Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c22280

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
2,312,540	-				-1.6
2,312,540	-				+0.7
2,312,540	-				-1.3
2,312,566	-				-3.3
2,312,629	+				+0.7
2,312,632	-				-0.9
2,312,637	-				+0.4
2,312,773	-				+0.1
2,312,778	-				-0.0
2,312,839	-		PGA1_c22260	0.19	+1.0
2,312,865	-		PGA1_c22260	0.25	-0.9
2,312,886	+		PGA1_c22260	0.31	-0.3
2,312,930	-		PGA1_c22260	0.43	-0.2
2,312,949	-		PGA1_c22260	0.48	-1.2
2,312,956	+		PGA1_c22260	0.49	+0.3
2,312,974	-		PGA1_c22260	0.54	-0.6
2,312,974	-		PGA1_c22260	0.54	-0.9
2,312,984	+		PGA1_c22260	0.57	-2.2
2,313,094	-		PGA1_c22260	0.86	-0.5
2,313,154	+				+0.2
2,313,223	+		PGA1_c22270	0.19	+0.8
2,313,258	+		PGA1_c22270	0.30	-1.6
2,313,258	+		PGA1_c22270	0.30	-0.4
2,313,261	-		PGA1_c22270	0.30	-1.8
2,313,263	+		PGA1_c22270	0.31	-1.0
2,313,291	+		PGA1_c22270	0.39	-1.3
2,313,291	+		PGA1_c22270	0.39	-0.0
2,313,418	+		PGA1_c22270	0.76	-2.2
2,313,418	+		PGA1_c22270	0.76	-0.1
2,313,421	-		PGA1_c22270	0.77	-0.5
2,313,450	+		PGA1_c22270	0.85	-0.0
2,313,464	-		PGA1_c22270	0.89	-0.5
2,313,486	+				+0.5
2,313,518	+				+0.3
2,313,604	-		PGA1_c22280	0.26	-0.7
2,313,635	-		PGA1_c22280	0.32	-1.3
2,313,635	-		PGA1_c22280	0.32	-0.5
2,313,698	+		PGA1_c22280	0.46	-0.8
2,313,720	+		PGA1_c22280	0.50	+0.1
2,313,732	-		PGA1_c22280	0.53	-1.0
2,313,762	-		PGA1_c22280	0.59	+0.8
2,313,764	+		PGA1_c22280	0.60	-0.9
2,313,767	-		PGA1_c22280	0.60	+0.0
2,313,767	-		PGA1_c22280	0.60	-0.8
2,313,772	-		PGA1_c22280	0.61	-0.6
2,313,844	+		PGA1_c22280	0.77	-1.0
2,313,870	-		PGA1_c22280	0.82	-1.4
2,313,929	-				-1.0
2,313,933	-				-1.3
2,313,954	+				+0.2
2,313,954	+				-0.6
2,313,962	-				+0.6
2,313,962	-				+0.1
2,313,962	-				-1.4
2,313,982	+				-1.6
2,314,019	+				-1.4
2,314,099	-		PGA1_c22290	0.20	-0.3
2,314,167	+		PGA1_c22290	0.29	+0.5
2,314,194	-		PGA1_c22290	0.33	-2.6
2,314,195	+		PGA1_c22290	0.33	-0.0
2,314,225	+		PGA1_c22290	0.37	+0.2
2,314,233	-		PGA1_c22290	0.38	-0.7
2,314,239	-		PGA1_c22290	0.39	-0.5
2,314,254	-		PGA1_c22290	0.41	-0.6
2,314,260	+		PGA1_c22290	0.42	+1.6
2,314,268	-		PGA1_c22290	0.43	+0.3
2,314,268	-		PGA1_c22290	0.43	-2.9
2,314,268	-		PGA1_c22290	0.43	+0.7
2,314,268	-		PGA1_c22290	0.43	+0.8
2,314,273	+		PGA1_c22290	0.44	-1.9
2,314,294	-		PGA1_c22290	0.47	-0.5
2,314,309	+		PGA1_c22290	0.49	-0.3
2,314,316	-		PGA1_c22290	0.50	-1.3
2,314,317	-		PGA1_c22290	0.50	-0.8
2,314,331	+		PGA1_c22290	0.52	-1.2
2,314,376	+		PGA1_c22290	0.58	+1.8
2,314,377	+		PGA1_c22290	0.58	+0.2
2,314,385	+		PGA1_c22290	0.59	-0.1
2,314,393	-		PGA1_c22290	0.60	-1.2
2,314,397	+		PGA1_c22290	0.61	+0.3
2,314,397	+		PGA1_c22290	0.61	-0.2
2,314,405	-		PGA1_c22290	0.62	+0.5
2,314,415	-		PGA1_c22290	0.63	-0.6
2,314,417	-		PGA1_c22290	0.63	-1.0
2,314,434	+		PGA1_c22290	0.66	+0.8
2,314,442	-		PGA1_c22290	0.67	+1.0
2,314,459	+		PGA1_c22290	0.69	-2.7
2,314,469	+		PGA1_c22290	0.71	-2.3
2,314,482	-		PGA1_c22290	0.72	-0.8
2,314,501	+		PGA1_c22290	0.75	-0.8
2,314,501	+		PGA1_c22290	0.75	+1.1
2,314,509	-		PGA1_c22290	0.76	-1.6
2,314,509	-		PGA1_c22290	0.76	+0.1
2,314,546	-		PGA1_c22290	0.81	+1.1
2,314,609	+				-0.0
2,314,632	+				+0.7
2,314,635	-				-0.0
2,314,695	+				-1.2
2,314,701	+				-0.0
2,314,731	-		PGA1_c22300	0.15	+2.1
2,314,767	+		PGA1_c22300	0.26	+0.7
2,314,767	+		PGA1_c22300	0.26	-0.4
2,314,795	-		PGA1_c22300	0.34	+0.1
2,314,810	-		PGA1_c22300	0.38	+1.0