Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c16340

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
1,695,349	+		PGA1_c16320	0.71	+0.7
1,695,374	+		PGA1_c16320	0.73	-1.6
1,695,401	+		PGA1_c16320	0.75	+1.4
1,695,413	+		PGA1_c16320	0.76	+0.3
1,695,413	+		PGA1_c16320	0.76	+0.6
1,695,424	+		PGA1_c16320	0.77	+1.7
1,695,429	+		PGA1_c16320	0.77	+0.5
1,695,429	+		PGA1_c16320	0.77	+0.2
1,695,437	-		PGA1_c16320	0.77	+0.9
1,695,540	-		PGA1_c16320	0.84	+0.4
1,695,540	-		PGA1_c16320	0.84	+0.4
1,695,540	-		PGA1_c16320	0.84	-0.4
1,695,541	-		PGA1_c16320	0.84	-0.4
1,695,611	+		PGA1_c16320	0.89	+1.1
1,695,659	-				+0.7
1,695,668	+				+2.7
1,695,676	-				-0.1
1,695,676	-				+1.1
1,695,763	+				+2.7
1,695,818	+				-0.7
1,695,833	+				+0.1
1,695,833	+				-1.2
1,695,961	+				+2.4
1,696,233	-				-2.1
1,696,248	-				+1.8
1,696,311	+				-0.9
1,696,374	+				-2.8
1,696,407	-		PGA1_c16340	0.13	-0.3
1,696,489	-		PGA1_c16340	0.27	+0.1
1,696,520	-		PGA1_c16340	0.33	-1.5
1,696,665	-		PGA1_c16340	0.58	-0.5
1,696,679	-		PGA1_c16340	0.60	+0.1
1,696,679	-		PGA1_c16340	0.60	+1.1
1,696,838	+		PGA1_c16340	0.88	-1.7
1,696,849	+		PGA1_c16340	0.90	+1.7
1,696,900	-				-0.4
1,697,231	+		PGA1_c16350	0.68	-0.9
1,697,344	-				+2.1
1,697,415	+				-0.3
1,697,423	-				-2.0
1,697,423	-				-0.1
1,697,423	-				+0.7
1,697,423	-				+0.2
1,697,426	+				+0.9
1,697,594	+		PGA1_c16360	0.37	+0.1
1,697,604	+		PGA1_c16360	0.39	-0.7
1,697,605	+		PGA1_c16360	0.39	-0.2
1,697,697	-		PGA1_c16360	0.60	-0.9
1,697,764	-		PGA1_c16360	0.76	-0.7
1,697,787	+		PGA1_c16360	0.81	-2.1