Strain Fitness in Shewanella oneidensis MR-1 around SO3978

Experiment: Bacitracin 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bacitracin 0.25 mg/ml
4,113,704	+				+0.1
4,113,704	+				+0.1
4,113,808	+		SO3976	0.23	+0.6
4,113,816	+		SO3976	0.24	-1.4
4,113,826	+		SO3976	0.25	-0.8
4,113,904	+		SO3976	0.35	-0.0
4,113,918	+		SO3976	0.37	-0.2
4,113,918	+		SO3976	0.37	-0.1
4,113,918	+		SO3976	0.37	-0.5
4,113,934	+		SO3976	0.39	+0.8
4,113,937	-		SO3976	0.39	-0.1
4,113,947	-		SO3976	0.41	-0.3
4,113,947	-		SO3976	0.41	+1.0
4,114,067	-		SO3976	0.56	+0.5
4,114,182	-		SO3976	0.71	-0.3
4,114,187	-		SO3976	0.72	+0.1
4,114,229	+		SO3976	0.77	+0.5
4,114,280	+		SO3976	0.83	+0.0
4,114,585	+				-0.2
4,114,594	+				-2.0
4,114,595	+				-0.6
4,114,611	+				-0.5
4,114,694	-				+0.2
4,114,694	-				+0.4
4,114,694	-				-0.7
4,114,751	-		SO3978	0.12	+0.1
4,114,822	-		SO3978	0.20	-0.6
4,114,834	+		SO3978	0.21	-0.2
4,114,843	+		SO3978	0.22	+0.1
4,114,940	-		SO3978	0.32	-2.9
4,114,995	-		SO3978	0.38	-1.3
4,115,064	+		SO3978	0.46	-0.1
4,115,128	-		SO3978	0.53	-1.2
4,115,165	+		SO3978	0.57	-0.5
4,115,301	-		SO3978	0.72	-0.0
4,115,317	+		SO3978	0.73	-1.1
4,115,344	-		SO3978	0.76	-0.2
4,115,345	-		SO3978	0.76	-1.4
4,115,482	+				-2.2
4,115,490	-				-0.5
4,115,490	-				-0.3
4,115,840	+				+0.0
4,115,852	+				-0.5
4,115,939	-		SO3979	0.31	-0.1
4,115,939	-		SO3979	0.31	+0.5
4,115,967	+		SO3979	0.50	-0.0
4,115,974	-		SO3979	0.55	+1.5
4,116,000	-		SO3979	0.73	+0.1
4,116,000	-		SO3979	0.73	+0.3
4,116,072	-				+0.5
4,116,180	+				-0.1
4,116,187	-				+0.5
4,116,188	-				-1.4
4,116,207	+				-2.1
4,116,316	+				+0.3
4,116,441	+		SO3980	0.17	-0.8
4,116,512	-		SO3980	0.22	-0.3