Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c20680

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
2,142,382	-				-0.3
2,142,418	+				-0.1
2,142,450	-				+0.1
2,142,462	+				+1.4
2,142,608	+		PGA1_c20670	0.22	-2.0
2,142,613	-		PGA1_c20670	0.23	-0.0
2,142,630	-		PGA1_c20670	0.25	-1.2
2,142,665	-		PGA1_c20670	0.30	-0.0
2,142,694	+		PGA1_c20670	0.35	-1.1
2,142,699	+		PGA1_c20670	0.35	+0.4
2,142,707	-		PGA1_c20670	0.37	-0.8
2,142,745	-		PGA1_c20670	0.42	+2.0
2,142,793	+		PGA1_c20670	0.49	-0.6
2,142,808	-		PGA1_c20670	0.51	-0.8
2,142,839	+		PGA1_c20670	0.56	-1.0
2,142,847	-		PGA1_c20670	0.57	-0.0
2,142,902	-		PGA1_c20670	0.65	-0.9
2,142,912	+		PGA1_c20670	0.67	-0.6
2,142,937	-		PGA1_c20670	0.71	-2.3
2,143,104	-				-2.1
2,143,120	+				+0.8
2,143,121	+				+0.4
2,143,153	-				-0.2
2,143,352	+		PGA1_c20680	0.11	-0.9
2,143,360	-		PGA1_c20680	0.11	-1.2
2,143,360	-		PGA1_c20680	0.11	-0.2
2,143,411	+		PGA1_c20680	0.17	-0.7
2,143,411	+		PGA1_c20680	0.17	+1.1
2,143,419	-		PGA1_c20680	0.17	+0.1
2,143,419	-		PGA1_c20680	0.17	+0.2
2,143,419	-		PGA1_c20680	0.17	-0.1
2,143,498	-		PGA1_c20680	0.25	+0.8
2,143,498	-		PGA1_c20680	0.25	-0.0
2,143,499	+		PGA1_c20680	0.25	-1.0
2,143,518	+		PGA1_c20680	0.27	+0.6
2,143,533	+		PGA1_c20680	0.29	-1.0
2,143,533	+		PGA1_c20680	0.29	+0.1
2,143,566	+		PGA1_c20680	0.32	-2.6
2,143,572	-		PGA1_c20680	0.33	-0.6
2,143,591	+		PGA1_c20680	0.35	+1.4
2,143,701	-		PGA1_c20680	0.46	-2.2
2,143,701	-		PGA1_c20680	0.46	+0.9
2,143,701	-		PGA1_c20680	0.46	+0.8
2,143,701	-		PGA1_c20680	0.46	-0.3
2,143,715	+		PGA1_c20680	0.47	-0.5
2,143,715	+		PGA1_c20680	0.47	+0.2
2,143,717	+		PGA1_c20680	0.47	-0.8
2,143,717	+		PGA1_c20680	0.47	-1.0
2,143,843	+		PGA1_c20680	0.60	-0.7
2,143,964	+		PGA1_c20680	0.72	-0.1
2,143,972	-		PGA1_c20680	0.73	+0.2
2,143,972	-		PGA1_c20680	0.73	-1.6
2,144,010	-		PGA1_c20680	0.76	-1.1
2,144,054	+		PGA1_c20680	0.81	-0.8
2,144,113	+		PGA1_c20680	0.87	+0.3
2,144,113	+		PGA1_c20680	0.87	-0.6
2,144,121	-		PGA1_c20680	0.87	+0.7
2,144,121	-		PGA1_c20680	0.87	-2.4
2,144,121	-		PGA1_c20680	0.87	-0.9
2,144,126	+		PGA1_c20680	0.88	+0.6
2,144,200	+				-3.2
2,144,292	-				-0.8
2,144,300	-				-1.4
2,144,301	+				+0.2
2,144,323	-				-2.7
2,144,325	+				-0.8
2,144,325	+				-0.4
2,144,333	-				-0.2
2,144,418	+				-0.8
2,144,418	+				+0.4
2,144,426	-				-3.1
2,144,426	-				-2.0
2,144,451	+				-2.5
2,144,451	+				+1.0
2,144,453	-				-1.6
2,144,453	-				+0.7
2,144,459	-				-1.8
2,144,459	-				+0.2
2,144,504	+				+0.9
2,144,562	+				-0.7
2,144,571	-				+0.5
2,144,598	+				-0.0
2,144,627	+				+0.3
2,144,629	-				-0.4
2,144,655	-				-1.0
2,144,655	-				+0.3
2,144,748	-				-1.5
2,144,807	-				-1.5
2,144,844	-				+1.7
2,144,855	-				+1.0
2,144,906	+				+0.7
2,144,937	+				+1.4
2,145,101	+		PGA1_c20690	0.14	-0.9
2,145,130	-		PGA1_c20690	0.16	+1.0
2,145,135	-		PGA1_c20690	0.17	-1.0