Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c15240

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
1,585,149	-		PGA1_c15230	0.27	-1.5
1,585,410	+		PGA1_c15230	0.48	-0.5
1,585,429	+		PGA1_c15230	0.50	-1.7
1,585,510	+		PGA1_c15230	0.57	+1.5
1,585,512	-		PGA1_c15230	0.57	-0.9
1,585,561	-		PGA1_c15230	0.61	-0.3
1,585,670	+		PGA1_c15230	0.70	-1.2
1,585,734	-		PGA1_c15230	0.75	-0.5
1,585,754	-		PGA1_c15230	0.77	+0.1
1,585,806	-		PGA1_c15230	0.81	-0.3
1,585,836	+		PGA1_c15230	0.83	-2.3
1,585,874	+		PGA1_c15230	0.87	-1.2
1,585,915	+				+0.1
1,585,975	+				+0.4
1,585,975	+				-1.7
1,585,983	-				-1.0
1,586,009	+				-3.0
1,586,009	+				-2.6
1,586,009	+				+0.3
1,586,009	+				+0.5
1,586,017	-				-0.2
1,586,017	-				+0.9
1,586,048	-				+0.9
1,586,075	+				-0.2
1,586,126	+				-0.2
1,586,144	+				-1.0
1,586,254	+				-1.5
1,586,260	+				-0.0
1,586,288	-				+1.7
1,586,402	+		PGA1_c15240	0.12	-1.3
1,586,402	+		PGA1_c15240	0.12	+0.0
1,586,518	+		PGA1_c15240	0.17	+0.5
1,586,528	+		PGA1_c15240	0.17	-1.7
1,586,723	+		PGA1_c15240	0.26	+0.1
1,586,736	-		PGA1_c15240	0.26	-1.3
1,586,782	+		PGA1_c15240	0.28	+0.5
1,586,782	+		PGA1_c15240	0.28	+0.1
1,586,790	-		PGA1_c15240	0.29	-1.3
1,586,803	+		PGA1_c15240	0.29	+0.1
1,586,833	+		PGA1_c15240	0.30	-1.0
1,586,833	+		PGA1_c15240	0.30	-1.1
1,586,833	+		PGA1_c15240	0.30	-2.0
1,586,833	+		PGA1_c15240	0.30	+0.7
1,586,841	-		PGA1_c15240	0.31	-0.8
1,586,841	-		PGA1_c15240	0.31	-2.5
1,586,841	-		PGA1_c15240	0.31	-1.1
1,586,870	+		PGA1_c15240	0.32	-0.6
1,586,870	+		PGA1_c15240	0.32	-0.5
1,586,878	-		PGA1_c15240	0.32	-0.9
1,586,903	-		PGA1_c15240	0.33	-1.0
1,586,948	+		PGA1_c15240	0.35	-0.3
1,586,963	+		PGA1_c15240	0.36	-1.3
1,587,006	-		PGA1_c15240	0.38	-2.8
1,587,100	-		PGA1_c15240	0.42	-1.8
1,587,115	-		PGA1_c15240	0.43	-0.4
1,587,137	-		PGA1_c15240	0.44	+1.1
1,587,202	+		PGA1_c15240	0.46	-3.5
1,587,202	+		PGA1_c15240	0.46	-1.5
1,587,328	+		PGA1_c15240	0.52	-1.1
1,587,400	-		PGA1_c15240	0.55	-0.4
1,587,484	-		PGA1_c15240	0.59	-1.2
1,587,549	+		PGA1_c15240	0.61	-1.1
1,587,554	+		PGA1_c15240	0.62	-1.2
1,587,591	+		PGA1_c15240	0.63	-0.0
1,587,599	-		PGA1_c15240	0.63	-1.9
1,587,609	+		PGA1_c15240	0.64	-2.5
1,587,609	+		PGA1_c15240	0.64	-2.5
1,587,617	-		PGA1_c15240	0.64	-1.7
1,587,656	+		PGA1_c15240	0.66	-0.3
1,587,779	-		PGA1_c15240	0.71	-0.4
1,587,884	+		PGA1_c15240	0.76	-2.9
1,587,884	+		PGA1_c15240	0.76	-0.2
1,587,905	-		PGA1_c15240	0.77	-0.6
1,587,912	-		PGA1_c15240	0.77	+0.4
1,587,941	+		PGA1_c15240	0.78	-1.3
1,587,949	-		PGA1_c15240	0.79	-1.9
1,587,986	+		PGA1_c15240	0.80	-0.7
1,588,012	+		PGA1_c15240	0.81	-2.3
1,588,153	+		PGA1_c15240	0.87	+0.5
1,588,153	+		PGA1_c15240	0.87	-1.0
1,588,153	+		PGA1_c15240	0.87	-0.9
1,588,163	-		PGA1_c15240	0.88	-1.2
1,588,200	+		PGA1_c15240	0.89	-1.0
1,588,208	-		PGA1_c15240	0.90	+0.2
1,588,265	-				-0.0
1,588,275	-				-1.1
1,588,395	-				-2.5
1,588,395	-				+0.8
1,588,422	-				-0.5
1,588,422	-				-1.2
1,588,446	-				+0.3
1,588,490	-				-0.9
1,588,503	-				+1.7
1,588,512	+				-1.0
1,588,512	+				-1.8
1,588,512	+				-0.5
1,588,525	-				-0.6
1,588,525	-				-1.5
1,588,525	-				-0.3
1,588,656	+		PGA1_c15250	0.25	-0.9
1,588,967	+		PGA1_c15250	0.77	-0.7
1,588,973	-		PGA1_c15250	0.78	-1.0
1,588,973	-		PGA1_c15250	0.78	-0.0
1,588,973	-		PGA1_c15250	0.78	-0.6
1,588,973	-		PGA1_c15250	0.78	-0.3
1,588,973	-		PGA1_c15250	0.78	+0.8
1,589,030	-		PGA1_c15250	0.88	-2.5
1,589,142	+				-1.6
1,589,152	+				-0.1
1,589,152	+				+0.1
1,589,152	+				+0.7
1,589,152	+				-1.8
1,589,152	+				-0.9
1,589,152	+				-1.2
1,589,152	+				-0.1
1,589,160	-				-0.2
1,589,160	-				-2.3
1,589,160	-				-0.5
1,589,160	-				+0.5
1,589,160	-				+0.3
1,589,161	-				-0.7
1,589,174	+				+1.5
1,589,179	+				+0.2
1,589,179	+				-2.8
1,589,182	-				-2.0
1,589,290	+				-2.5