Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c16140

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
1,672,474	-				-0.5
1,672,476	+				+1.1
1,672,502	+				+0.6
1,672,502	+				+1.4
1,672,502	+				+0.6
1,672,502	+				+0.1
1,672,510	-				-0.3
1,672,517	+				+1.3
1,672,549	-				-0.2
1,672,639	+				-1.9
1,672,647	-				-1.2
1,672,686	+				+0.5
1,672,686	+				-0.1
1,672,686	+				+1.5
1,672,686	+				+0.5
1,672,694	-		PGA1_c16130	0.11	-1.2
1,672,699	+		PGA1_c16130	0.11	+0.5
1,672,707	-		PGA1_c16130	0.12	+0.7
1,672,716	+		PGA1_c16130	0.14	+0.1
1,672,716	+		PGA1_c16130	0.14	+1.1
1,672,716	+		PGA1_c16130	0.14	-0.2
1,672,716	+		PGA1_c16130	0.14	-0.2
1,672,716	+		PGA1_c16130	0.14	-0.5
1,672,716	+		PGA1_c16130	0.14	-1.5
1,672,716	+		PGA1_c16130	0.14	-1.7
1,672,717	-		PGA1_c16130	0.14	+0.5
1,672,717	-		PGA1_c16130	0.14	-0.0
1,672,717	-		PGA1_c16130	0.14	-0.4
1,672,724	-		PGA1_c16130	0.15	+2.1
1,672,724	-		PGA1_c16130	0.15	-1.9
1,672,724	-		PGA1_c16130	0.15	-0.3
1,672,724	-		PGA1_c16130	0.15	-0.3
1,672,724	-		PGA1_c16130	0.15	-2.7
1,672,724	-		PGA1_c16130	0.15	-0.5
1,672,724	-		PGA1_c16130	0.15	-1.1
1,672,724	-		PGA1_c16130	0.15	-1.2
1,672,829	-		PGA1_c16130	0.30	-0.5
1,672,829	-		PGA1_c16130	0.30	-1.2
1,672,848	+		PGA1_c16130	0.32	-1.2
1,672,873	-		PGA1_c16130	0.36	-1.8
1,672,932	+		PGA1_c16130	0.44	+1.1
1,672,999	-		PGA1_c16130	0.53	-0.4
1,673,017	+		PGA1_c16130	0.56	+0.2
1,673,318	+				-0.9
1,673,323	+				-2.1
1,673,333	+				-1.5
1,673,426	+				-0.9
1,673,427	-				-0.6
1,673,562	+				+0.1
1,673,617	+		PGA1_c16140	0.12	+0.1
1,673,618	-		PGA1_c16140	0.12	-0.1
1,673,618	-		PGA1_c16140	0.12	+1.1
1,673,618	-		PGA1_c16140	0.12	+1.8
1,673,728	+		PGA1_c16140	0.16	-0.5
1,673,736	-		PGA1_c16140	0.17	+0.3
1,673,741	-		PGA1_c16140	0.17	-1.8
1,673,786	-		PGA1_c16140	0.19	-0.1
1,673,831	+		PGA1_c16140	0.21	-1.2
1,673,831	+		PGA1_c16140	0.21	-0.2
1,673,834	+		PGA1_c16140	0.21	+1.1
1,673,851	+		PGA1_c16140	0.21	+0.1
1,674,057	+		PGA1_c16140	0.30	+1.1
1,674,146	+		PGA1_c16140	0.33	+1.1
1,674,146	+		PGA1_c16140	0.33	+0.1
1,674,146	+		PGA1_c16140	0.33	-0.9
1,674,146	+		PGA1_c16140	0.33	-2.2
1,674,201	-		PGA1_c16140	0.36	-0.9
1,674,388	+		PGA1_c16140	0.43	+0.5
1,674,598	-		PGA1_c16140	0.52	-0.2
1,674,601	+		PGA1_c16140	0.52	-1.1
1,674,676	+		PGA1_c16140	0.55	+0.7
1,674,913	+		PGA1_c16140	0.65	-1.2
1,674,913	+		PGA1_c16140	0.65	+0.1
1,674,957	+		PGA1_c16140	0.66	+0.1
1,675,005	+		PGA1_c16140	0.68	-1.2
1,675,013	-		PGA1_c16140	0.69	+0.3
1,675,019	-		PGA1_c16140	0.69	+1.1
1,675,059	+		PGA1_c16140	0.70	+0.1
1,675,072	-		PGA1_c16140	0.71	+1.1
1,675,167	+		PGA1_c16140	0.75	-2.8
1,675,175	-		PGA1_c16140	0.75	+1.3
1,675,290	-		PGA1_c16140	0.80	+1.1
1,675,370	+		PGA1_c16140	0.83	-0.9
1,675,387	+		PGA1_c16140	0.84	-1.0
1,675,487	-		PGA1_c16140	0.88	+0.3
1,675,543	-				+1.1
1,675,572	+				+1.8
1,675,632	-				+0.1
1,675,692	+				+0.7
1,675,732	-				+0.5
1,675,758	+				-0.7
1,675,867	+				+1.9
1,675,875	-				+0.7
1,675,875	-				+1.7
1,675,907	-		PGA1_c16150	0.12	-0.5
1,675,913	+		PGA1_c16150	0.12	+1.7
1,675,997	-		PGA1_c16150	0.20	+1.1
1,676,025	-		PGA1_c16150	0.23	+0.6
1,676,066	+		PGA1_c16150	0.26	-0.9
1,676,105	-		PGA1_c16150	0.30	+1.3
1,676,110	+		PGA1_c16150	0.30	-1.4
1,676,118	-		PGA1_c16150	0.31	-0.5
1,676,137	-		PGA1_c16150	0.33	-1.2
1,676,267	+		PGA1_c16150	0.44	-0.9
1,676,267	+		PGA1_c16150	0.44	+1.8
1,676,288	+		PGA1_c16150	0.46	+0.3
1,676,309	-		PGA1_c16150	0.48	-0.8
1,676,319	+		PGA1_c16150	0.49	+0.7
1,676,362	+		PGA1_c16150	0.53	-0.9
1,676,453	-		PGA1_c16150	0.61	-1.5
1,676,462	+		PGA1_c16150	0.62	+0.1
1,676,591	-		PGA1_c16150	0.74	-0.8
1,676,672	-		PGA1_c16150	0.81	-1.5
1,676,778	-				+1.1