Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c13940

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
1,440,789	+		PGA1_c13920	0.60	+0.6
1,440,840	+		PGA1_c13920	0.64	-2.0
1,440,840	+		PGA1_c13920	0.64	-0.7
1,440,886	+		PGA1_c13920	0.68	+1.0
1,440,904	-		PGA1_c13920	0.70	+2.3
1,440,948	+		PGA1_c13920	0.73	+1.2
1,440,948	+		PGA1_c13920	0.73	-0.2
1,440,948	+		PGA1_c13920	0.73	+1.2
1,440,948	+		PGA1_c13920	0.73	-0.7
1,440,956	-		PGA1_c13920	0.74	+0.9
1,440,956	-		PGA1_c13920	0.74	+0.7
1,440,956	-		PGA1_c13920	0.74	-0.6
1,440,956	-		PGA1_c13920	0.74	+0.2
1,440,956	-		PGA1_c13920	0.74	-0.8
1,440,956	-		PGA1_c13920	0.74	+0.2
1,440,956	-		PGA1_c13920	0.74	+1.4
1,441,041	+		PGA1_c13920	0.81	+1.0
1,441,055	+		PGA1_c13920	0.82	+1.3
1,441,226	-				-0.4
1,441,226	-				+0.2
1,441,233	-				+0.0
1,441,240	-				+0.2
1,441,257	+				+0.8
1,441,261	-				+0.5
1,441,284	-				-1.8
1,441,289	-				+0.6
1,441,292	+				-0.6
1,441,368	+		PGA1_c13930	0.19	+0.5
1,441,381	+		PGA1_c13930	0.22	-1.5
1,441,434	+		PGA1_c13930	0.34	+0.0
1,441,434	+		PGA1_c13930	0.34	-1.6
1,441,434	+		PGA1_c13930	0.34	+0.3
1,441,434	+		PGA1_c13930	0.34	-0.1
1,441,434	+		PGA1_c13930	0.34	-2.6
1,441,434	+		PGA1_c13930	0.34	-0.8
1,441,434	+		PGA1_c13930	0.34	-0.3
1,441,442	-		PGA1_c13930	0.36	-1.0
1,441,442	-		PGA1_c13930	0.36	+1.2
1,441,442	-		PGA1_c13930	0.36	+1.0
1,441,442	-		PGA1_c13930	0.36	+0.4
1,441,467	+		PGA1_c13930	0.41	+0.4
1,441,499	-		PGA1_c13930	0.49	+0.8
1,441,499	-		PGA1_c13930	0.49	-1.1
1,441,504	+		PGA1_c13930	0.50	+1.1
1,441,577	-		PGA1_c13930	0.66	-1.5
1,441,807	-				+0.2
1,441,807	-				+0.6
1,441,840	-				+0.2
1,441,948	+		PGA1_c13940	0.17	-0.4
1,441,953	+		PGA1_c13940	0.18	+0.7
1,441,956	-		PGA1_c13940	0.18	+0.2
1,441,999	+		PGA1_c13940	0.22	+1.6
1,441,999	+		PGA1_c13940	0.22	-0.2
1,441,999	+		PGA1_c13940	0.22	+0.5
1,442,149	+		PGA1_c13940	0.35	+1.4
1,442,157	-		PGA1_c13940	0.36	-0.0
1,442,167	-		PGA1_c13940	0.37	+0.7
1,442,178	-		PGA1_c13940	0.38	+1.6
1,442,314	-		PGA1_c13940	0.50	-0.4
1,442,352	-		PGA1_c13940	0.53	-0.8
1,442,383	+		PGA1_c13940	0.56	+0.3
1,442,411	+		PGA1_c13940	0.58	+1.7
1,442,435	+		PGA1_c13940	0.60	-0.0
1,442,437	+		PGA1_c13940	0.61	-0.8
1,442,485	+		PGA1_c13940	0.65	+0.8
1,442,560	+		PGA1_c13940	0.72	-0.4
1,442,568	-		PGA1_c13940	0.72	-0.7
1,442,568	-		PGA1_c13940	0.72	-1.4
1,442,568	-		PGA1_c13940	0.72	+0.7
1,442,824	+				+0.4
1,442,832	-				-0.3
1,442,876	+				+0.8
1,442,904	+				-0.5
1,442,925	-				-0.2
1,442,927	+				+0.2