Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c12720

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
1,317,756	-		PGA1_c12710	0.66	-1.5
1,317,876	-		PGA1_c12710	0.70	+0.1
1,317,881	+		PGA1_c12710	0.70	-0.8
1,317,944	-		PGA1_c12710	0.73	+0.7
1,318,151	+		PGA1_c12710	0.80	+0.9
1,318,328	+		PGA1_c12710	0.87	-0.7
1,318,328	+		PGA1_c12710	0.87	+0.2
1,318,328	+		PGA1_c12710	0.87	-1.7
1,318,328	+		PGA1_c12710	0.87	-0.7
1,318,328	+		PGA1_c12710	0.87	+0.5
1,318,331	-		PGA1_c12710	0.87	+1.6
1,318,333	+		PGA1_c12710	0.87	-0.9
1,318,336	-		PGA1_c12710	0.87	+1.5
1,318,336	-		PGA1_c12710	0.87	-0.9
1,318,348	+		PGA1_c12710	0.88	+0.2
1,318,389	-		PGA1_c12710	0.89	+1.5
1,318,549	+				+0.3
1,318,621	+				+0.3
1,318,628	-				-1.6
1,318,628	-				-0.6
1,318,628	-				-2.0
1,318,710	+				+0.1
1,318,710	+				-0.1
1,318,711	-				-0.7
1,318,720	+				-1.3
1,318,809	-				-1.5
1,318,833	+				-0.5
1,318,841	-				-0.9
1,318,862	+				-1.9
1,318,870	-				-0.9
1,318,870	-				-1.3
1,318,871	-				-2.6
1,318,878	-				-1.9
1,318,878	-				-2.6
1,318,878	-				+0.5
1,319,089	-		PGA1_c12720	0.24	-0.3
1,319,089	-		PGA1_c12720	0.24	+1.0
1,319,092	+		PGA1_c12720	0.24	-1.5
1,319,097	+		PGA1_c12720	0.25	+1.5
1,319,100	-		PGA1_c12720	0.25	-2.3
1,319,103	+		PGA1_c12720	0.25	-1.8
1,319,105	-		PGA1_c12720	0.25	+1.1
1,319,244	+		PGA1_c12720	0.35	-0.9
1,319,252	-		PGA1_c12720	0.36	-1.7
1,319,252	-		PGA1_c12720	0.36	-1.5
1,319,252	-		PGA1_c12720	0.36	-1.2
1,319,297	-		PGA1_c12720	0.39	+1.1
1,319,314	+		PGA1_c12720	0.40	-0.9
1,319,342	+		PGA1_c12720	0.42	-2.7
1,319,345	-		PGA1_c12720	0.43	-2.5
1,319,347	+		PGA1_c12720	0.43	-2.2
1,319,350	-		PGA1_c12720	0.43	-0.7
1,319,395	-		PGA1_c12720	0.46	-0.5
1,319,404	+		PGA1_c12720	0.47	-0.3
1,319,464	+		PGA1_c12720	0.51	-1.7
1,319,464	+		PGA1_c12720	0.51	-0.6
1,319,464	+		PGA1_c12720	0.51	-1.9
1,319,464	+		PGA1_c12720	0.51	-2.0
1,319,474	+		PGA1_c12720	0.52	-1.6
1,319,474	+		PGA1_c12720	0.52	-0.9
1,319,516	-		PGA1_c12720	0.55	-3.4
1,319,533	+		PGA1_c12720	0.56	+0.1
1,319,607	+		PGA1_c12720	0.62	+0.4
1,319,607	+		PGA1_c12720	0.62	-1.6
1,319,607	+		PGA1_c12720	0.62	-1.5
1,319,615	-		PGA1_c12720	0.62	-0.5
1,319,615	-		PGA1_c12720	0.62	+0.1
1,319,630	+		PGA1_c12720	0.63	+0.6
1,319,671	+		PGA1_c12720	0.66	-1.3
1,319,671	+		PGA1_c12720	0.66	-1.7
1,319,679	-		PGA1_c12720	0.67	-2.0
1,319,716	-		PGA1_c12720	0.69	-1.1
1,319,746	-		PGA1_c12720	0.72	-1.7
1,319,809	-		PGA1_c12720	0.76	-2.6
1,319,809	-		PGA1_c12720	0.76	-1.7
1,319,819	-		PGA1_c12720	0.77	-0.3
1,319,829	+		PGA1_c12720	0.78	-1.2
1,319,829	+		PGA1_c12720	0.78	-1.7
1,319,829	+		PGA1_c12720	0.78	-0.9
1,319,847	-		PGA1_c12720	0.79	-0.6
1,319,848	+		PGA1_c12720	0.79	-1.7
1,319,882	-		PGA1_c12720	0.81	-1.3
1,320,013	-				-2.3
1,320,020	-				-0.7
1,320,049	+				-0.8
1,320,049	+				-0.2
1,320,050	+				-0.3
1,320,109	-				+0.3
1,320,115	+				-1.7
1,320,123	-				+0.2
1,320,123	-				-1.2
1,320,127	+				-1.3
1,320,133	+				-0.3
1,320,214	+				-0.2
1,320,222	-				-0.9
1,320,274	+				-1.5
1,320,281	-				-0.4
1,320,315	+		PGA1_c12730	0.14	+0.4
1,320,423	+		PGA1_c12730	0.38	-2.0
1,320,441	-		PGA1_c12730	0.42	-2.8
1,320,736	+				+1.9
1,320,882	+		PGA1_c12740	0.39	-1.5
1,320,926	-		PGA1_c12740	0.49	+1.4
1,320,970	-		PGA1_c12740	0.59	+1.3
1,321,057	+		PGA1_c12740	0.79	-1.9
1,321,057	+		PGA1_c12740	0.79	-1.0
1,321,057	+		PGA1_c12740	0.79	-0.6
1,321,057	+		PGA1_c12740	0.79	+0.4
1,321,065	-		PGA1_c12740	0.81	-0.2
1,321,065	-		PGA1_c12740	0.81	+1.1
1,321,088	+		PGA1_c12740	0.86	+0.1
1,321,098	+		PGA1_c12740	0.89	-1.0