Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c20920

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
2,168,264	-				+0.5
2,168,278	-				-0.6
2,168,470	-		PGA1_c20910	0.12	+0.1
2,168,597	+		PGA1_c20910	0.35	+0.4
2,168,608	-		PGA1_c20910	0.37	+0.0
2,168,657	+		PGA1_c20910	0.45	+1.0
2,168,705	+		PGA1_c20910	0.54	-1.0
2,168,705	+		PGA1_c20910	0.54	-0.6
2,168,705	+		PGA1_c20910	0.54	+0.0
2,168,705	+		PGA1_c20910	0.54	+0.5
2,168,705	+		PGA1_c20910	0.54	-0.2
2,168,713	-		PGA1_c20910	0.55	-1.0
2,168,910	-				+1.3
2,168,910	-				+3.8
2,168,910	-				+0.1
2,168,944	+				+0.4
2,168,952	-				-0.9
2,168,952	-				-1.1
2,168,973	+				-1.3
2,168,978	+				-1.3
2,168,986	-				-0.2
2,168,999	+				+2.6
2,168,999	+				-0.2
2,169,007	-				+1.0
2,169,019	+				+0.6
2,169,027	+				+0.6
2,169,027	+				+0.1
2,169,027	+				+1.3
2,169,027	+				+0.8
2,169,035	-				+0.0
2,169,035	-				+1.3
2,169,035	-				+1.4
2,169,081	-				-0.6
2,169,102	-				-1.0
2,169,114	+				-0.7
2,169,122	-				-1.0
2,169,122	-				+0.3
2,169,156	+				+0.5
2,169,156	+				+0.0
2,169,164	+				+0.8
2,169,167	-				-1.3
2,169,167	-				-0.9
2,169,167	-				-1.9
2,169,212	-				+1.2
2,169,325	-		PGA1_c20920	0.20	+1.6
2,169,335	-		PGA1_c20920	0.22	+0.8
2,169,457	-		PGA1_c20920	0.50	+0.4
2,169,541	-		PGA1_c20920	0.69	+0.7
2,169,541	-		PGA1_c20920	0.69	-0.6
2,169,545	+		PGA1_c20920	0.70	+2.0
2,169,553	-		PGA1_c20920	0.71	+2.0
2,169,698	-				+1.5
2,169,962	-				-0.3
2,169,982	+				-0.9
2,170,010	-		PGA1_c20930	0.11	+1.3
2,170,017	+		PGA1_c20930	0.11	+0.3
2,170,022	+		PGA1_c20930	0.11	-0.4
2,170,025	-		PGA1_c20930	0.12	+0.0
2,170,090	+		PGA1_c20930	0.15	+1.3
2,170,098	+		PGA1_c20930	0.16	-1.5
2,170,172	+		PGA1_c20930	0.20	+0.0
2,170,192	+		PGA1_c20930	0.21	+0.5
2,170,207	+		PGA1_c20930	0.22	+0.3
2,170,215	-		PGA1_c20930	0.22	+2.0
2,170,261	+		PGA1_c20930	0.25	+0.7
2,170,261	+		PGA1_c20930	0.25	+1.5
2,170,261	+		PGA1_c20930	0.25	-0.6
2,170,269	-		PGA1_c20930	0.25	-0.9
2,170,269	-		PGA1_c20930	0.25	-0.8
2,170,303	+		PGA1_c20930	0.27	-0.6
2,170,333	+		PGA1_c20930	0.28	+0.7
2,170,333	+		PGA1_c20930	0.28	-1.6
2,170,333	+		PGA1_c20930	0.28	+1.1
2,170,341	-		PGA1_c20930	0.29	-0.5
2,170,342	-		PGA1_c20930	0.29	+1.0
2,170,348	-		PGA1_c20930	0.29	-1.2
2,170,360	+		PGA1_c20930	0.30	-2.3
2,170,368	-		PGA1_c20930	0.30	-0.6
2,170,375	+		PGA1_c20930	0.31	+0.6
2,170,383	+		PGA1_c20930	0.31	+0.9
2,170,391	-		PGA1_c20930	0.32	+0.8
2,170,413	+		PGA1_c20930	0.33	+0.2
2,170,437	+		PGA1_c20930	0.34	+0.2
2,170,603	+		PGA1_c20930	0.43	-2.0
2,170,611	-		PGA1_c20930	0.44	+0.0
2,170,638	+		PGA1_c20930	0.45	+1.0
2,170,638	+		PGA1_c20930	0.45	+0.3
2,170,638	+		PGA1_c20930	0.45	-2.7
2,170,638	+		PGA1_c20930	0.45	-0.3
2,170,646	-		PGA1_c20930	0.46	-0.6
2,170,646	-		PGA1_c20930	0.46	-0.1
2,170,646	-		PGA1_c20930	0.46	+0.6
2,170,646	-		PGA1_c20930	0.46	-0.1
2,170,646	-		PGA1_c20930	0.46	+2.7