Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c18610

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
1,934,186	+				+1.0
1,934,193	-				+4.2
1,934,235	-		PGA1_c18600	0.13	-0.0
1,934,236	-		PGA1_c18600	0.13	+3.2
1,934,241	+		PGA1_c18600	0.14	+0.1
1,934,259	-		PGA1_c18600	0.16	+0.5
1,934,267	-		PGA1_c18600	0.16	+2.5
1,934,333	-		PGA1_c18600	0.24	+1.9
1,934,340	-		PGA1_c18600	0.24	+1.4
1,934,340	-		PGA1_c18600	0.24	+0.8
1,934,350	-		PGA1_c18600	0.26	+3.3
1,934,350	-		PGA1_c18600	0.26	+2.6
1,934,398	+		PGA1_c18600	0.31	+0.9
1,934,635	-		PGA1_c18600	0.57	+0.4
1,934,641	+		PGA1_c18600	0.58	+2.2
1,934,738	+		PGA1_c18600	0.69	+2.0
1,934,746	-		PGA1_c18600	0.69	+1.6
1,934,746	-		PGA1_c18600	0.69	+1.7
1,934,746	-		PGA1_c18600	0.69	+1.2
1,934,750	+		PGA1_c18600	0.70	-0.6
1,934,752	+		PGA1_c18600	0.70	-0.8
1,934,758	-		PGA1_c18600	0.71	+1.7
1,934,758	-		PGA1_c18600	0.71	+1.3
1,934,906	-		PGA1_c18600	0.87	+0.5
1,934,910	+		PGA1_c18600	0.88	+2.1
1,934,912	+		PGA1_c18600	0.88	+0.4
1,934,912	+		PGA1_c18600	0.88	+0.8
1,934,912	+		PGA1_c18600	0.88	-0.4
1,934,912	+		PGA1_c18600	0.88	+0.1
1,934,920	-		PGA1_c18600	0.89	-0.1
1,934,920	-		PGA1_c18600	0.89	-1.0
1,934,920	-		PGA1_c18600	0.89	+2.2
1,934,922	+		PGA1_c18600	0.89	+0.6
1,934,922	+		PGA1_c18600	0.89	-0.0
1,934,922	+		PGA1_c18600	0.89	-2.2
1,934,922	+		PGA1_c18600	0.89	+1.5
1,934,922	+		PGA1_c18600	0.89	+1.3
1,934,922	+		PGA1_c18600	0.89	+1.4
1,934,922	+		PGA1_c18600	0.89	+1.8
1,934,922	+		PGA1_c18600	0.89	+1.0
1,934,922	+		PGA1_c18600	0.89	+1.7
1,934,922	+		PGA1_c18600	0.89	+1.0
1,934,922	+		PGA1_c18600	0.89	-1.0
1,934,922	+		PGA1_c18600	0.89	-0.6
1,934,930	-		PGA1_c18600	0.90	+1.0
1,934,930	-		PGA1_c18600	0.90	-3.6
1,934,930	-		PGA1_c18600	0.90	+1.5
1,934,930	-		PGA1_c18600	0.90	+2.2
1,934,930	-		PGA1_c18600	0.90	-2.1
1,934,930	-		PGA1_c18600	0.90	+0.3
1,934,930	-		PGA1_c18600	0.90	+0.5
1,934,930	-		PGA1_c18600	0.90	+1.2
1,934,930	-		PGA1_c18600	0.90	+1.0
1,934,938	-				+1.6
1,934,938	-				+0.1
1,934,938	-				+0.5
1,934,969	+				+1.3
1,934,977	-				+3.0
1,934,997	-				+1.0
1,935,015	+				+2.4
1,935,044	+				+0.5
1,935,044	+				+2.4
1,935,052	-				+1.1
1,935,052	-				-1.0
1,935,054	-				-1.0
1,935,061	+				+2.8
1,935,069	-				+3.3
1,935,189	+				+0.5
1,935,204	-		PGA1_c18610	0.10	+0.5
1,935,218	-		PGA1_c18610	0.13	-0.5
1,935,260	+		PGA1_c18610	0.21	+1.5
1,935,260	+		PGA1_c18610	0.21	-1.2
1,935,311	-		PGA1_c18610	0.31	-1.0
1,935,313	-		PGA1_c18610	0.32	-0.6
1,935,366	-		PGA1_c18610	0.42	+3.0
1,935,366	-		PGA1_c18610	0.42	+0.3
1,935,366	-		PGA1_c18610	0.42	-0.2
1,935,402	-		PGA1_c18610	0.49	-1.9
1,935,481	+		PGA1_c18610	0.65	-0.6
1,935,519	+		PGA1_c18610	0.72	+1.0
1,935,519	+		PGA1_c18610	0.72	+1.3
1,935,532	+		PGA1_c18610	0.75	-0.6
1,935,542	+		PGA1_c18610	0.77	-0.6
1,935,544	+		PGA1_c18610	0.77	+2.2
1,935,546	+		PGA1_c18610	0.78	-0.0
1,935,565	+		PGA1_c18610	0.81	-0.0
1,935,566	+		PGA1_c18610	0.81	-0.2
1,935,566	+		PGA1_c18610	0.81	+0.3
1,935,600	-		PGA1_c18610	0.88	+0.4
1,935,619	-				-0.3
1,935,683	-				-1.0
1,935,687	+				-0.6
1,935,709	+				-0.9
1,935,709	+				+0.4
1,935,717	-		PGA1_c18620	0.10	+2.4
1,935,717	-		PGA1_c18620	0.10	-0.0
1,935,717	-		PGA1_c18620	0.10	+1.7
1,935,717	-		PGA1_c18620	0.10	+1.2
1,935,717	-		PGA1_c18620	0.10	+2.0
1,935,728	+		PGA1_c18620	0.15	-0.0
1,935,743	-		PGA1_c18620	0.21	+0.3
1,935,753	-		PGA1_c18620	0.25	+1.7
1,935,778	-		PGA1_c18620	0.35	-1.5
1,935,778	-		PGA1_c18620	0.35	-0.7
1,935,802	+		PGA1_c18620	0.45	-0.0
1,935,802	+		PGA1_c18620	0.45	-2.6
1,935,810	-		PGA1_c18620	0.49	+0.5
1,935,817	-		PGA1_c18620	0.51	-0.8
1,935,962	-				-0.6
1,936,002	+				-1.5
1,936,006	+				+0.4
1,936,042	+				-0.6
1,936,109	+				-1.2
1,936,109	+				-3.0
1,936,109	+				-1.4
1,936,109	+				+2.0
1,936,117	-				-1.0
1,936,117	-				+0.7
1,936,117	-				-1.0
1,936,117	-				+2.2
1,936,117	-				+0.4
1,936,127	-				+0.8
1,936,152	-				-0.6
1,936,168	-				-0.6
1,936,174	-				+0.6
1,936,237	+				+1.4
1,936,238	+				+1.2
1,936,297	+				+0.5
1,936,369	-				+1.5
1,936,410	-				+2.2
1,936,415	-				+0.1
1,936,420	+				-0.0
1,936,428	-				+1.0
1,936,449	+		PGA1_c18630	0.16	-1.0
1,936,449	+		PGA1_c18630	0.16	+2.2
1,936,474	-		PGA1_c18630	0.26	-0.0
1,936,476	+		PGA1_c18630	0.27	-1.2
1,936,558	-		PGA1_c18630	0.63	+2.0
1,936,580	+		PGA1_c18630	0.72	-0.6
1,936,659	+				-2.2