Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c10880

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
1,123,084	+		PGA1_c10860	0.79	-3.2
1,123,092	-		PGA1_c10860	0.80	-2.6
1,123,120	+		PGA1_c10860	0.84	+0.3
1,123,151	+		PGA1_c10860	0.88	-1.8
1,123,159	-		PGA1_c10860	0.89	-2.0
1,123,203	-				-2.6
1,123,233	-				-0.6
1,123,291	-				+1.0
1,123,318	-		PGA1_c10870	0.10	-1.1
1,123,325	+		PGA1_c10870	0.11	-2.0
1,123,333	-		PGA1_c10870	0.12	-3.3
1,123,333	-		PGA1_c10870	0.12	-0.1
1,123,333	-		PGA1_c10870	0.12	-0.2
1,123,336	+		PGA1_c10870	0.12	-1.0
1,123,370	+		PGA1_c10870	0.16	+1.0
1,123,415	+		PGA1_c10870	0.22	-1.2
1,123,423	-		PGA1_c10870	0.23	-1.0
1,123,435	+		PGA1_c10870	0.25	-0.6
1,123,443	-		PGA1_c10870	0.26	-1.1
1,123,588	+		PGA1_c10870	0.44	+1.1
1,123,622	-		PGA1_c10870	0.48	-2.1
1,123,631	+		PGA1_c10870	0.49	+0.2
1,123,692	+		PGA1_c10870	0.57	-2.2
1,123,778	-		PGA1_c10870	0.67	-0.6
1,123,805	+		PGA1_c10870	0.71	-0.6
1,123,825	+		PGA1_c10870	0.73	-1.2
1,123,906	-		PGA1_c10870	0.83	+0.6
1,123,936	+		PGA1_c10870	0.87	+0.8
1,123,943	-		PGA1_c10870	0.88	-0.3
1,124,042	+				-0.2
1,124,065	+				-2.2
1,124,130	+				+3.3
1,124,199	-		PGA1_c10880	0.16	+0.9
1,124,217	+		PGA1_c10880	0.18	-1.7
1,124,218	-		PGA1_c10880	0.18	-0.8
1,124,225	-		PGA1_c10880	0.18	+1.3
1,124,225	-		PGA1_c10880	0.18	-0.7
1,124,328	+		PGA1_c10880	0.28	-2.6
1,124,336	-		PGA1_c10880	0.29	+0.0
1,124,367	+		PGA1_c10880	0.32	-2.0
1,124,367	+		PGA1_c10880	0.32	-1.0
1,124,485	-		PGA1_c10880	0.43	-2.3
1,124,530	+		PGA1_c10880	0.48	-2.0
1,124,537	+		PGA1_c10880	0.48	+0.4
1,124,537	+		PGA1_c10880	0.48	-1.8
1,124,545	-		PGA1_c10880	0.49	-2.1
1,124,545	-		PGA1_c10880	0.49	-1.8
1,124,547	+		PGA1_c10880	0.49	-2.7
1,124,555	-		PGA1_c10880	0.50	+0.0
1,124,581	-		PGA1_c10880	0.53	-0.5
1,124,723	-		PGA1_c10880	0.66	-0.8
1,124,815	+		PGA1_c10880	0.75	-1.6
1,124,874	+		PGA1_c10880	0.81	-1.0
1,124,921	+		PGA1_c10880	0.85	-2.4
1,124,929	-		PGA1_c10880	0.86	-1.5
1,124,939	-		PGA1_c10880	0.87	-2.5
1,124,972	+				-1.6
1,124,972	+				-0.9
1,125,018	+				+0.4
1,125,025	+				+0.3
1,125,078	+				+0.0
1,125,078	+				-1.0
1,125,078	+				+0.7
1,125,078	+				-2.6
1,125,078	+				+1.2
1,125,086	-				-1.0
1,125,086	-				-2.3
1,125,086	-				+1.4
1,125,086	-				+0.5
1,125,101	+				-0.6
1,125,101	+				-1.4
1,125,109	-				+0.7
1,125,109	-				-0.3
1,125,249	+				-1.0
1,125,257	+				-1.7
1,125,257	+				+0.6
1,125,257	+				-1.2
1,125,257	+				-0.4
1,125,257	+				-0.6
1,125,257	+				+0.6
1,125,257	+				-1.3
1,125,257	-				+0.6
1,125,257	-				-0.5
1,125,257	-				+1.4
1,125,265	-				+1.0
1,125,265	-				-0.4
1,125,265	-				-0.2
1,125,265	-				+0.1
1,125,265	-				+1.0
1,125,265	-				-0.4
1,125,265	-				+0.7
1,125,265	-				+3.3
1,125,277	-				+0.5
1,125,277	-				+0.5
1,125,330	+				-1.6
1,125,330	+				-1.0