Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c18750

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
1,944,936	-				+1.2
1,944,941	+				-2.4
1,944,941	+				-0.0
1,944,949	-				-0.0
1,944,949	-				+1.0
1,944,949	-				+1.0
1,944,996	-				+0.1
1,944,996	-				-0.8
1,945,006	-				-1.5
1,945,011	-				+1.3
1,945,013	-				-0.0
1,945,131	+		PGA1_c18740	0.24	-0.0
1,945,144	-		PGA1_c18740	0.25	+1.0
1,945,152	+		PGA1_c18740	0.26	-2.0
1,945,164	+		PGA1_c18740	0.28	+0.4
1,945,200	+		PGA1_c18740	0.33	+1.8
1,945,208	-		PGA1_c18740	0.34	-2.2
1,945,245	-		PGA1_c18740	0.39	+0.6
1,945,324	-		PGA1_c18740	0.49	+0.7
1,945,353	-		PGA1_c18740	0.53	+1.0
1,945,452	-		PGA1_c18740	0.66	-2.8
1,945,462	-		PGA1_c18740	0.67	-1.8
1,945,463	+		PGA1_c18740	0.67	+0.5
1,945,463	+		PGA1_c18740	0.67	-0.0
1,945,463	+		PGA1_c18740	0.67	-0.2
1,945,471	-		PGA1_c18740	0.68	+0.8
1,945,471	-		PGA1_c18740	0.68	-0.6
1,945,471	-		PGA1_c18740	0.68	+0.5
1,945,479	+		PGA1_c18740	0.69	+1.0
1,945,479	+		PGA1_c18740	0.69	-0.0
1,945,487	-		PGA1_c18740	0.70	+0.2
1,945,487	-		PGA1_c18740	0.70	+0.7
1,945,508	-		PGA1_c18740	0.73	+0.8
1,945,510	+		PGA1_c18740	0.73	-0.1
1,945,511	+		PGA1_c18740	0.73	+0.5
1,945,537	-		PGA1_c18740	0.77	-0.6
1,945,544	+		PGA1_c18740	0.78	-0.0
1,945,568	-		PGA1_c18740	0.81	+1.7
1,945,607	+		PGA1_c18740	0.86	-0.3
1,945,631	-		PGA1_c18740	0.89	-0.0
1,945,768	+				+1.2
1,945,776	-				-0.6
1,945,776	-				-1.8
1,945,818	+				-0.3
1,945,820	+				+0.4
1,945,940	+				-0.0
1,945,956	-				-1.5
1,945,977	+				-0.0
1,945,985	-				+0.1
1,946,015	-		PGA1_c18750	0.11	-1.3
1,946,019	+		PGA1_c18750	0.12	+0.5
1,946,054	+		PGA1_c18750	0.14	-1.3
1,946,062	-		PGA1_c18750	0.15	-1.6
1,946,191	+		PGA1_c18750	0.24	-0.3
1,946,191	+		PGA1_c18750	0.24	-0.2
1,946,199	-		PGA1_c18750	0.25	-0.2
1,946,199	-		PGA1_c18750	0.25	-0.6
1,946,200	-		PGA1_c18750	0.25	-0.0
1,946,211	+		PGA1_c18750	0.25	+0.9
1,946,211	+		PGA1_c18750	0.25	+0.2
1,946,211	+		PGA1_c18750	0.25	-0.3
1,946,211	+		PGA1_c18750	0.25	-0.6
1,946,216	+		PGA1_c18750	0.26	-2.0
1,946,219	-		PGA1_c18750	0.26	+1.0
1,946,219	-		PGA1_c18750	0.26	+2.0
1,946,219	-		PGA1_c18750	0.26	-0.6
1,946,219	-		PGA1_c18750	0.26	-0.8
1,946,219	-		PGA1_c18750	0.26	-1.3
1,946,230	+		PGA1_c18750	0.27	-0.8
1,946,276	+		PGA1_c18750	0.30	-1.3
1,946,289	-		PGA1_c18750	0.31	+0.6
1,946,311	-		PGA1_c18750	0.33	-0.8
1,946,311	-		PGA1_c18750	0.33	-0.0
1,946,326	-		PGA1_c18750	0.34	-0.2
1,946,326	-		PGA1_c18750	0.34	-0.3
1,946,350	-		PGA1_c18750	0.35	-0.8
1,946,391	+		PGA1_c18750	0.38	+0.7
1,946,431	+		PGA1_c18750	0.41	+1.0
1,946,454	-		PGA1_c18750	0.43	+1.3
1,946,470	+		PGA1_c18750	0.44	+1.0
1,946,470	+		PGA1_c18750	0.44	-0.3
1,946,478	+		PGA1_c18750	0.45	+0.3
1,946,478	-		PGA1_c18750	0.45	-0.8
1,946,478	-		PGA1_c18750	0.45	+1.0
1,946,478	-		PGA1_c18750	0.45	-0.6
1,946,517	+		PGA1_c18750	0.47	-0.6
1,946,525	-		PGA1_c18750	0.48	-1.1
1,946,556	+		PGA1_c18750	0.50	-2.3
1,946,564	-		PGA1_c18750	0.51	-1.6
1,946,619	+		PGA1_c18750	0.55	+1.0
1,946,639	+		PGA1_c18750	0.56	-2.9
1,946,639	+		PGA1_c18750	0.56	-0.3
1,946,647	-		PGA1_c18750	0.57	-1.3
1,946,647	-		PGA1_c18750	0.57	-1.8
1,946,687	-		PGA1_c18750	0.60	-0.6
1,946,707	+		PGA1_c18750	0.61	+1.0
1,946,707	+		PGA1_c18750	0.61	+0.2
1,946,707	+		PGA1_c18750	0.61	-0.3
1,946,707	+		PGA1_c18750	0.61	-0.2
1,946,707	+		PGA1_c18750	0.61	+2.6
1,946,715	-		PGA1_c18750	0.62	-0.4
1,946,715	-		PGA1_c18750	0.62	-2.3
1,946,715	-		PGA1_c18750	0.62	-0.0
1,946,715	-		PGA1_c18750	0.62	-0.0
1,946,715	-		PGA1_c18750	0.62	+0.6
1,946,715	-		PGA1_c18750	0.62	-2.2
1,946,715	-		PGA1_c18750	0.62	-0.2
1,946,757	+		PGA1_c18750	0.65	-0.6
1,946,841	-		PGA1_c18750	0.71	+2.0
1,946,873	-		PGA1_c18750	0.73	-0.6
1,946,873	-		PGA1_c18750	0.73	-1.3
1,946,873	-		PGA1_c18750	0.73	-1.8
1,946,967	-		PGA1_c18750	0.80	-1.2
1,946,994	+		PGA1_c18750	0.82	+0.2
1,947,016	+		PGA1_c18750	0.83	-2.9
1,947,024	-		PGA1_c18750	0.84	+2.3
1,947,115	-				-1.8
1,947,120	-				-0.6
1,947,120	-				+1.0
1,947,125	+				-0.2
1,947,138	-				+0.1
1,947,174	-				-2.6
1,947,178	-				-0.7
1,947,222	-				-2.3
1,947,242	-				+1.8
1,947,257	-				-1.6
1,947,307	-				-0.0
1,947,383	-				-2.9
1,947,394	+		PGA1_c18760	0.11	+2.0
1,947,394	+		PGA1_c18760	0.11	+2.0
1,947,432	-		PGA1_c18760	0.18	+0.6
1,947,483	+		PGA1_c18760	0.27	-0.4
1,947,496	+		PGA1_c18760	0.29	-0.5
1,947,504	-		PGA1_c18760	0.30	-0.9
1,947,530	-		PGA1_c18760	0.35	-0.5
1,947,558	+		PGA1_c18760	0.40	+0.7
1,947,577	-		PGA1_c18760	0.43	+1.4
1,947,587	+		PGA1_c18760	0.45	+2.0
1,947,619	+		PGA1_c18760	0.51	+0.8
1,947,627	-		PGA1_c18760	0.52	+0.4
1,947,637	-		PGA1_c18760	0.54	+1.2
1,947,706	+		PGA1_c18760	0.66	-0.5
1,947,754	-		PGA1_c18760	0.75	+0.4
1,947,784	-		PGA1_c18760	0.80	-0.0
1,947,862	+				-3.3
1,947,870	-				+0.1
1,947,886	+				-1.0
1,947,964	-				+0.8
1,947,964	-				-1.0
1,947,967	+				+0.4
1,947,983	+				+0.5
1,948,049	+				+0.1
1,948,051	-				+0.3
1,948,062	+				+0.1
1,948,067	+				-0.4
1,948,080	-				+1.6
1,948,085	-				+0.7
1,948,103	-				+0.2
1,948,104	+				-0.4
1,948,104	+				-0.8
1,948,151	+		PGA1_c18770	0.13	-0.3