Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c22970

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
2,380,119	+				-1.2
2,380,127	-				+1.0
2,380,131	-				-2.2
2,380,154	+				-0.9
2,380,154	+				-0.1
2,380,154	+				-0.9
2,380,154	+				+0.1
2,380,154	+				+2.6
2,380,154	+				-0.3
2,380,154	+				+1.0
2,380,161	+				-0.3
2,380,161	+				-1.2
2,380,161	+				-1.2
2,380,161	+				+0.5
2,380,161	+				+0.8
2,380,162	-				+0.4
2,380,162	-				-1.3
2,380,162	-				+1.0
2,380,162	-				+1.3
2,380,162	-				-1.1
2,380,162	-				+1.0
2,380,169	-				+0.4
2,380,169	-				+1.1
2,380,169	-				-0.1
2,380,169	-				+1.0
2,380,169	-				+1.0
2,380,169	-				+0.4
2,380,175	+				+0.7
2,380,175	+				-0.6
2,380,175	+				+4.0
2,380,175	+				-2.3
2,380,175	+				+0.8
2,380,181	+				-0.6
2,380,181	+				-1.1
2,380,181	+				-1.3
2,380,181	+				-0.0
2,380,183	-				-0.0
2,380,183	-				-0.6
2,380,183	-				+1.0
2,380,185	+				-1.5
2,380,189	-				+0.8
2,380,189	-				-1.3
2,380,189	-				+0.8
2,380,191	+				+0.8
2,380,214	-				+2.0
2,380,244	+				+0.8
2,380,251	+				+0.6
2,380,251	+				+0.7
2,380,251	+				+0.7
2,380,251	+				+1.0
2,380,252	+				+0.8
2,380,259	-				-0.6
2,380,259	-				-0.6
2,380,259	-				-0.2
2,380,259	-				-0.9
2,380,259	-				+0.3
2,380,259	-				+0.6
2,380,259	-				+2.1
2,380,268	+				-1.2
2,380,274	-				+1.0
2,380,278	+				+0.1
2,380,332	+				+0.4
2,380,332	+				+0.7
2,380,340	-				-1.6
2,380,340	-				-0.6
2,380,355	+				-0.2
2,380,355	+				-0.4
2,380,355	+				+0.7
2,380,360	+				+0.4
2,380,368	-				-1.3
2,380,414	-				+1.2
2,380,444	+				-0.4
2,380,446	+				+1.2
2,380,446	+				-0.6
2,380,463	+				-2.6
2,380,463	+				-0.6
2,380,463	+				-1.1
2,380,463	+				-2.3
2,380,479	+				+0.7
2,380,479	+				-0.1
2,380,479	+				+0.3
2,380,479	+				+0.5
2,380,479	+				+0.5
2,380,487	-				+0.4
2,380,497	-				+0.3
2,380,499	+				-0.0
2,380,507	-				-1.8
2,380,525	-				-0.8
2,380,538	+				+1.0
2,380,540	+				-0.3
2,380,545	+				-1.8
2,380,546	-				-0.9
2,380,563	+				-0.8
2,380,563	+				-0.6
2,380,571	-				-2.5
2,380,571	-				+0.8
2,380,576	-				+0.2
2,380,578	-				+1.1
2,380,584	+				+1.3
2,380,586	-				+0.4
2,380,592	-				+0.7
2,380,594	-				-2.3
2,380,599	+				-1.1
2,380,606	-				-0.7
2,380,630	-				-0.2
2,380,642	-				+3.0
2,380,656	+				-0.4
2,380,656	+				+0.7
2,380,681	+				-1.2
2,380,688	-				-3.3
2,380,689	-				+0.2
2,380,689	-				+1.2
2,380,701	+				-0.4
2,380,737	-				-0.1
2,380,737	-				-1.3
2,380,746	+				+1.1
2,380,746	+				-0.9
2,380,747	-				+0.4
2,380,747	-				+2.2
2,380,747	-				-0.1
2,380,747	-				-0.6
2,380,754	-				-0.2
2,380,769	+				+0.7
2,380,774	+				-1.2
2,380,782	-				-0.6
2,380,782	-				+2.8
2,380,822	+				+1.6
2,380,878	+				-3.0
2,380,886	-				+0.0
2,380,897	+				+0.4
2,380,898	-				+0.0
2,380,903	-				+1.0
2,380,911	+				-0.3
2,380,911	+				+1.0
2,380,911	+				+0.5
2,380,911	+				-0.3
2,380,911	+				+0.6
2,380,911	+				+0.2
2,380,911	+				+0.3
2,380,911	+				+0.2
2,380,911	+				-1.0
2,380,911	+				+0.6
2,380,916	+				-0.7
2,380,919	-				-1.2
2,380,919	-				-2.3
2,380,919	-				-0.2
2,380,919	-				+1.5
2,380,919	-				+0.0
2,380,919	-				-0.5
2,380,955	+				-0.6
2,380,960	+				+0.5
2,380,963	-				+0.2
2,380,963	-				-0.9
2,380,963	-				-1.3
2,380,968	-				+0.2
2,380,968	-				-0.8
2,380,998	+				-0.6
2,381,003	+				-0.1
2,381,003	+				+0.0
2,381,003	+				+0.0
2,381,003	+				-0.7
2,381,005	+				+0.0
2,381,006	-				+0.0
2,381,006	-				-0.3
2,381,088	+				-2.3
2,381,088	+				-0.9
2,381,113	+				+0.2
2,381,120	+				+1.3
2,381,120	+				+0.3
2,381,120	+				-0.4
2,381,137	+				+0.1
2,381,145	+				+0.8
2,381,145	-				+1.2
2,381,145	-				-1.0
2,381,161	-				-0.3
2,381,174	-				-3.0
2,381,197	-				-0.6
2,381,212	+				+0.1
2,381,212	+				+0.2
2,381,220	-				+0.4
2,381,222	+				-2.7
2,381,322	+		PGA1_c22970	0.11	+0.4
2,381,322	+		PGA1_c22970	0.11	-0.2
2,381,322	+		PGA1_c22970	0.11	-1.0
2,381,330	-		PGA1_c22970	0.11	-0.7
2,381,330	-		PGA1_c22970	0.11	-1.0
2,381,335	-		PGA1_c22970	0.12	+2.0
2,381,343	-		PGA1_c22970	0.12	-0.1
2,381,361	+		PGA1_c22970	0.13	+0.5
2,381,451	+		PGA1_c22970	0.18	-0.2
2,381,491	-		PGA1_c22970	0.20	-1.0
2,381,506	+		PGA1_c22970	0.21	-2.9
2,381,539	+		PGA1_c22970	0.22	+0.1
2,381,542	-		PGA1_c22970	0.22	-2.0
2,381,547	-		PGA1_c22970	0.23	-1.3
2,381,547	-		PGA1_c22970	0.23	-0.3
2,381,573	-		PGA1_c22970	0.24	-0.4
2,381,578	-		PGA1_c22970	0.24	+0.2
2,381,599	-		PGA1_c22970	0.25	-0.1
2,381,650	+		PGA1_c22970	0.28	+1.2
2,381,690	-		PGA1_c22970	0.30	+0.6
2,381,690	-		PGA1_c22970	0.30	-1.6
2,381,690	-		PGA1_c22970	0.30	+0.0
2,381,695	-		PGA1_c22970	0.31	+0.8
2,381,695	-		PGA1_c22970	0.31	-2.0
2,381,719	+		PGA1_c22970	0.32	+1.5
2,381,741	+		PGA1_c22970	0.33	+1.3
2,381,741	+		PGA1_c22970	0.33	-1.3
2,381,741	+		PGA1_c22970	0.33	-1.1
2,381,803	-		PGA1_c22970	0.36	+0.7
2,381,831	-		PGA1_c22970	0.38	+0.6
2,381,841	-		PGA1_c22970	0.38	-0.2
2,381,859	+		PGA1_c22970	0.39	+0.1
2,381,882	+		PGA1_c22970	0.40	+1.2
2,381,883	-		PGA1_c22970	0.40	-1.1
2,381,890	-		PGA1_c22970	0.41	+1.2
2,381,902	+		PGA1_c22970	0.41	-1.2
2,382,039	+		PGA1_c22970	0.49	-0.5
2,382,040	+		PGA1_c22970	0.49	+0.2
2,382,048	-		PGA1_c22970	0.49	-1.5
2,382,058	+		PGA1_c22970	0.50	+1.0
2,382,060	-		PGA1_c22970	0.50	-0.5
2,382,077	-		PGA1_c22970	0.51	-1.8
2,382,095	-		PGA1_c22970	0.52	+1.0
2,382,107	+		PGA1_c22970	0.52	-0.3
2,382,115	-		PGA1_c22970	0.53	+1.1
2,382,144	+		PGA1_c22970	0.54	+3.3
2,382,154	+		PGA1_c22970	0.55	-1.1
2,382,154	+		PGA1_c22970	0.55	-0.9
2,382,154	+		PGA1_c22970	0.55	+0.1
2,382,162	-		PGA1_c22970	0.55	+0.3
2,382,258	-		PGA1_c22970	0.60	-0.8
2,382,258	-		PGA1_c22970	0.60	-0.4
2,382,304	-		PGA1_c22970	0.63	-0.6
2,382,308	+		PGA1_c22970	0.63	-0.9
2,382,316	-		PGA1_c22970	0.63	-0.3
2,382,316	-		PGA1_c22970	0.63	-0.4
2,382,316	-		PGA1_c22970	0.63	-0.4
2,382,356	-		PGA1_c22970	0.65	+0.3
2,382,400	-		PGA1_c22970	0.68	+0.2
2,382,407	-		PGA1_c22970	0.68	-0.5
2,382,471	+		PGA1_c22970	0.72	+1.0
2,382,479	-		PGA1_c22970	0.72	+0.4
2,382,479	-		PGA1_c22970	0.72	+0.0
2,382,479	-		PGA1_c22970	0.72	+0.2
2,382,479	-		PGA1_c22970	0.72	-0.7
2,382,528	-		PGA1_c22970	0.75	-2.2
2,382,530	+		PGA1_c22970	0.75	-1.1
2,382,530	+		PGA1_c22970	0.75	-0.2
2,382,530	+		PGA1_c22970	0.75	+0.6
2,382,533	-		PGA1_c22970	0.75	-2.3
2,382,538	-		PGA1_c22970	0.75	-0.6
2,382,538	-		PGA1_c22970	0.75	+0.1
2,382,548	-		PGA1_c22970	0.76	-0.2
2,382,592	-		PGA1_c22970	0.78	+0.6
2,382,615	+		PGA1_c22970	0.79	-0.5
2,382,633	+		PGA1_c22970	0.80	+1.3
2,382,642	+		PGA1_c22970	0.81	-2.5
2,382,650	-		PGA1_c22970	0.81	-0.5
2,382,675	-		PGA1_c22970	0.82	+0.8
2,382,720	-		PGA1_c22970	0.85	-1.6
2,382,744	+		PGA1_c22970	0.86	-0.3
2,382,764	+		PGA1_c22970	0.87	+1.7
2,382,764	+		PGA1_c22970	0.87	+0.5
2,382,769	+		PGA1_c22970	0.87	+0.2
2,382,772	-		PGA1_c22970	0.87	+0.4
2,382,777	-		PGA1_c22970	0.88	-0.2
2,382,782	-		PGA1_c22970	0.88	+0.6
2,382,811	-		PGA1_c22970	0.89	+0.8
2,382,842	-				+0.9
2,382,858	+				-0.3
2,382,859	+				-1.5
2,382,859	+				-1.7
2,382,859	+				-0.6
2,382,867	-				-1.1
2,382,867	-				+1.2
2,382,867	-				-0.3
2,382,911	-				-0.2
2,382,943	-				+1.0
2,382,943	-				-0.2
2,382,947	+				+1.0
2,382,948	-				+0.9
2,382,959	+				+0.2
2,382,987	+				-1.6
2,383,082	+				-0.6
2,383,116	-				+1.1
2,383,128	+				-1.2
2,383,148	-				+1.0
2,383,155	+				+0.0
2,383,164	-				+1.2
2,383,222	-		PGA1_c22980	0.12	-0.5
2,383,271	-		PGA1_c22980	0.15	+0.7
2,383,292	+		PGA1_c22980	0.16	-1.2
2,383,436	-		PGA1_c22980	0.24	+0.5
2,383,451	-		PGA1_c22980	0.25	+0.2
2,383,473	-		PGA1_c22980	0.26	+0.6
2,383,473	-		PGA1_c22980	0.26	+0.7
2,383,493	+		PGA1_c22980	0.27	+1.6
2,383,493	+		PGA1_c22980	0.27	+0.2
2,383,501	-		PGA1_c22980	0.28	+0.2
2,383,501	-		PGA1_c22980	0.28	+0.1
2,383,600	-		PGA1_c22980	0.33	-0.7
2,383,614	+		PGA1_c22980	0.34	-0.4
2,383,648	+		PGA1_c22980	0.36	+1.7
2,383,672	+		PGA1_c22980	0.37	-0.6
2,383,674	-		PGA1_c22980	0.37	-0.8
2,383,730	+		PGA1_c22980	0.40	+0.7
2,383,732	+		PGA1_c22980	0.40	+0.6
2,383,738	-		PGA1_c22980	0.41	+0.3
2,383,738	-		PGA1_c22980	0.41	-1.1
2,383,738	-		PGA1_c22980	0.41	-0.8
2,383,753	+		PGA1_c22980	0.42	-0.8
2,383,873	+		PGA1_c22980	0.48	+0.3
2,383,873	+		PGA1_c22980	0.48	-0.4
2,383,911	+		PGA1_c22980	0.50	+1.4
2,383,912	+		PGA1_c22980	0.50	+1.4
2,383,919	-		PGA1_c22980	0.51	+0.1
2,383,919	-		PGA1_c22980	0.51	-0.7
2,383,938	-		PGA1_c22980	0.52	+0.9
2,383,939	+		PGA1_c22980	0.52	-0.5
2,383,947	-		PGA1_c22980	0.52	+0.0
2,383,947	-		PGA1_c22980	0.52	+1.7
2,383,947	-		PGA1_c22980	0.52	-0.2
2,383,971	+		PGA1_c22980	0.54	+0.3
2,383,971	+		PGA1_c22980	0.54	-0.7
2,383,971	+		PGA1_c22980	0.54	-0.2
2,383,979	-		PGA1_c22980	0.54	+0.3
2,383,979	-		PGA1_c22980	0.54	-0.6
2,383,979	-		PGA1_c22980	0.54	+0.5
2,383,979	-		PGA1_c22980	0.54	-0.7
2,383,979	-		PGA1_c22980	0.54	+1.0
2,383,979	-		PGA1_c22980	0.54	-1.2
2,383,979	-		PGA1_c22980	0.54	+0.0
2,383,979	-		PGA1_c22980	0.54	+0.7