Strain Fitness in Shewanella oneidensis MR-1 around SO1114

Experiment: Bacitracin 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bacitracin 0.25 mg/ml
1,156,177	+		SO1112.1	0.78	+0.3
1,156,177	+		SO1112.1	0.78	+0.4
1,156,222	+		SO1112.1	0.81	-0.2
1,156,286	+		SO1112.1	0.85	-0.1
1,156,326	-		SO1112.1	0.88	-0.1
1,156,408	-				+0.7
1,156,426	+				+0.5
1,156,485	-				-0.8
1,156,490	+				+0.1
1,156,503	+				-0.3
1,156,600	-		SO_1113	0.18	-1.3
1,156,604	+		SO_1113	0.19	-0.3
1,156,683	-		SO_1113	0.36	-0.9
1,156,717	-		SO_1113	0.43	-0.1
1,156,743	+		SO_1113	0.49	+0.5
1,156,910	+		SO_1113	0.84	+2.1
1,157,059	+				-0.4
1,157,141	-				+0.2
1,157,293	-	dinP	SO1114	0.13	-0.0
1,157,311	+	dinP	SO1114	0.14	-0.4
1,157,321	+	dinP	SO1114	0.15	-0.3
1,157,443	-	dinP	SO1114	0.27	-0.5
1,157,443	-	dinP	SO1114	0.27	-0.3
1,157,443	-	dinP	SO1114	0.27	+0.1
1,157,489	+	dinP	SO1114	0.31	-0.4
1,157,615	-	dinP	SO1114	0.43	-1.5
1,157,638	-	dinP	SO1114	0.45	-0.9
1,157,712	-	dinP	SO1114	0.52	-0.3
1,157,736	-	dinP	SO1114	0.54	-1.7
1,157,826	-	dinP	SO1114	0.62	+0.1
1,157,831	+	dinP	SO1114	0.63	+0.0
1,157,840	-	dinP	SO1114	0.64	+0.0
1,157,841	-	dinP	SO1114	0.64	+0.3
1,157,908	-	dinP	SO1114	0.70	-1.0
1,157,919	-	dinP	SO1114	0.71	-1.1
1,158,024	+	dinP	SO1114	0.81	+0.2
1,158,053	+	dinP	SO1114	0.83	+1.5
1,158,068	+	dinP	SO1114	0.85	-0.9
1,158,090	-	dinP	SO1114	0.87	-0.2
1,158,119	-	dinP	SO1114	0.89	-0.8
1,158,157	+				+0.2
1,158,158	+				+0.7
1,158,193	+				-0.2
1,158,314	+				-0.2
1,158,314	+				-0.4
1,158,315	-				+0.1
1,158,322	-				+0.3
1,158,322	-				+0.6
1,158,322	-				+0.0
1,158,322	-				+0.6
1,158,322	-				-1.0
1,158,324	+				+0.0
1,158,332	-				-1.1
1,158,376	-				-0.7
1,158,378	-				-0.3
1,158,415	-				-0.5
1,158,495	-	pepD	SO1115	0.11	-0.1
1,158,497	-	pepD	SO1115	0.12	+0.6
1,158,532	-	pepD	SO1115	0.14	-0.4
1,158,547	-	pepD	SO1115	0.15	-0.3
1,158,609	+	pepD	SO1115	0.19	+0.0
1,158,740	+	pepD	SO1115	0.28	+0.0
1,158,748	-	pepD	SO1115	0.29	-0.3
1,158,887	-	pepD	SO1115	0.38	-0.7
1,158,891	+	pepD	SO1115	0.39	-0.7
1,159,018	+	pepD	SO1115	0.47	-0.8
1,159,066	-	pepD	SO1115	0.51	-0.4
1,159,191	-	pepD	SO1115	0.59	-0.8
1,159,210	+	pepD	SO1115	0.60	+0.2
1,159,210	+	pepD	SO1115	0.60	-0.1
1,159,210	+	pepD	SO1115	0.60	+0.4
1,159,210	+	pepD	SO1115	0.60	-2.3
1,159,218	-	pepD	SO1115	0.61	+0.2