Strain Fitness in Shewanella oneidensis MR-1 around SO2912

Experiment: Bacitracin 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bacitracin 0.25 mg/ml
3,041,181	-				-0.2
3,041,181	-				-1.0
3,041,189	+				-0.6
3,041,197	+				-0.5
3,041,287	-				+0.5
3,041,294	+				+0.6
3,041,302	-				-0.1
3,041,302	-				-0.1
3,041,543	-				+0.3
3,041,545	-				-0.2
3,041,563	-				+0.0
3,041,601	-				-0.8
3,041,640	-				+0.4
3,041,670	+				-0.5
3,041,670	+				-0.0
3,041,678	-				+0.2
3,041,721	-				-0.4
3,041,753	-				-0.2
3,041,960	-				-0.8
3,041,976	+				-0.4
3,042,009	+				-0.7
3,042,015	-				-0.4
3,042,077	-				+0.0
3,042,116	-				+1.2
3,042,116	-				-0.0
3,042,209	-				-0.1
3,042,209	-				-1.3
3,042,275	-				-0.3
3,042,321	-				+0.5
3,042,431	-	pflB	SO2912	0.12	+0.1
3,042,474	-	pflB	SO2912	0.14	-0.2
3,042,497	-	pflB	SO2912	0.15	+0.6
3,042,524	-	pflB	SO2912	0.16	+1.5
3,042,574	+	pflB	SO2912	0.18	+0.3
3,042,675	+	pflB	SO2912	0.22	+0.3
3,042,761	+	pflB	SO2912	0.26	+0.1
3,042,790	-	pflB	SO2912	0.28	-0.5
3,042,845	-	pflB	SO2912	0.30	-0.7
3,042,942	-	pflB	SO2912	0.34	+0.3
3,043,054	-	pflB	SO2912	0.39	+0.3
3,043,206	-	pflB	SO2912	0.46	+0.6
3,043,244	+	pflB	SO2912	0.47	+0.0
3,043,338	+	pflB	SO2912	0.52	+0.3
3,043,348	+	pflB	SO2912	0.52	+0.6
3,043,348	+	pflB	SO2912	0.52	+0.4
3,043,356	-	pflB	SO2912	0.52	+0.0
3,043,561	-	pflB	SO2912	0.61	-0.2
3,043,577	-	pflB	SO2912	0.62	+0.4
3,043,606	+	pflB	SO2912	0.63	-0.4
3,043,701	+	pflB	SO2912	0.67	+1.1
3,043,731	-	pflB	SO2912	0.69	-0.5
3,043,793	+	pflB	SO2912	0.71	-1.3
3,043,793	+	pflB	SO2912	0.71	+0.1
3,043,987	+	pflB	SO2912	0.80	-0.0
3,044,012	+	pflB	SO2912	0.81	-0.8
3,044,118	-	pflB	SO2912	0.86	-1.8
3,044,126	+	pflB	SO2912	0.86	+0.0
3,044,162	-	pflB	SO2912	0.88	+0.0
3,044,201	-	pflB	SO2912	0.89	-1.2
3,044,218	-				+0.7
3,044,223	+				+0.0
3,044,234	-				+0.2
3,044,392	+				-0.7
3,044,392	+				+0.2
3,044,400	-				-2.1
3,044,400	-				-0.3
3,044,525	+				-1.1
3,044,525	+				+1.5
3,044,525	+				+1.1
3,044,533	-				-0.0
3,044,533	-				+0.1
3,044,624	-	pflA	SO2913	0.16	+0.3
3,044,893	-	pflA	SO2913	0.52	+0.3
3,044,941	-	pflA	SO2913	0.58	-0.7
3,044,948	+	pflA	SO2913	0.59	-0.2
3,045,006	-	pflA	SO2913	0.67	-0.7
3,045,048	+	pflA	SO2913	0.73	-0.3
3,045,048	+	pflA	SO2913	0.73	-0.1
3,045,049	-	pflA	SO2913	0.73	+0.5
3,045,177	+				-0.8
3,045,185	-				-0.1
3,045,229	+				-0.1
3,045,394	+				-0.6
3,045,424	+		SO2914	0.29	+0.1