Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c21310

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
2,204,217	+		PGA1_c21300	0.50	-2.0
2,204,272	-		PGA1_c21300	0.53	-0.3
2,204,272	-		PGA1_c21300	0.53	+0.6
2,204,375	-		PGA1_c21300	0.60	+0.3
2,204,375	-		PGA1_c21300	0.60	-0.0
2,204,439	-		PGA1_c21300	0.64	+2.0
2,204,467	+		PGA1_c21300	0.65	-0.0
2,204,493	+		PGA1_c21300	0.67	+0.7
2,204,498	+		PGA1_c21300	0.67	-0.8
2,204,535	+		PGA1_c21300	0.70	+2.6
2,204,591	+		PGA1_c21300	0.73	-0.0
2,204,599	-		PGA1_c21300	0.74	+1.0
2,204,599	-		PGA1_c21300	0.74	+1.8
2,204,660	-		PGA1_c21300	0.77	+0.3
2,204,700	+		PGA1_c21300	0.80	-1.0
2,204,700	+		PGA1_c21300	0.80	-2.0
2,204,782	-		PGA1_c21300	0.85	+0.3
2,204,814	+		PGA1_c21300	0.87	+0.3
2,204,814	+		PGA1_c21300	0.87	+1.9
2,204,814	+		PGA1_c21300	0.87	+0.6
2,204,814	+		PGA1_c21300	0.87	+2.6
2,204,814	+		PGA1_c21300	0.87	+1.0
2,204,822	-		PGA1_c21300	0.87	+1.4
2,204,822	-		PGA1_c21300	0.87	-0.3
2,204,827	-		PGA1_c21300	0.88	+1.0
2,204,873	+				+0.7
2,204,873	+				+2.4
2,204,881	-				-0.0
2,204,906	-				+1.0
2,204,934	+				-0.8
2,205,011	-				+0.5
2,205,017	+				-0.7
2,205,075	+				+3.6
2,205,078	-				-0.0
2,205,155	+				-0.2
2,205,184	-				-1.0
2,205,249	-				+2.8
2,205,315	-				+0.6
2,205,387	-		PGA1_c21310	0.13	-0.6
2,205,414	+		PGA1_c21310	0.15	-1.3
2,205,419	+		PGA1_c21310	0.15	-1.0
2,205,427	-		PGA1_c21310	0.16	+1.0
2,205,427	-		PGA1_c21310	0.16	+1.0
2,205,434	+		PGA1_c21310	0.16	+0.7
2,205,437	-		PGA1_c21310	0.17	+0.3
2,205,454	+		PGA1_c21310	0.18	+2.6
2,205,462	+		PGA1_c21310	0.18	+0.8
2,205,678	-		PGA1_c21310	0.34	+1.4
2,205,710	-		PGA1_c21310	0.36	-0.0
2,205,720	-		PGA1_c21310	0.37	+0.3
2,205,751	+		PGA1_c21310	0.39	-0.6
2,205,847	-		PGA1_c21310	0.46	+1.0
2,205,921	+		PGA1_c21310	0.51	+1.0
2,206,050	+		PGA1_c21310	0.61	+0.2
2,206,128	-		PGA1_c21310	0.66	-0.8
2,206,143	+		PGA1_c21310	0.67	+1.0
2,206,143	+		PGA1_c21310	0.67	+1.5
2,206,148	+		PGA1_c21310	0.68	+0.4
2,206,151	-		PGA1_c21310	0.68	+2.2
2,206,151	-		PGA1_c21310	0.68	+3.0
2,206,151	-		PGA1_c21310	0.68	+0.3
2,206,243	+		PGA1_c21310	0.74	+0.5
2,206,251	-		PGA1_c21310	0.75	+0.5
2,206,322	+		PGA1_c21310	0.80	+1.3
2,206,368	-		PGA1_c21310	0.83	-0.8
2,206,423	+		PGA1_c21310	0.87	-0.0
2,206,423	+		PGA1_c21310	0.87	+0.4
2,206,431	-		PGA1_c21310	0.88	-0.9
2,206,431	-		PGA1_c21310	0.88	-1.3
2,206,431	-		PGA1_c21310	0.88	+1.3
2,206,447	+		PGA1_c21310	0.89	-1.8
2,206,452	+		PGA1_c21310	0.89	-0.3
2,206,455	-		PGA1_c21310	0.90	-0.0
2,206,476	+				+0.4
2,206,481	+				+1.0
2,206,489	-				+0.8
2,206,590	-				-2.0
2,206,594	+				+1.6
2,206,601	+				-0.6
2,206,607	+				-0.2
2,206,615	-				-1.8
2,206,635	+				-1.6
2,206,635	+				+1.0
2,206,678	-				+0.8
2,206,720	-				-1.6
2,206,733	-				-0.6
2,206,733	-				-0.8
2,206,733	-				+1.0
2,206,733	-				+0.8
2,206,733	-				+1.0
2,206,733	-				+0.3
2,206,746	-				+0.4
2,206,746	-				+1.0
2,206,821	-				-0.0
2,206,832	+				+1.0
2,206,840	-				+0.4
2,206,866	-		PGA1_c21320	0.13	-1.6
2,206,881	+		PGA1_c21320	0.15	-0.2
2,206,942	+		PGA1_c21320	0.23	+1.0
2,207,036	-		PGA1_c21320	0.36	+0.8
2,207,064	-		PGA1_c21320	0.40	+0.5
2,207,079	+		PGA1_c21320	0.42	-1.3
2,207,088	+		PGA1_c21320	0.43	+1.6
2,207,177	+		PGA1_c21320	0.55	+0.5
2,207,177	+		PGA1_c21320	0.55	+0.8
2,207,185	-		PGA1_c21320	0.56	-0.1
2,207,264	-		PGA1_c21320	0.67	+1.6
2,207,339	-		PGA1_c21320	0.77	-0.1
2,207,351	-		PGA1_c21320	0.79	-0.5
2,207,429	+		PGA1_c21320	0.90	+0.6
2,207,468	+				+1.0
2,207,499	+				-0.5
2,207,507	-				+0.1
2,207,513	+				-0.5
2,207,519	+				+0.0
2,207,519	+				+0.4
2,207,527	-				+1.0
2,207,554	+				+2.0
2,207,555	-				-0.4
2,207,575	-				-0.3
2,207,591	+				-0.2