Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c17240

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
1,799,289	+				-0.3
1,799,299	+				-0.7
1,799,319	-				+0.5
1,799,345	+				+0.3
1,799,353	-				-2.9
1,799,378	+				-0.6
1,799,386	-				+0.8
1,799,401	-				+1.5
1,799,401	-				+0.2
1,799,419	-				+1.9
1,799,425	-				+1.7
1,799,536	-				+0.1
1,799,559	+				+0.1
1,799,559	+				-0.0
1,799,559	+				-1.1
1,799,559	+				-1.8
1,799,559	+				-0.6
1,799,559	+				+0.6
1,799,559	+				+0.4
1,799,559	+				-2.0
1,799,559	+				+0.4
1,799,559	+				-0.0
1,799,559	+				+0.2
1,799,559	+				-0.0
1,799,559	+				+0.6
1,799,559	+				+0.8
1,799,559	+				+0.2
1,799,559	-				+1.9
1,799,565	-				+0.3
1,799,567	-				+0.6
1,799,567	-				-0.3
1,799,567	-				-2.2
1,799,567	-				-0.5
1,799,567	-				-0.8
1,799,567	-				-1.6
1,799,567	-				+0.6
1,799,567	-				-0.9
1,799,567	-				-0.5
1,799,567	-				+0.2
1,799,567	-				+1.3
1,799,567	-				+1.0
1,799,567	-				+0.4
1,799,567	-				-0.3
1,799,577	-				-2.0
1,799,584	+				+1.0
1,799,592	-				-0.2
1,799,596	+				-0.7
1,799,603	+				+0.4
1,799,603	+				+0.5
1,799,603	+				-2.4
1,799,603	+				-0.2
1,799,611	-				-0.4
1,799,611	-				-0.2
1,799,612	-				+0.4
1,799,623	-				+0.1
1,799,662	-				+1.6
1,799,668	+				-0.8
1,799,692	-				+0.5
1,799,693	-				+1.0
1,799,703	-				+1.7
1,799,703	-				-0.3
1,799,703	-				-0.3
1,799,749	-				+0.4
1,799,758	+				-1.2
1,799,783	-				-1.6
1,799,783	-				+0.2
1,799,783	-				-1.6
1,799,787	+				-0.6
1,799,795	-				+1.4
1,799,798	+				-0.1
1,799,798	+				-0.4
1,799,798	+				+0.6
1,799,798	+				-0.3
1,799,798	+				-0.0
1,799,805	+				+0.4
1,799,805	-				+0.6
1,799,806	-				-0.0
1,799,806	-				+0.1
1,799,806	-				+0.4
1,799,806	-				-1.3
1,799,810	+				-1.2
1,799,817	+				-0.6
1,799,817	+				-0.7
1,799,853	+				+0.2
1,799,861	-				-0.5
1,799,878	+				+1.5
1,799,883	+				-0.4
1,799,921	+				-0.6
1,799,926	+				-0.0
1,799,929	-				+1.2
1,799,987	+				+0.2
1,799,996	+				-0.8
1,799,999	-				-1.0
1,799,999	-				-1.9
1,800,035	+				-0.2
1,800,038	-				-0.3
1,800,038	-				+2.6
1,800,043	-				-1.6
1,800,043	-				-2.2
1,800,048	-				-0.6
1,800,051	+				+0.3
1,800,051	+				-2.2
1,800,051	+				+1.0
1,800,056	+				-0.6
1,800,056	+				+0.3
1,800,056	+				+0.2
1,800,061	+				-0.3
1,800,062	+				-1.6
1,800,064	-				+1.0
1,800,064	-				-1.2
1,800,064	-				+3.3
1,800,064	-				-0.6
1,800,064	-				-1.6
1,800,064	-				+0.5
1,800,064	-				-0.0
1,800,077	+				-1.0
1,800,077	+				+0.6
1,800,122	+				-1.0
1,800,122	+				-0.9
1,800,130	-				-1.8
1,800,138	-				+0.1
1,800,150	+				-0.4
1,800,167	-				-0.1
1,800,178	+				+1.1
1,800,202	+				-0.5
1,800,205	-				+0.2
1,800,234	+				-0.3
1,800,234	+				-0.3
1,800,235	-				-1.1
1,800,242	-				-0.0
1,800,242	-				-1.5
1,800,242	-				+0.1
1,800,242	-				+0.6
1,800,242	-				+1.0
1,800,242	-				+0.5
1,800,242	-				-0.0
1,800,257	+				-0.5
1,800,301	-				-0.0
1,800,370	+		PGA1_c17240	0.14	-2.2
1,800,384	+		PGA1_c17240	0.16	-1.1
1,800,392	-		PGA1_c17240	0.16	+0.0
1,800,392	-		PGA1_c17240	0.16	-0.6
1,800,433	+		PGA1_c17240	0.21	+0.4
1,800,441	-		PGA1_c17240	0.22	-0.5
1,800,441	-		PGA1_c17240	0.22	-1.5
1,800,475	+		PGA1_c17240	0.25	-1.0
1,800,493	-		PGA1_c17240	0.27	-1.6
1,800,514	-		PGA1_c17240	0.29	+0.7
1,800,539	+		PGA1_c17240	0.32	-2.3
1,800,547	-		PGA1_c17240	0.33	-0.3
1,800,594	-		PGA1_c17240	0.38	-1.9
1,800,717	+		PGA1_c17240	0.51	-0.6
1,800,746	+		PGA1_c17240	0.54	+1.0
1,800,767	-		PGA1_c17240	0.56	-2.7
1,800,776	+		PGA1_c17240	0.57	+0.1
1,800,885	-		PGA1_c17240	0.68	-0.0
1,801,088	-		PGA1_c17240	0.90	-1.8
1,801,219	+				-1.6
1,801,221	-				+1.0
1,801,227	-				+0.2
1,801,232	-				+0.2
1,801,232	-				-0.8
1,801,245	+				-1.7
1,801,253	-				+1.0
1,801,292	+				-0.5
1,801,292	+				-1.2
1,801,318	+				+0.7
1,801,361	+				+0.6
1,801,369	-				+0.6
1,801,458	-				+0.6
1,801,516	+				-1.3
1,801,542	-				-0.4
1,801,559	+				+0.2
1,801,566	+				-0.0
1,801,670	+		PGA1_c17250	0.20	+0.8
1,801,716	+		PGA1_c17250	0.25	+0.1
1,801,724	-		PGA1_c17250	0.26	-0.8
1,801,751	-		PGA1_c17250	0.28	+0.6
1,801,790	-		PGA1_c17250	0.32	-0.0
1,801,795	-		PGA1_c17250	0.33	-0.0
1,801,806	+		PGA1_c17250	0.34	+0.8
1,801,823	-		PGA1_c17250	0.36	-0.3
1,801,823	-		PGA1_c17250	0.36	-0.3
1,801,850	+		PGA1_c17250	0.38	+1.1
1,801,925	+		PGA1_c17250	0.46	+0.8
1,801,943	+		PGA1_c17250	0.48	-0.3
1,802,064	+		PGA1_c17250	0.60	+0.1
1,802,111	+		PGA1_c17250	0.64	-1.3