Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2316

Experiment: butyrate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	butyrate (C)
2,465,698	+		Psest_2314	0.82	-1.3
2,465,698	+		Psest_2314	0.82	-0.2
2,465,698	+		Psest_2314	0.82	-0.1
2,465,698	+		Psest_2314	0.82	-0.4
2,465,703	-		Psest_2314	0.83	-0.1
2,465,703	-		Psest_2314	0.83	+0.8
2,465,822	+				+0.8
2,465,874	+				+0.6
2,465,875	-				+0.2
2,465,875	-				-0.8
2,465,875	-				-0.2
2,465,875	-				-1.3
2,466,011	+		Psest_2315	0.11	-1.1
2,466,011	+		Psest_2315	0.11	+0.3
2,466,012	-		Psest_2315	0.11	-1.6
2,466,012	-		Psest_2315	0.11	-0.7
2,466,012	-		Psest_2315	0.11	+0.1
2,466,012	-		Psest_2315	0.11	-0.8
2,466,017	+		Psest_2315	0.12	+1.2
2,466,018	-		Psest_2315	0.13	+0.6
2,466,018	-		Psest_2315	0.13	+0.0
2,466,167	+		Psest_2315	0.43	+0.7
2,466,167	+		Psest_2315	0.43	+1.9
2,466,167	+		Psest_2315	0.43	+1.5
2,466,167	+		Psest_2315	0.43	+1.0
2,466,167	+		Psest_2315	0.43	+0.9
2,466,168	-		Psest_2315	0.43	-1.2
2,466,168	-		Psest_2315	0.43	+0.9
2,466,168	-		Psest_2315	0.43	+0.1
2,466,410	+				+0.5
2,466,437	+				+1.0
2,466,437	+				+0.5
2,466,437	+				+2.1
2,466,437	+				-0.6
2,466,437	+				+1.0
2,466,437	+				-0.1
2,466,437	+				+0.6
2,466,437	+				-1.7
2,466,437	+				-0.9
2,466,437	+				+0.2
2,466,437	+				-0.9
2,466,438	-				+0.2
2,466,438	-				+0.4
2,466,438	-				+1.4
2,466,438	-				+0.8
2,466,486	+				+1.2
2,466,486	+				-1.4
2,466,494	+				+0.6
2,466,496	+				-0.3
2,466,496	+				-0.2
2,466,496	+				+0.6
2,466,496	+				-0.2
2,466,496	+				-0.2
2,466,497	-				+2.3
2,466,497	-				+0.7
2,466,497	-				+1.4
2,466,497	-				+0.5
2,466,497	-				+0.4
2,466,506	+				-0.4
2,466,506	+				+0.2
2,466,506	+				+1.0
2,466,506	+				+2.0
2,466,525	+				+1.1
2,466,525	+				+0.1
2,466,525	+				+0.8
2,466,612	+				+0.9
2,466,742	+				+0.6
2,466,743	-				+1.6
2,466,743	-				+1.1
2,466,750	+				+0.6
2,466,750	+				+0.2
2,466,750	+				+0.6
2,466,750	+				+1.7
2,466,751	-				-2.1
2,466,751	-				+2.8
2,466,972	-		Psest_2316	0.15	+2.1
2,466,972	-		Psest_2316	0.15	+0.7
2,467,203	+		Psest_2316	0.25	+0.3
2,467,204	-		Psest_2316	0.25	+1.5
2,467,204	-		Psest_2316	0.25	-0.3
2,467,297	+		Psest_2316	0.29	+0.6
2,467,301	+		Psest_2316	0.29	+1.8
2,467,301	+		Psest_2316	0.29	-0.9
2,467,301	+		Psest_2316	0.29	+1.3
2,467,301	+		Psest_2316	0.29	+0.9
2,467,302	-		Psest_2316	0.29	+0.8
2,467,302	-		Psest_2316	0.29	+1.5
2,467,302	-		Psest_2316	0.29	+0.9
2,467,302	-		Psest_2316	0.29	+1.1
2,467,302	-		Psest_2316	0.29	+0.6
2,467,302	-		Psest_2316	0.29	+0.8
2,467,302	-		Psest_2316	0.29	-0.3
2,467,302	-		Psest_2316	0.29	+0.9
2,467,348	-		Psest_2316	0.31	+1.1
2,468,002	+		Psest_2316	0.59	+0.9
2,468,003	-		Psest_2316	0.59	+0.8
2,468,004	+		Psest_2316	0.59	+0.8
2,468,004	+		Psest_2316	0.59	-1.4
2,468,004	+		Psest_2316	0.59	+1.8
2,468,004	+		Psest_2316	0.59	+1.0
2,468,004	+		Psest_2316	0.59	+0.4
2,468,004	+		Psest_2316	0.59	+1.2
2,468,004	+		Psest_2316	0.59	+1.8
2,468,004	+		Psest_2316	0.59	-1.2
2,468,004	+		Psest_2316	0.59	+0.9
2,468,004	+		Psest_2316	0.59	+0.5
2,468,004	+		Psest_2316	0.59	+1.8
2,468,004	+		Psest_2316	0.59	+0.7
2,468,004	+		Psest_2316	0.59	+0.5
2,468,004	+		Psest_2316	0.59	+0.5
2,468,004	+		Psest_2316	0.59	+1.1
2,468,004	+		Psest_2316	0.59	+1.7
2,468,004	+		Psest_2316	0.59	+0.7
2,468,004	+		Psest_2316	0.59	+1.5
2,468,004	+		Psest_2316	0.59	+0.1
2,468,005	-		Psest_2316	0.59	+1.1
2,468,005	-		Psest_2316	0.59	+0.9
2,468,005	-		Psest_2316	0.59	+1.6
2,468,005	-		Psest_2316	0.59	-0.1
2,468,005	-		Psest_2316	0.59	-0.9
2,468,005	-		Psest_2316	0.59	+1.3
2,468,005	-		Psest_2316	0.59	+0.5
2,468,005	-		Psest_2316	0.59	+0.8
2,468,005	-		Psest_2316	0.59	+0.8
2,468,005	-		Psest_2316	0.59	+1.8
2,468,005	-		Psest_2316	0.59	+0.1
2,468,005	-		Psest_2316	0.59	+1.1
2,468,005	-		Psest_2316	0.59	+2.5
2,468,005	-		Psest_2316	0.59	+0.5
2,468,005	-		Psest_2316	0.59	+0.8
2,468,005	-		Psest_2316	0.59	+0.1
2,468,005	-		Psest_2316	0.59	-0.7
2,468,005	-		Psest_2316	0.59	+1.0
2,468,005	-		Psest_2316	0.59	+1.2
2,468,005	-		Psest_2316	0.59	+0.4
2,468,005	-		Psest_2316	0.59	+1.2
2,468,005	-		Psest_2316	0.59	+0.5
2,468,005	-		Psest_2316	0.59	-1.2
2,468,058	+		Psest_2316	0.61	+1.6
2,468,059	-		Psest_2316	0.61	+0.0
2,468,059	-		Psest_2316	0.61	+0.4
2,468,190	+		Psest_2316	0.67	+2.7
2,468,190	+		Psest_2316	0.67	+1.1
2,468,191	-		Psest_2316	0.67	+0.6
2,468,271	+		Psest_2316	0.70	+0.6
2,468,272	-		Psest_2316	0.70	+0.5
2,468,966	+				+0.0
2,468,966	+				+0.5
2,468,967	-				-0.1
2,468,967	-				+1.2
2,468,967	-				+0.6
2,468,967	-				-0.1
2,468,967	-				+0.5
2,468,967	-				+0.9
2,468,967	-				+1.5
2,468,971	-				+0.4
2,468,971	-				+0.6
2,468,971	-				+0.1
2,468,971	-				-0.1
2,468,971	-				+1.2
2,468,971	-				+1.4
2,468,971	-				+1.0
2,468,975	+				-0.9
2,468,975	+				+0.9
2,468,975	+				-1.5
2,468,976	-				+1.1
2,468,997	+				+0.9
2,468,998	-				+1.2
2,468,998	-				-0.8
2,468,998	-				+0.4
2,468,998	-				-0.6
2,468,998	-				+1.5
2,468,998	-				-1.3
2,468,998	-				+0.6
2,468,998	-				-0.1
2,469,055	-				-2.2
2,469,055	-				+0.1
2,469,055	-				-0.2
2,469,058	+				-0.1
2,469,093	+				+0.7
2,469,093	+				+1.2
2,469,097	-				-1.3
2,469,097	-				-2.6
2,469,099	-				-0.4
2,469,099	-				-1.2
2,469,223	+		Psest_2317	0.11	+0.1
2,469,224	-		Psest_2317	0.11	-1.1
2,469,224	-		Psest_2317	0.11	-1.6
2,469,224	-		Psest_2317	0.11	+0.1
2,469,249	+		Psest_2317	0.14	+0.6
2,469,249	+		Psest_2317	0.14	+0.4
2,469,253	+		Psest_2317	0.14	+0.2
2,469,253	+		Psest_2317	0.14	+1.1
2,469,253	+		Psest_2317	0.14	+2.1
2,469,253	+		Psest_2317	0.14	-0.8
2,469,253	+		Psest_2317	0.14	-0.3
2,469,253	+		Psest_2317	0.14	+0.2
2,469,254	-		Psest_2317	0.15	-1.8
2,469,254	-		Psest_2317	0.15	+0.5
2,469,296	+		Psest_2317	0.20	+1.0
2,469,453	+		Psest_2317	0.39	-0.5
2,469,464	+		Psest_2317	0.40	+0.4
2,469,464	+		Psest_2317	0.40	-0.1
2,469,495	+		Psest_2317	0.44	+0.9
2,469,495	+		Psest_2317	0.44	+1.8
2,469,495	+		Psest_2317	0.44	-0.4
2,469,495	+		Psest_2317	0.44	+0.5
2,469,495	+		Psest_2317	0.44	+0.4
2,469,495	+		Psest_2317	0.44	+1.1
2,469,495	+		Psest_2317	0.44	+1.2
2,469,496	-		Psest_2317	0.44	-3.6
2,469,496	-		Psest_2317	0.44	-0.7
2,469,496	-		Psest_2317	0.44	-1.2
2,469,561	+		Psest_2317	0.52	-0.9
2,469,561	+		Psest_2317	0.52	+1.0
2,469,614	+		Psest_2317	0.58	-0.7
2,469,615	-		Psest_2317	0.59	-0.9
2,469,615	-		Psest_2317	0.59	+0.5
2,469,624	+		Psest_2317	0.60	+0.4
2,469,624	+		Psest_2317	0.60	-0.7
2,469,624	+		Psest_2317	0.60	+1.7
2,469,625	-		Psest_2317	0.60	-1.2
2,469,660	+		Psest_2317	0.64	+0.2
2,469,661	-		Psest_2317	0.64	-0.7
2,469,717	+		Psest_2317	0.71	+0.1
2,469,717	+		Psest_2317	0.71	+0.9
2,469,717	+		Psest_2317	0.71	+1.0
2,469,717	+		Psest_2317	0.71	+0.5
2,469,718	-		Psest_2317	0.71	-0.4
2,469,871	-		Psest_2317	0.90	-2.3
2,469,952	-				+0.1
2,469,966	+				+1.3