PGA1_c25150	0.15	-1.0
2,618,480	-		PGA1_c25150	0.16	-0.7
2,618,588	+		PGA1_c25150	0.21	-2.0
2,618,589	-		PGA1_c25150	0.21	-1.2
2,618,596	-		PGA1_c25150	0.21	-0.8
2,618,606	+		PGA1_c25150	0.22	-2.1
2,618,606	+		PGA1_c25150	0.22	-3.2
2,618,728	+		PGA1_c25150	0.27	-0.5
2,618,739	-		PGA1_c25150	0.27	+0.4
2,619,001	-		PGA1_c25150	0.39	-0.9
2,619,088	-		PGA1_c25150	0.42	-2.0
2,619,100	-		PGA1_c25150	0.43	-1.4
2,619,111	-		PGA1_c25150	0.43	-3.0
2,619,271	+		PGA1_c25150	0.50	-1.4
2,619,284	-		PGA1_c25150	0.51	-0.8
2,619,298	+		PGA1_c25150	0.51	+2.5
2,619,360	-		PGA1_c25150	0.54	-1.5
2,619,362	+		PGA1_c25150	0.54	-0.7
2,619,394	+		PGA1_c25150	0.55	+1.5
2,619,527	-		PGA1_c25150	0.61	+0.9
2,619,545	+		PGA1_c25150	0.62	-2.5
2,619,553	-		PGA1_c25150	0.62	+0.3
2,619,618	+		PGA1_c25150	0.65	-2.0
2,619,744	+		PGA1_c25150	0.71	-1.9
2,619,752	-		PGA1_c25150	0.71	-0.5
2,619,765	+		PGA1_c25150	0.71	-1.2
2,619,790	+		PGA1_c25150	0.73	+0.4
2,619,913	+		PGA1_c25150	0.78	-2.1
2,619,921	-		PGA1_c25150	0.78	-1.7
2,619,938	+		PGA1_c25150	0.79	-2.4
2,619,938	+		PGA1_c25150	0.79	-1.4
2,619,946	-		PGA1_c25150	0.79	-1.6
2,619,971	+		PGA1_c25150	0.80	-0.7
2,619,971	+		PGA1_c25150	0.80	-0.1
2,619,971	+		PGA1_c25150	0.80	-1.0
2,620,001	-		PGA1_c25150	0.82	-1.1
2,620,053	-		PGA1_c25150	0.84	-0.5
2,620,053	-		PGA1_c25150	0.84	-1.8
2,620,082	-		PGA1_c25150	0.85	-0.1
2,620,222	-				-2.1
2,620,222	-				-0.3
2,620,223	-				-0.0
2,620,242	+				-1.5
2,620,310	+				-1.2
2,620,339	-				-1.1
2,620,422	+				-0.2
2,620,422	+				-1.5
2,620,430	-				-0.5
2,620,430	-				+0.9
2,620,430	-				-2.0
2,620,646	-		PGA1_c25160	0.22	-0.7
2,620,806	-		PGA1_c25160	0.39	+0.2
2,620,821	-		PGA1_c25160	0.40	-0.9
2,620,821	-		PGA1_c25160	0.40	+0.9
2,620,838	+		PGA1_c25160	0.42	-0.0
2,620,866	+		PGA1_c25160	0.45	-0.3
2,620,925	-		PGA1_c25160	0.51	+0.0
2,620,966	-		PGA1_c25160	0.55	-0.2
2,620,992	-		PGA1_c25160	0.58	+0.0
2,621,043	+		PGA1_c25160	0.63	-1.3
2,621,124	-		PGA1_c25160	0.72	-0.8
2,621,149	+		PGA1_c25160	0.74	+0.1
2,621,154	+		PGA1_c25160	0.75	+0.3
2,621,155	-		PGA1_c25160	0.75	-0.7
2,621,168	-		PGA1_c25160	0.76	+0.8
2,621,169	-		PGA1_c25160	0.76	-0.7
2,621,176	-		PGA1_c25160	0.77	-0.7
2,621,181	-		PGA1_c25160	0.78	+0.3
2,621,191	-		PGA1_c25160	0.79	-0.4
2,621,191	-		PGA1_c25160	0.79	-2.5
2,621,221	-		PGA1_c25160	0.82	-1.3
2,621,266	+		PGA1_c25160	0.86	-0.6
2,621,292	+		PGA1_c25160	0.89	-0.7
2,621,300	+		PGA1_c25160	0.90	-0.1
2,621,316	-				-2.7
2,621,387	-				+1.9