Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c01230

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
114,242	+		PGA1_c01220	0.21	-1.5
114,313	+		PGA1_c01220	0.29	-3.3
114,313	+		PGA1_c01220	0.29	+0.6
114,411	-		PGA1_c01220	0.40	+1.1
114,433	-		PGA1_c01220	0.43	-2.1
114,433	-		PGA1_c01220	0.43	-1.1
114,436	+		PGA1_c01220	0.43	-0.4
114,447	+		PGA1_c01220	0.45	-1.0
114,452	+		PGA1_c01220	0.45	+0.0
114,452	+		PGA1_c01220	0.45	+0.5
114,466	+		PGA1_c01220	0.47	-0.4
114,474	-		PGA1_c01220	0.48	+0.8
114,520	+		PGA1_c01220	0.53	-1.8
114,520	+		PGA1_c01220	0.53	-0.6
114,530	+		PGA1_c01220	0.54	+0.9
114,530	+		PGA1_c01220	0.54	-1.0
114,538	-		PGA1_c01220	0.55	+1.5
114,649	-		PGA1_c01220	0.68	+1.4
114,649	-		PGA1_c01220	0.68	+0.6
114,649	-		PGA1_c01220	0.68	-0.5
114,649	-		PGA1_c01220	0.68	-1.4
114,651	+		PGA1_c01220	0.68	-1.1
114,704	+		PGA1_c01220	0.74	-1.3
114,704	+		PGA1_c01220	0.74	+0.7
114,712	-		PGA1_c01220	0.75	+1.0
114,712	-		PGA1_c01220	0.75	+0.3
114,723	-		PGA1_c01220	0.76	+1.4
114,760	-		PGA1_c01220	0.80	-1.9
114,779	-		PGA1_c01220	0.82	+0.7
114,904	-				-0.2
114,904	-				+0.9
114,935	-				-1.0
114,969	-				-1.6
114,970	-				+0.7
114,985	+				+1.6
114,987	+				-1.1
114,987	+				+0.1
115,037	+				-2.1
115,045	+				-0.7
115,052	+				+0.2
115,053	-				+0.2
115,057	+				-2.1
115,060	-				+0.4
115,065	-				+0.6
115,070	-				+1.0
115,093	-				-0.5
115,097	+				-0.3
115,107	-				-0.9
115,118	-				-1.2
115,130	+				-0.5
115,130	+				-0.3
115,130	+				+0.8
115,137	+				+0.6
115,173	+		PGA1_c01230	0.10	-1.4
115,212	+		PGA1_c01230	0.15	-0.3
115,212	+		PGA1_c01230	0.15	-2.9
115,212	+		PGA1_c01230	0.15	-0.5
115,212	+		PGA1_c01230	0.15	-1.1
115,212	+		PGA1_c01230	0.15	-1.0
115,220	-		PGA1_c01230	0.16	-1.3
115,220	-		PGA1_c01230	0.16	+1.0
115,227	-		PGA1_c01230	0.17	-1.8
115,289	+		PGA1_c01230	0.24	-2.0
115,291	+		PGA1_c01230	0.25	-3.2
115,292	-		PGA1_c01230	0.25	-3.5
115,297	-		PGA1_c01230	0.25	-1.0
115,320	-		PGA1_c01230	0.28	-0.5
115,360	+		PGA1_c01230	0.33	-0.2
115,368	-		PGA1_c01230	0.34	+0.6
115,421	+		PGA1_c01230	0.41	-1.5
115,442	+		PGA1_c01230	0.43	-0.7
115,452	+		PGA1_c01230	0.44	+0.0
115,476	-		PGA1_c01230	0.47	-0.1
115,585	+		PGA1_c01230	0.60	-2.6
115,619	+		PGA1_c01230	0.65	-1.0
115,619	+		PGA1_c01230	0.65	-0.9
115,619	+		PGA1_c01230	0.65	-0.4
115,622	-		PGA1_c01230	0.65	-0.1
115,627	-		PGA1_c01230	0.66	-0.9
115,627	-		PGA1_c01230	0.66	-0.8
115,627	-		PGA1_c01230	0.66	+0.4
115,627	-		PGA1_c01230	0.66	-1.3
115,715	-		PGA1_c01230	0.76	-0.5
115,809	+		PGA1_c01230	0.88	-0.7
115,819	+		PGA1_c01230	0.89	-1.0
115,826	+		PGA1_c01230	0.90	-2.7
115,827	-				-2.5
115,836	+				+0.0
115,905	+				+0.3
115,905	+				+0.1
115,905	+				-0.8
115,910	+				-0.3
115,918	-				+0.3
116,007	-				+0.6