Experiment: Bacitracin 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SO0661 and SO0662 overlap by 4 nucleotides SO0662 and SO0663 overlap by 1 nucleotides SO0663 and SO0664 are separated by 2 nucleotides SO0664 and SO0665 overlap by 11 nucleotides SO0665 and SO0666 overlap by 1 nucleotides
SO0661: SO0661 - zinc finger-related protein (NCBI ptt file), at 681,856 to 682,068
SO0661
SO0662: SO0662 - conserved hypothetical protein (NCBI ptt file), at 682,065 to 682,412
SO0662
SO0663: SO0663 - conserved hypothetical protein (NCBI ptt file), at 682,412 to 682,708
SO0663
SO0664: SO0664 - hypothetical protein (NCBI ptt file), at 682,711 to 682,983
SO0664
SO0665: SO0665 - conserved hypothetical protein (NCBI ptt file), at 682,973 to 683,539
SO0665
SO0666: SO0666 - prophage MuSo1, portal protein, putative (NCBI ptt file), at 683,539 to 685,179
SO0666
Position (kb) 682
683
684 Strain fitness (log2 ratio) -2
-1
0
1
2 at 681.973 kb on - strand, within SO0661 at 682.050 kb on - strand at 682.154 kb on + strand, within SO0662 at 682.302 kb on + strand, within SO0662 at 682.405 kb on - strand at 682.505 kb on - strand, within SO0663 at 682.655 kb on + strand, within SO0663 at 682.800 kb on + strand, within SO0664 at 682.838 kb on - strand, within SO0664 at 682.865 kb on - strand, within SO0664 at 682.890 kb on + strand, within SO0664 at 683.003 kb on + strand at 683.044 kb on - strand, within SO0665 at 683.148 kb on - strand, within SO0665 at 683.173 kb on + strand, within SO0665 at 683.181 kb on - strand, within SO0665 at 683.237 kb on - strand, within SO0665 at 683.242 kb on - strand, within SO0665 at 683.340 kb on + strand, within SO0665 at 683.348 kb on - strand, within SO0665 at 683.358 kb on - strand, within SO0665 at 683.426 kb on + strand, within SO0665 at 683.483 kb on + strand at 683.491 kb on - strand at 683.491 kb on - strand at 683.491 kb on - strand at 683.737 kb on + strand, within SO0666 at 683.770 kb on - strand, within SO0666 at 683.794 kb on - strand, within SO0666 at 683.947 kb on + strand, within SO0666 at 683.947 kb on + strand, within SO0666 at 683.954 kb on - strand, within SO0666 at 683.955 kb on - strand, within SO0666 at 683.955 kb on - strand, within SO0666 at 683.955 kb on - strand, within SO0666 at 684.067 kb on + strand, within SO0666 at 684.067 kb on + strand, within SO0666 at 684.081 kb on + strand, within SO0666 at 684.089 kb on - strand, within SO0666 at 684.113 kb on + strand, within SO0666 at 684.121 kb on - strand, within SO0666 at 684.199 kb on + strand, within SO0666 at 684.234 kb on - strand, within SO0666 at 684.277 kb on + strand, within SO0666 at 684.293 kb on - strand, within SO0666 at 684.321 kb on + strand, within SO0666 at 684.321 kb on + strand, within SO0666 at 684.321 kb on + strand, within SO0666 at 684.321 kb on + strand, within SO0666 at 684.396 kb on + strand, within SO0666 at 684.431 kb on + strand, within SO0666 at 684.439 kb on - strand, within SO0666 at 684.439 kb on - strand, within SO0666 at 684.439 kb on - strand, within SO0666 at 684.439 kb on - strand, within SO0666 at 684.454 kb on - strand, within SO0666 at 684.461 kb on - strand, within SO0666 at 684.498 kb on + strand, within SO0666 at 684.506 kb on - strand, within SO0666 at 684.506 kb on - strand, within SO0666 at 684.516 kb on - strand, within SO0666
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 0.25 mg/ml remove 681,973 - SO0661 0.55 -0.5 682,050 - +0.6 682,154 + SO0662 0.26 -0.3 682,302 + SO0662 0.68 -0.1 682,405 - -0.5 682,505 - SO0663 0.31 +0.1 682,655 + SO0663 0.82 -0.2 682,800 + SO0664 0.33 +0.5 682,838 - SO0664 0.47 +0.3 682,865 - SO0664 0.56 -0.1 682,890 + SO0664 0.66 -0.2 683,003 + -1.1 683,044 - SO0665 0.13 +1.0 683,148 - SO0665 0.31 +0.9 683,173 + SO0665 0.35 +1.1 683,181 - SO0665 0.37 -0.2 683,237 - SO0665 0.47 +0.1 683,242 - SO0665 0.47 +0.5 683,340 + SO0665 0.65 -0.6 683,348 - SO0665 0.66 +0.8 683,358 - SO0665 0.68 -0.0 683,426 + SO0665 0.80 +0.5 683,483 + -0.3 683,491 - +0.5 683,491 - -0.1 683,491 - -0.7 683,737 + SO0666 0.12 -0.9 683,770 - SO0666 0.14 +0.4 683,794 - SO0666 0.16 -0.6 683,947 + SO0666 0.25 -0.4 683,947 + SO0666 0.25 +0.0 683,954 - SO0666 0.25 +0.4 683,955 - SO0666 0.25 -0.2 683,955 - SO0666 0.25 -0.5 683,955 - SO0666 0.25 -1.0 684,067 + SO0666 0.32 -0.3 684,067 + SO0666 0.32 +0.1 684,081 + SO0666 0.33 +0.7 684,089 - SO0666 0.34 -0.4 684,113 + SO0666 0.35 -0.9 684,121 - SO0666 0.35 -0.5 684,199 + SO0666 0.40 +0.6 684,234 - SO0666 0.42 -0.1 684,277 + SO0666 0.45 -0.2 684,293 - SO0666 0.46 +0.1 684,321 + SO0666 0.48 -0.0 684,321 + SO0666 0.48 -1.9 684,321 + SO0666 0.48 -1.4 684,321 + SO0666 0.48 +0.0 684,396 + SO0666 0.52 +0.2 684,431 + SO0666 0.54 +0.5 684,439 - SO0666 0.55 +2.4 684,439 - SO0666 0.55 -0.5 684,439 - SO0666 0.55 +0.6 684,439 - SO0666 0.55 +0.3 684,454 - SO0666 0.56 -1.8 684,461 - SO0666 0.56 -1.1 684,498 + SO0666 0.58 +0.5 684,506 - SO0666 0.59 -1.1 684,506 - SO0666 0.59 +0.0 684,516 - SO0666 0.60 -0.3
Or see this region's nucleotide sequence