Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c19310

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
2,006,832	+		PGA1_c19300	0.27	-1.4
2,006,846	-		PGA1_c19300	0.29	-1.0
2,006,896	+		PGA1_c19300	0.33	-1.4
2,006,901	+		PGA1_c19300	0.33	-0.5
2,006,911	+		PGA1_c19300	0.34	-0.0
2,006,919	-		PGA1_c19300	0.35	-2.5
2,006,988	+		PGA1_c19300	0.41	-0.1
2,007,125	+		PGA1_c19300	0.52	+0.3
2,007,125	+		PGA1_c19300	0.52	+1.5
2,007,133	-		PGA1_c19300	0.53	+0.5
2,007,146	+		PGA1_c19300	0.54	-1.4
2,007,157	-		PGA1_c19300	0.55	-0.4
2,007,191	-		PGA1_c19300	0.58	-0.0
2,007,258	-		PGA1_c19300	0.63	-1.5
2,007,279	+		PGA1_c19300	0.65	-0.3
2,007,313	+		PGA1_c19300	0.68	+1.0
2,007,313	+		PGA1_c19300	0.68	-1.3
2,007,313	+		PGA1_c19300	0.68	-0.2
2,007,313	+		PGA1_c19300	0.68	-1.6
2,007,313	+		PGA1_c19300	0.68	+0.4
2,007,313	+		PGA1_c19300	0.68	-0.8
2,007,321	-		PGA1_c19300	0.68	+1.0
2,007,321	-		PGA1_c19300	0.68	+0.1
2,007,374	+		PGA1_c19300	0.73	+0.2
2,007,382	-		PGA1_c19300	0.74	-0.3
2,007,418	+		PGA1_c19300	0.77	-1.1
2,007,431	+		PGA1_c19300	0.78	+0.6
2,007,520	+		PGA1_c19300	0.85	+1.0
2,007,544	+		PGA1_c19300	0.87	-0.8
2,007,612	-				-0.0
2,007,620	-				-0.1
2,007,687	-				+0.5
2,007,687	-				+1.0
2,007,730	-				+0.3
2,007,770	+				+0.6
2,007,779	-				-0.1
2,007,812	+				-0.4
2,007,883	-				+0.6
2,007,891	+				-0.5
2,007,969	-				-1.8
2,007,969	-				-1.7
2,007,969	-				-0.2
2,007,971	+				-0.5
2,008,107	-		PGA1_c19310	0.14	-0.0
2,008,199	+		PGA1_c19310	0.18	+0.1
2,008,221	+		PGA1_c19310	0.19	-0.2
2,008,247	-		PGA1_c19310	0.21	-2.0
2,008,322	-		PGA1_c19310	0.24	-0.4
2,008,322	-		PGA1_c19310	0.24	-2.7
2,008,331	+		PGA1_c19310	0.25	-0.3
2,008,351	-		PGA1_c19310	0.26	-0.5
2,008,353	+		PGA1_c19310	0.26	-0.6
2,008,353	+		PGA1_c19310	0.26	+0.3
2,008,353	+		PGA1_c19310	0.26	+0.6
2,008,353	+		PGA1_c19310	0.26	-1.0
2,008,361	-		PGA1_c19310	0.26	+2.2
2,008,361	-		PGA1_c19310	0.26	-1.3
2,008,361	-		PGA1_c19310	0.26	+0.7
2,008,361	-		PGA1_c19310	0.26	-0.8
2,008,376	+		PGA1_c19310	0.27	-1.5
2,008,381	-		PGA1_c19310	0.27	-0.3
2,008,393	+		PGA1_c19310	0.28	-0.7
2,008,393	+		PGA1_c19310	0.28	-1.3
2,008,398	+		PGA1_c19310	0.28	-1.6
2,008,401	-		PGA1_c19310	0.28	-0.3
2,008,406	-		PGA1_c19310	0.28	-0.4
2,008,466	-		PGA1_c19310	0.31	-3.3
2,008,466	-		PGA1_c19310	0.31	-2.0
2,008,551	+		PGA1_c19310	0.35	+0.6
2,008,551	+		PGA1_c19310	0.35	+1.5
2,008,551	+		PGA1_c19310	0.35	-0.0
2,008,559	-		PGA1_c19310	0.36	+0.2
2,008,588	+		PGA1_c19310	0.37	-0.0
2,008,618	-		PGA1_c19310	0.39	+1.0
2,008,639	+		PGA1_c19310	0.40	-1.3
2,008,639	+		PGA1_c19310	0.40	+0.2
2,008,642	-		PGA1_c19310	0.40	-0.2
2,008,644	+		PGA1_c19310	0.40	-1.8
2,008,656	+		PGA1_c19310	0.41	-0.4
2,008,659	-		PGA1_c19310	0.41	-0.5
2,008,659	-		PGA1_c19310	0.41	+0.4
2,008,698	-		PGA1_c19310	0.43	-1.0
2,008,749	+		PGA1_c19310	0.45	+0.6
2,008,764	-		PGA1_c19310	0.46	-0.5
2,008,798	+		PGA1_c19310	0.47	+0.1
2,008,838	-		PGA1_c19310	0.49	-1.6
2,008,996	+		PGA1_c19310	0.57	+1.0
2,009,086	-		PGA1_c19310	0.61	-0.7
2,009,169	+		PGA1_c19310	0.65	-0.6
2,009,238	+		PGA1_c19310	0.69	-0.9
2,009,316	+		PGA1_c19310	0.72	-0.3
2,009,333	-		PGA1_c19310	0.73	-0.1
2,009,340	-		PGA1_c19310	0.74	-0.3
2,009,371	-		PGA1_c19310	0.75	-1.0
2,009,376	+		PGA1_c19310	0.75	-1.4
2,009,393	+		PGA1_c19310	0.76	-0.6
2,009,423	+		PGA1_c19310	0.78	+1.6
2,009,431	+		PGA1_c19310	0.78	-1.3
2,009,437	-		PGA1_c19310	0.78	+0.7
2,009,437	-		PGA1_c19310	0.78	-2.4
2,009,615	+		PGA1_c19310	0.87	-1.3
2,009,688	+				+1.0
2,009,696	-				+0.3
2,009,754	+				+0.5
2,009,787	+				-1.0
2,009,797	+				-0.0
2,009,912	-				-0.9
2,009,912	-				+0.8
2,009,982	-				+0.6
2,009,987	-				-0.1
2,009,987	-				-1.3
2,009,987	-				-0.3