Strain Fitness in Shewanella amazonensis SB2B around Sama_2185

Experiment: Cytidine

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cytidine
2,642,217	+				-1.4
2,642,223	-				+0.3
2,642,230	+				-0.7
2,642,230	+				+0.2
2,642,230	+				+0.1
2,642,236	+				-1.7
2,642,236	+				-0.3
2,642,236	+				-0.1
2,642,236	+				-1.6
2,642,236	+				+0.5
2,642,236	+				-0.4
2,642,237	-				+1.0
2,642,237	-				+0.9
2,642,279	+				-0.6
2,642,318	-		Sama_2184	0.14	+1.7
2,642,404	+		Sama_2184	0.36	-0.4
2,642,404	+		Sama_2184	0.36	+0.0
2,642,404	+		Sama_2184	0.36	-0.4
2,642,405	-		Sama_2184	0.36	+0.3
2,642,405	-		Sama_2184	0.36	+0.1
2,642,405	-		Sama_2184	0.36	+0.3
2,642,408	+		Sama_2184	0.37	-0.4
2,642,435	+		Sama_2184	0.44	-1.1
2,642,453	+		Sama_2184	0.48	+0.0
2,642,454	-		Sama_2184	0.48	-0.2
2,642,460	+		Sama_2184	0.50	+0.0
2,642,461	-		Sama_2184	0.50	-0.3
2,642,461	-		Sama_2184	0.50	-0.3
2,642,523	+		Sama_2184	0.66	-0.3
2,642,524	-		Sama_2184	0.66	-1.7
2,642,551	+		Sama_2184	0.73	-1.3
2,642,551	+		Sama_2184	0.73	-0.8
2,642,607	+		Sama_2184	0.88	+0.5
2,642,695	+				-0.4
2,642,844	+				-0.4
2,642,990	+				+0.1
2,642,991	-				+2.4
2,643,188	+				-0.7
2,643,188	+				+1.5
2,643,226	+				-0.6
2,643,272	+				+0.2
2,643,321	+				+0.6
2,643,325	+				-0.7
2,643,325	+				-0.6
2,643,325	+				-0.1
2,643,325	+				+0.0
2,643,326	-				+0.3
2,643,326	-				+0.7
2,643,329	+				+0.3
2,643,330	-				+0.1
2,643,360	+				-0.0
2,643,394	-				+0.9
2,643,394	-				-0.8
2,643,394	-				-2.2
2,643,659	+		Sama_2185	0.19	-0.3
2,643,659	+		Sama_2185	0.19	-0.0
2,643,659	+		Sama_2185	0.19	+0.0
2,643,659	+		Sama_2185	0.19	-1.1
2,643,659	+		Sama_2185	0.19	+0.9
2,643,660	-		Sama_2185	0.20	-1.3
2,643,676	-		Sama_2185	0.20	+1.9
2,643,676	-		Sama_2185	0.20	-0.4
2,643,784	+		Sama_2185	0.25	+0.4
2,643,784	+		Sama_2185	0.25	-0.7
2,643,784	+		Sama_2185	0.25	-1.2
2,643,785	-		Sama_2185	0.25	-0.9
2,643,785	-		Sama_2185	0.25	+1.0
2,643,785	-		Sama_2185	0.25	+0.1
2,643,785	-		Sama_2185	0.25	-1.0
2,643,854	+		Sama_2185	0.28	-1.2
2,643,861	-		Sama_2185	0.28	+0.0
2,643,956	+		Sama_2185	0.32	+0.2
2,643,957	-		Sama_2185	0.32	-1.2
2,643,957	-		Sama_2185	0.32	+0.1
2,643,957	-		Sama_2185	0.32	+0.0
2,643,957	-		Sama_2185	0.32	+0.1
2,643,983	+		Sama_2185	0.33	-0.4
2,643,983	+		Sama_2185	0.33	+0.9
2,643,984	-		Sama_2185	0.33	+1.3
2,644,014	+		Sama_2185	0.34	-0.1
2,644,015	-		Sama_2185	0.34	-0.3
2,644,015	-		Sama_2185	0.34	+0.3
2,644,061	+		Sama_2185	0.36	+0.2
2,644,062	-		Sama_2185	0.36	+1.3
2,644,062	-		Sama_2185	0.36	+2.1
2,644,075	-		Sama_2185	0.37	-0.9
2,644,086	+		Sama_2185	0.37	+0.1
2,644,087	-		Sama_2185	0.37	+0.6
2,644,087	-		Sama_2185	0.37	-1.1
2,644,087	-		Sama_2185	0.37	-1.3
2,644,091	+		Sama_2185	0.37	+0.3
2,644,100	-		Sama_2185	0.38	+0.2
2,644,115	-		Sama_2185	0.38	-0.8
2,644,251	+		Sama_2185	0.44	-0.3
2,644,252	-		Sama_2185	0.44	+0.4
2,644,270	+		Sama_2185	0.45	+0.6
2,644,270	+		Sama_2185	0.45	+1.0
2,644,288	+		Sama_2185	0.46	+0.4
2,644,306	-		Sama_2185	0.46	-0.0
2,644,306	-		Sama_2185	0.46	-0.1
2,644,306	-		Sama_2185	0.46	+0.3
2,644,306	-		Sama_2185	0.46	+1.2
2,644,376	+		Sama_2185	0.49	-1.4
2,644,376	+		Sama_2185	0.49	+1.0
2,644,376	+		Sama_2185	0.49	-0.0
2,644,616	+		Sama_2185	0.59	+1.1
2,644,616	+		Sama_2185	0.59	-1.3
2,644,616	+		Sama_2185	0.59	+0.1
2,644,617	-		Sama_2185	0.59	+0.8
2,644,617	-		Sama_2185	0.59	-0.9
2,644,617	-		Sama_2185	0.59	-0.4
2,644,617	-		Sama_2185	0.59	-0.2
2,644,659	+		Sama_2185	0.61	+0.3
2,644,659	+		Sama_2185	0.61	+0.3
2,644,666	-		Sama_2185	0.61	-0.8
2,644,666	-		Sama_2185	0.61	-0.8
2,644,668	+		Sama_2185	0.61	-0.6
2,644,668	+		Sama_2185	0.61	-2.0
2,644,669	-		Sama_2185	0.61	-0.7
2,644,669	-		Sama_2185	0.61	+0.3
2,644,676	+		Sama_2185	0.62	-0.4
2,644,676	+		Sama_2185	0.62	+0.3
2,644,676	+		Sama_2185	0.62	-0.0
2,644,676	+		Sama_2185	0.62	+0.6
2,644,677	-		Sama_2185	0.62	-0.1
2,644,677	-		Sama_2185	0.62	+1.0
2,644,677	-		Sama_2185	0.62	-0.4
2,644,677	-		Sama_2185	0.62	-1.0
2,644,728	+		Sama_2185	0.64	-0.4
2,644,728	+		Sama_2185	0.64	+1.5
2,644,728	+		Sama_2185	0.64	-0.8
2,644,729	-		Sama_2185	0.64	+0.1
2,644,742	+		Sama_2185	0.64	-0.8
2,644,795	+		Sama_2185	0.67	+0.3
2,644,795	+		Sama_2185	0.67	+0.5
2,644,795	+		Sama_2185	0.67	-0.1
2,644,795	+		Sama_2185	0.67	+1.3
2,644,796	-		Sama_2185	0.67	+1.3
2,644,821	+		Sama_2185	0.68	+0.2
2,644,854	+		Sama_2185	0.69	+0.1
2,644,854	+		Sama_2185	0.69	+0.3
2,644,854	+		Sama_2185	0.69	+1.1
2,645,061	+		Sama_2185	0.78	+1.2
2,645,062	-		Sama_2185	0.78	+0.8
2,645,062	-		Sama_2185	0.78	-0.7
2,645,088	+		Sama_2185	0.79	+0.6
2,645,088	+		Sama_2185	0.79	+0.0
2,645,088	+		Sama_2185	0.79	+0.1
2,645,088	+		Sama_2185	0.79	+0.4
2,645,089	-		Sama_2185	0.79	-1.3
2,645,089	-		Sama_2185	0.79	-1.7
2,645,089	-		Sama_2185	0.79	+0.0
2,645,154	-		Sama_2185	0.81	-0.2
2,645,157	+		Sama_2185	0.82	+0.4
2,645,157	+		Sama_2185	0.82	-0.7
2,645,157	+		Sama_2185	0.82	-0.1
2,645,157	+		Sama_2185	0.82	+0.4
2,645,157	+		Sama_2185	0.82	-0.3
2,645,157	+		Sama_2185	0.82	-0.9
2,645,157	+		Sama_2185	0.82	-0.2
2,645,157	+		Sama_2185	0.82	-1.7
2,645,157	+		Sama_2185	0.82	-0.3
2,645,157	+		Sama_2185	0.82	-1.0
2,645,158	-		Sama_2185	0.82	-0.0
2,645,158	-		Sama_2185	0.82	-0.3
2,645,158	-		Sama_2185	0.82	-0.7
2,645,158	-		Sama_2185	0.82	-0.6
2,645,158	-		Sama_2185	0.82	-1.0
2,645,158	-		Sama_2185	0.82	-0.1
2,645,160	+		Sama_2185	0.82	-0.1
2,645,160	+		Sama_2185	0.82	+0.8
2,645,160	+		Sama_2185	0.82	+0.5
2,645,161	-		Sama_2185	0.82	+0.5
2,645,161	-		Sama_2185	0.82	-0.7
2,645,161	-		Sama_2185	0.82	+0.1
2,645,161	-		Sama_2185	0.82	-0.0
2,645,161	-		Sama_2185	0.82	-0.7
2,645,161	-		Sama_2185	0.82	+0.6
2,645,161	-		Sama_2185	0.82	-2.7
2,645,161	-		Sama_2185	0.82	+2.3
2,645,171	-		Sama_2185	0.82	+0.7
2,645,214	+		Sama_2185	0.84	-0.6
2,645,214	+		Sama_2185	0.84	-0.1
2,645,214	+		Sama_2185	0.84	+0.4
2,645,214	+		Sama_2185	0.84	-0.1
2,645,266	-		Sama_2185	0.86	+0.2
2,645,280	-		Sama_2185	0.87	-0.7
2,645,280	-		Sama_2185	0.87	+0.3
2,645,280	-		Sama_2185	0.87	+0.2
2,645,283	+		Sama_2185	0.87	-0.6
2,645,283	+		Sama_2185	0.87	+0.1
2,645,284	-		Sama_2185	0.87	-0.2
2,645,284	-		Sama_2185	0.87	-0.2
2,645,332	+		Sama_2185	0.89	-1.0
2,645,332	+		Sama_2185	0.89	-0.2
2,645,332	+		Sama_2185	0.89	-0.1
2,645,332	+		Sama_2185	0.89	-1.6
2,645,333	-		Sama_2185	0.89	+0.3
2,645,380	+				-0.1
2,645,380	+				+0.6
2,645,380	+				-0.4
2,645,380	+				-1.6
2,645,380	+				+0.3
2,645,380	+				-0.1
2,645,380	+				-1.1
2,645,380	+				-1.1
2,645,381	-				+0.8
2,645,388	+				+0.0
2,645,388	+				-0.3
2,645,388	+				-0.6
2,645,388	+				+0.3
2,645,388	+				+0.1
2,645,388	+				+0.8
2,645,388	+				+2.1
2,645,389	-				-0.3
2,645,389	-				+0.6
2,645,389	-				-0.3
2,645,389	-				+0.3
2,645,389	-				+1.5
2,645,414	+				+0.2
2,645,414	+				+0.7
2,645,415	-				+0.5
2,645,435	-				+1.9
2,645,487	+				+0.0
2,645,487	+				+0.7
2,645,487	+				-0.7
2,645,487	+				+0.4
2,645,488	-				-0.6
2,645,488	-				+0.3
2,645,488	-				+1.0
2,645,488	-				-1.4
2,645,488	-				-0.9
2,645,522	+				-0.1
2,645,523	-				+0.3
2,645,568	+				-0.3
2,645,568	+				+0.6
2,645,569	-				+0.1
2,645,569	-				+0.3
2,645,569	-				-0.1
2,645,598	+				-0.2
2,645,643	-				-1.0
2,645,653	+				+0.2
2,645,668	+				+2.3
2,645,669	-				-0.0
2,645,669	-				+1.7
2,645,679	+				-1.0
2,645,680	-				-0.7
2,645,680	-				-0.2
2,645,684	+				+0.5
2,645,685	-				+0.8
2,645,685	-				-0.8
2,645,718	+				-1.2
2,645,719	-				+2.6
2,645,751	+				+2.6
2,645,766	-				-1.0
2,645,903	-		Sama_2186	0.34	-1.1
2,645,981	+		Sama_2186	0.49	-0.0
2,646,024	+		Sama_2186	0.57	+0.9
2,646,024	+		Sama_2186	0.57	-1.4
2,646,071	-		Sama_2186	0.66	-0.3
2,646,071	-		Sama_2186	0.66	+0.6
2,646,071	-		Sama_2186	0.66	-1.7
2,646,091	+		Sama_2186	0.69	-0.6
2,646,108	+		Sama_2186	0.72	-0.7
2,646,108	+		Sama_2186	0.72	+3.0
2,646,108	+		Sama_2186	0.72	+0.6
2,646,108	+		Sama_2186	0.72	-0.5
2,646,109	-		Sama_2186	0.73	-0.1
2,646,109	-		Sama_2186	0.73	+0.5
2,646,109	-		Sama_2186	0.73	-0.9
2,646,332	+				-1.7
2,646,351	+				-2.7
2,646,352	-				-3.2
2,646,353	+				-2.2
2,646,354	-				+0.0
2,646,368	-		Sama_2187	0.10	-2.3
2,646,479	-		Sama_2187	0.22	-2.7
2,646,479	-		Sama_2187	0.22	-3.5
2,646,479	-		Sama_2187	0.22	-4.4
2,646,482	-		Sama_2187	0.23	-4.4
2,646,482	-		Sama_2187	0.23	-1.7
2,646,482	-		Sama_2187	0.23	-2.0
2,646,535	+		Sama_2187	0.29	-3.5
2,646,535	+		Sama_2187	0.29	-2.5
2,646,536	-		Sama_2187	0.29	-1.7
2,646,536	-		Sama_2187	0.29	-3.3