Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c24590

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
2,564,621	-		PGA1_c24580	0.41	+0.5
2,564,628	+		PGA1_c24580	0.41	-0.6
2,564,628	+		PGA1_c24580	0.41	+0.1
2,564,690	-		PGA1_c24580	0.46	-0.0
2,564,729	+		PGA1_c24580	0.49	+0.2
2,564,729	+		PGA1_c24580	0.49	-0.4
2,564,786	+		PGA1_c24580	0.53	+0.1
2,564,799	-		PGA1_c24580	0.54	-0.1
2,564,804	-		PGA1_c24580	0.55	+0.2
2,564,841	-		PGA1_c24580	0.57	-0.6
2,564,849	+		PGA1_c24580	0.58	-1.0
2,564,906	+		PGA1_c24580	0.62	+1.6
2,564,906	+		PGA1_c24580	0.62	-0.0
2,564,906	+		PGA1_c24580	0.62	+1.1
2,564,914	-		PGA1_c24580	0.63	-0.6
2,564,914	-		PGA1_c24580	0.63	-1.6
2,564,914	-		PGA1_c24580	0.63	-1.3
2,564,924	-		PGA1_c24580	0.64	+0.7
2,565,001	+		PGA1_c24580	0.70	-0.8
2,565,114	+		PGA1_c24580	0.78	+0.3
2,565,114	+		PGA1_c24580	0.78	-0.5
2,565,122	-		PGA1_c24580	0.79	+1.2
2,565,144	-		PGA1_c24580	0.81	-0.5
2,565,252	+		PGA1_c24580	0.89	+0.7
2,565,280	-				+1.0
2,565,402	+				-1.5
2,565,435	-				-0.6
2,565,458	+				-1.2
2,565,474	+				-0.6
2,565,521	-				-1.0
2,565,521	-				-0.4
2,565,521	-				-0.2
2,565,540	+				-2.7
2,565,540	+				-2.5
2,565,540	+				-1.0
2,565,540	+				-0.3
2,565,548	-				-1.6
2,565,569	-				-0.2
2,565,701	-		PGA1_c24590	0.25	-0.5
2,565,737	-		PGA1_c24590	0.30	-1.3
2,565,789	+		PGA1_c24590	0.37	-1.8
2,565,815	-		PGA1_c24590	0.40	-1.0
2,565,825	+		PGA1_c24590	0.42	-1.4
2,565,978	+		PGA1_c24590	0.63	-3.6
2,565,979	+		PGA1_c24590	0.63	-1.2
2,566,076	-		PGA1_c24590	0.77	-1.9
2,566,112	+		PGA1_c24590	0.82	-2.8
2,566,112	+		PGA1_c24590	0.82	+0.8
2,566,112	+		PGA1_c24590	0.82	-0.5
2,566,112	+		PGA1_c24590	0.82	+1.3
2,566,114	+		PGA1_c24590	0.82	+0.3
2,566,114	+		PGA1_c24590	0.82	-0.7
2,566,120	-		PGA1_c24590	0.83	-0.8
2,566,138	+		PGA1_c24590	0.86	-2.6
2,566,138	+		PGA1_c24590	0.86	-0.6
2,566,138	+		PGA1_c24590	0.86	-0.9
2,566,138	+		PGA1_c24590	0.86	-0.6
2,566,146	-		PGA1_c24590	0.87	-2.7
2,566,146	-		PGA1_c24590	0.87	-0.0
2,566,146	-		PGA1_c24590	0.87	-2.6
2,566,148	+		PGA1_c24590	0.87	-1.1
2,566,148	+		PGA1_c24590	0.87	-1.2
2,566,148	+		PGA1_c24590	0.87	-0.4
2,566,148	+		PGA1_c24590	0.87	-0.6
2,566,148	+		PGA1_c24590	0.87	-2.6
2,566,148	+		PGA1_c24590	0.87	-0.9
2,566,148	+		PGA1_c24590	0.87	+0.4
2,566,148	+		PGA1_c24590	0.87	-1.6
2,566,148	+		PGA1_c24590	0.87	-1.2
2,566,148	+		PGA1_c24590	0.87	-1.8
2,566,148	+		PGA1_c24590	0.87	-2.2
2,566,148	+		PGA1_c24590	0.87	+1.0
2,566,148	+		PGA1_c24590	0.87	-2.1
2,566,148	+		PGA1_c24590	0.87	-0.1
2,566,148	+		PGA1_c24590	0.87	-2.7
2,566,148	+		PGA1_c24590	0.87	-1.6
2,566,148	+		PGA1_c24590	0.87	-0.7
2,566,148	+		PGA1_c24590	0.87	+1.1
2,566,148	+		PGA1_c24590	0.87	-3.1
2,566,148	+		PGA1_c24590	0.87	-0.9
2,566,148	+		PGA1_c24590	0.87	-0.5
2,566,148	+		PGA1_c24590	0.87	+0.4
2,566,148	+		PGA1_c24590	0.87	-2.5
2,566,148	+		PGA1_c24590	0.87	-2.4
2,566,148	+		PGA1_c24590	0.87	+0.4
2,566,148	+		PGA1_c24590	0.87	-1.3
2,566,148	+		PGA1_c24590	0.87	-0.7
2,566,153	+		PGA1_c24590	0.88	-1.3
2,566,153	+		PGA1_c24590	0.88	-1.0
2,566,155	+		PGA1_c24590	0.88	-1.3
2,566,155	+		PGA1_c24590	0.88	+1.3
2,566,156	-		PGA1_c24590	0.88	-0.3
2,566,156	-		PGA1_c24590	0.88	-0.1
2,566,156	-		PGA1_c24590	0.88	+1.3
2,566,156	-		PGA1_c24590	0.88	-1.4
2,566,156	-		PGA1_c24590	0.88	-2.0
2,566,156	-		PGA1_c24590	0.88	-2.6
2,566,156	-		PGA1_c24590	0.88	-0.8
2,566,156	-		PGA1_c24590	0.88	-2.0
2,566,156	-		PGA1_c24590	0.88	-0.7
2,566,156	-		PGA1_c24590	0.88	-0.5
2,566,156	-		PGA1_c24590	0.88	-1.5
2,566,156	-		PGA1_c24590	0.88	-0.7
2,566,156	-		PGA1_c24590	0.88	-1.9
2,566,156	-		PGA1_c24590	0.88	-0.1
2,566,161	-		PGA1_c24590	0.89	-1.8
2,566,165	-		PGA1_c24590	0.89	-0.6
2,566,168	+				-2.2
2,566,182	+				+1.2
2,566,182	+				+0.3
2,566,182	+				-2.6
2,566,182	+				-0.7
2,566,182	+				-0.6
2,566,182	+				-0.8
2,566,182	+				-0.2
2,566,183	+				+0.2
2,566,183	+				+1.0
2,566,188	+				-1.5
2,566,190	-				-1.6
2,566,190	-				-0.3
2,566,190	-				-0.9
2,566,190	-				+0.2
2,566,191	-				+0.2
2,566,221	+				-2.7
2,566,229	-				-0.3
2,566,298	+				+1.0
2,566,298	+				+0.7
2,566,305	+				+0.4
2,566,306	-				+1.5
2,566,306	-				-0.6
2,566,306	-				-0.0
2,566,308	+				-0.9
2,566,308	+				-0.3
2,566,316	-				-0.0
2,566,342	-				-0.4
2,566,355	+				-0.5
2,566,396	+				+0.1
2,566,404	-				-0.9
2,566,404	-				-0.4
2,566,551	-				-2.0
2,566,551	-				-0.4
2,566,621	-				-0.6
2,566,639	+				-0.0
2,566,647	-				-0.5
2,566,652	-				-0.5
2,566,665	-				-0.8
2,566,679	+				+0.1
2,566,709	+				+0.4
2,566,709	+				-0.6
2,566,709	+				-1.5
2,566,710	+				+0.4
2,566,710	+				+0.2
2,566,717	-				-1.8
2,566,717	-				-0.0
2,566,717	-				-1.8
2,566,717	-				+0.3
2,566,736	+				-1.8
2,566,833	+				-0.4
2,566,878	-				+0.8
2,567,068	+				+0.5
2,567,076	-				+0.3
2,567,080	+				-0.2
2,567,088	-				-1.2
2,567,148	-		PGA1_c24610	0.10	+0.4
2,567,148	-		PGA1_c24610	0.10	+1.4
2,567,162	+		PGA1_c24610	0.11	-0.2
2,567,177	-		PGA1_c24610	0.11	+0.2
2,567,185	+		PGA1_c24610	0.12	-0.7
2,567,193	-		PGA1_c24610	0.12	-1.2
2,567,193	-		PGA1_c24610	0.12	-0.6
2,567,197	+		PGA1_c24610	0.12	-1.0
2,567,201	+		PGA1_c24610	0.12	-1.4