Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2232

Experiment: butyrate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	butyrate (C)
2,380,801	+		Psest_2230	0.66	-1.8
2,380,801	+		Psest_2230	0.66	+0.7
2,380,879	-		Psest_2230	0.72	-1.4
2,380,971	+		Psest_2230	0.78	-1.2
2,380,972	-		Psest_2230	0.79	-0.3
2,380,972	-		Psest_2230	0.79	-0.3
2,381,021	-		Psest_2230	0.82	+1.1
2,381,021	-		Psest_2230	0.82	-2.2
2,381,021	-		Psest_2230	0.82	-1.0
2,381,088	+		Psest_2230	0.87	-0.9
2,381,101	-		Psest_2230	0.88	+0.5
2,381,243	+				-1.6
2,381,244	-				-2.1
2,381,256	+				-1.6
2,381,265	+				-0.1
2,381,265	+				-0.5
2,381,265	+				-0.7
2,381,265	+				-0.3
2,381,265	+				-0.7
2,381,265	+				-0.6
2,381,265	+				-1.3
2,381,265	+				-0.1
2,381,265	+				-2.3
2,381,265	+				+0.1
2,381,266	-				-1.2
2,381,266	-				-2.0
2,381,266	-				+2.1
2,381,266	-				-0.3
2,381,266	-				-1.7
2,381,266	-				-0.8
2,381,266	-				-0.3
2,381,266	-				-1.4
2,381,266	-				-1.4
2,381,266	-				-0.8
2,381,266	-				+0.5
2,381,266	-				-0.6
2,381,266	-				+0.1
2,381,266	-				-0.3
2,381,266	-				+2.1
2,381,266	-				+0.3
2,381,266	-				-0.3
2,381,266	-				-1.5
2,381,266	-				+0.3
2,381,266	-				-1.4
2,381,266	-				+2.1
2,381,266	-				-0.8
2,381,266	-				-0.2
2,381,266	-				-0.5
2,381,266	-				+0.5
2,381,397	+		Psest_2231	0.15	+1.4
2,381,397	+		Psest_2231	0.15	-1.1
2,381,397	+		Psest_2231	0.15	+1.0
2,381,397	+		Psest_2231	0.15	-0.0
2,381,397	+		Psest_2231	0.15	+0.5
2,381,397	+		Psest_2231	0.15	+0.3
2,381,397	+		Psest_2231	0.15	+0.2
2,381,398	-		Psest_2231	0.15	+0.4
2,381,398	-		Psest_2231	0.15	+0.5
2,381,398	-		Psest_2231	0.15	-0.6
2,381,398	-		Psest_2231	0.15	+1.3
2,381,398	-		Psest_2231	0.15	+1.1
2,381,545	-		Psest_2231	0.50	+0.7
2,381,627	-		Psest_2231	0.69	-0.9
2,381,662	-		Psest_2231	0.78	+0.5
2,381,664	+		Psest_2231	0.78	+0.1
2,381,664	+		Psest_2231	0.78	+0.4
2,381,664	+		Psest_2231	0.78	+1.3
2,381,665	-		Psest_2231	0.78	+0.9
2,381,665	-		Psest_2231	0.78	+0.2
2,381,665	-		Psest_2231	0.78	-0.4
2,381,665	-		Psest_2231	0.78	+1.1
2,381,694	+		Psest_2231	0.85	+1.0
2,381,694	+		Psest_2231	0.85	+0.1
2,381,694	+		Psest_2231	0.85	+0.7
2,381,694	+		Psest_2231	0.85	+2.5
2,381,694	+		Psest_2231	0.85	+1.1
2,381,694	+		Psest_2231	0.85	+0.5
2,381,694	+		Psest_2231	0.85	-0.4
2,381,694	+		Psest_2231	0.85	+0.4
2,381,694	+		Psest_2231	0.85	+0.9
2,381,694	+		Psest_2231	0.85	+1.1
2,381,694	+		Psest_2231	0.85	+1.1
2,381,695	-		Psest_2231	0.85	+1.2
2,381,695	-		Psest_2231	0.85	+0.1
2,381,695	-		Psest_2231	0.85	-1.0
2,381,695	-		Psest_2231	0.85	+0.7
2,381,695	-		Psest_2231	0.85	-0.1
2,381,695	-		Psest_2231	0.85	-1.7
2,381,813	+				-1.1
2,381,813	+				+0.3
2,381,814	-				-0.1
2,381,825	+				-1.6
2,381,849	+				-1.6
2,381,849	+				-0.9
2,381,849	+				-1.8
2,381,850	-				-1.7
2,381,850	-				-1.8
2,381,850	-				-1.6
2,381,850	-				-1.9
2,381,850	-				-2.3
2,381,894	+		Psest_2232	0.12	-3.4
2,381,894	+		Psest_2232	0.12	-1.4
2,381,894	+		Psest_2232	0.12	-2.0
2,381,894	+		Psest_2232	0.12	-0.5
2,381,894	+		Psest_2232	0.12	-1.3
2,381,895	-		Psest_2232	0.12	-1.6
2,381,895	-		Psest_2232	0.12	-1.8
2,381,903	-		Psest_2232	0.13	-2.3
2,382,011	+		Psest_2232	0.26	-0.9
2,382,011	+		Psest_2232	0.26	-1.9
2,382,012	-		Psest_2232	0.26	-2.3
2,382,083	+		Psest_2232	0.35	-1.7
2,382,083	+		Psest_2232	0.35	-0.1
2,382,083	+		Psest_2232	0.35	-2.3
2,382,084	-		Psest_2232	0.35	-2.3
2,382,084	-		Psest_2232	0.35	-3.2
2,382,084	-		Psest_2232	0.35	-2.7
2,382,122	+		Psest_2232	0.39	-1.9
2,382,122	+		Psest_2232	0.39	+0.4
2,382,122	+		Psest_2232	0.39	-2.0
2,382,122	+		Psest_2232	0.39	-2.7
2,382,122	+		Psest_2232	0.39	-1.5
2,382,122	+		Psest_2232	0.39	-1.4
2,382,123	-		Psest_2232	0.40	-1.1
2,382,145	+		Psest_2232	0.42	-2.5
2,382,145	+		Psest_2232	0.42	-0.9
2,382,145	+		Psest_2232	0.42	-1.7
2,382,185	+		Psest_2232	0.47	-1.4
2,382,185	+		Psest_2232	0.47	-1.3
2,382,185	+		Psest_2232	0.47	-1.7
2,382,185	+		Psest_2232	0.47	-0.8
2,382,185	+		Psest_2232	0.47	-2.0
2,382,185	+		Psest_2232	0.47	-2.3
2,382,185	+		Psest_2232	0.47	-0.8
2,382,186	-		Psest_2232	0.47	-1.1
2,382,186	-		Psest_2232	0.47	-0.7
2,382,186	-		Psest_2232	0.47	-2.0
2,382,186	-		Psest_2232	0.47	-2.5
2,382,186	-		Psest_2232	0.47	-1.1
2,382,380	+		Psest_2232	0.70	-1.4
2,382,380	+		Psest_2232	0.70	-2.6
2,382,380	+		Psest_2232	0.70	-1.0
2,382,380	+		Psest_2232	0.70	-1.7
2,382,381	-		Psest_2232	0.70	-3.1
2,382,381	-		Psest_2232	0.70	-2.7
2,382,381	-		Psest_2232	0.70	-1.9
2,382,381	-		Psest_2232	0.70	-0.3
2,382,381	-		Psest_2232	0.70	-2.0
2,382,381	-		Psest_2232	0.70	-1.3
2,382,422	+		Psest_2232	0.75	-0.9
2,382,423	-		Psest_2232	0.75	-2.7
2,382,723	+				+1.7
2,382,723	+				+1.9
2,382,723	+				+0.9
2,382,724	-				+0.8
2,382,768	-				-0.1
2,382,780	+				-1.1
2,382,804	+				+0.5
2,382,804	+				+0.9
2,382,838	+				+0.2
2,382,839	-				-0.5
2,382,892	+				+0.3
2,383,001	+				-0.1
2,383,001	+				+1.7
2,383,002	-				+0.6
2,383,038	-				-0.7
2,383,039	+				-1.3
2,383,039	+				+0.3
2,383,039	+				-0.0
2,383,039	+				+0.2
2,383,040	-				-0.1
2,383,040	-				-0.2
2,383,040	-				+0.2
2,383,040	-				+0.3
2,383,040	-				-2.3
2,383,054	+				-2.2
2,383,178	+				+0.6
2,383,178	+				+0.1
2,383,179	-				+0.3
2,383,179	-				-0.8
2,383,179	-				-1.1
2,383,209	+				+0.9
2,383,284	+				-2.6
2,383,285	-				-1.4
2,383,394	+		Psest_2233	0.10	-0.6
2,383,394	+		Psest_2233	0.10	-0.4
2,383,395	-		Psest_2233	0.10	-0.6
2,383,482	+		Psest_2233	0.16	+0.9
2,383,482	+		Psest_2233	0.16	+0.9