Experiment: m.b. Fusidic 0.03 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_4068 and HP15_4069 are separated by 4 nucleotides HP15_4069 and HP15_4070 are separated by 62 nucleotides HP15_4070 and HP15_4071 overlap by 28 nucleotides HP15_4071 and HP15_4072 overlap by 1 nucleotides
HP15_4068: HP15_4068 - binding-protein-dependent transport systems inner membrane component, at 4,302,826 to 4,303,650
_4068
HP15_4069: HP15_4069 - binding-protein-dependent transport systems inner membrane component, at 4,303,655 to 4,304,506
_4069
HP15_4070: HP15_4070 - antibiotic biosynthesis monooxygenase family enzyme, at 4,304,569 to 4,304,883
_4070
HP15_4071: HP15_4071 - hypothetical protein, at 4,304,856 to 4,304,969
_4071
HP15_4072: HP15_4072 - diguanylate cyclase with PAS/PAC sensor, at 4,304,969 to 4,307,230
_4072
Position (kb) 4304
4305 Strain fitness (log2 ratio) -2
-1
0
1 at 4303.622 kb on - strand at 4303.670 kb on - strand at 4303.771 kb on - strand, within HP15_4069 at 4303.803 kb on + strand, within HP15_4069 at 4303.833 kb on + strand, within HP15_4069 at 4303.840 kb on + strand, within HP15_4069 at 4303.916 kb on + strand, within HP15_4069 at 4303.929 kb on - strand, within HP15_4069 at 4303.929 kb on - strand, within HP15_4069 at 4303.931 kb on + strand, within HP15_4069 at 4303.931 kb on + strand, within HP15_4069 at 4303.931 kb on + strand, within HP15_4069 at 4303.931 kb on + strand, within HP15_4069 at 4303.939 kb on - strand, within HP15_4069 at 4303.939 kb on - strand, within HP15_4069 at 4303.972 kb on + strand, within HP15_4069 at 4303.972 kb on + strand, within HP15_4069 at 4304.033 kb on + strand, within HP15_4069 at 4304.054 kb on - strand, within HP15_4069 at 4304.097 kb on - strand, within HP15_4069 at 4304.131 kb on - strand, within HP15_4069 at 4304.131 kb on - strand, within HP15_4069 at 4304.165 kb on + strand, within HP15_4069 at 4304.173 kb on - strand, within HP15_4069 at 4304.173 kb on - strand, within HP15_4069 at 4304.228 kb on + strand, within HP15_4069 at 4304.236 kb on - strand, within HP15_4069 at 4304.236 kb on - strand, within HP15_4069 at 4304.393 kb on + strand, within HP15_4069 at 4304.393 kb on - strand, within HP15_4069 at 4304.395 kb on + strand, within HP15_4069 at 4304.403 kb on - strand, within HP15_4069 at 4304.403 kb on - strand, within HP15_4069 at 4304.490 kb on - strand at 4304.542 kb on - strand at 4304.587 kb on - strand at 4304.775 kb on - strand, within HP15_4070 at 4304.796 kb on + strand, within HP15_4070 at 4304.806 kb on + strand, within HP15_4070 at 4304.992 kb on + strand at 4305.002 kb on - strand at 4305.007 kb on + strand at 4305.015 kb on - strand at 4305.021 kb on - strand at 4305.151 kb on - strand at 4305.280 kb on + strand, within HP15_4072 at 4305.288 kb on - strand, within HP15_4072 at 4305.288 kb on - strand, within HP15_4072 at 4305.393 kb on - strand, within HP15_4072 at 4305.393 kb on - strand, within HP15_4072 at 4305.396 kb on + strand, within HP15_4072 at 4305.399 kb on - strand, within HP15_4072 at 4305.454 kb on + strand, within HP15_4072 at 4305.481 kb on - strand, within HP15_4072 at 4305.789 kb on + strand, within HP15_4072 at 4305.861 kb on - strand, within HP15_4072
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Fusidic 0.03 mg/ml remove 4,303,622 - +0.1 4,303,670 - +0.4 4,303,771 - HP15_4069 0.14 -0.2 4,303,803 + HP15_4069 0.17 -0.1 4,303,833 + HP15_4069 0.21 -1.6 4,303,840 + HP15_4069 0.22 +0.0 4,303,916 + HP15_4069 0.31 +1.6 4,303,929 - HP15_4069 0.32 -0.9 4,303,929 - HP15_4069 0.32 -0.0 4,303,931 + HP15_4069 0.32 +0.4 4,303,931 + HP15_4069 0.32 +0.3 4,303,931 + HP15_4069 0.32 +1.1 4,303,931 + HP15_4069 0.32 -0.2 4,303,939 - HP15_4069 0.33 +0.2 4,303,939 - HP15_4069 0.33 -0.3 4,303,972 + HP15_4069 0.37 +0.7 4,303,972 + HP15_4069 0.37 -0.9 4,304,033 + HP15_4069 0.44 +0.0 4,304,054 - HP15_4069 0.47 +0.5 4,304,097 - HP15_4069 0.52 -0.1 4,304,131 - HP15_4069 0.56 +0.5 4,304,131 - HP15_4069 0.56 -1.3 4,304,165 + HP15_4069 0.60 -1.5 4,304,173 - HP15_4069 0.61 +0.3 4,304,173 - HP15_4069 0.61 +0.1 4,304,228 + HP15_4069 0.67 -0.3 4,304,236 - HP15_4069 0.68 -0.2 4,304,236 - HP15_4069 0.68 +0.3 4,304,393 + HP15_4069 0.87 +1.4 4,304,393 - HP15_4069 0.87 -0.6 4,304,395 + HP15_4069 0.87 -1.6 4,304,403 - HP15_4069 0.88 +0.0 4,304,403 - HP15_4069 0.88 +1.4 4,304,490 - -0.5 4,304,542 - -0.1 4,304,587 - -1.3 4,304,775 - HP15_4070 0.65 -0.4 4,304,796 + HP15_4070 0.72 -1.4 4,304,806 + HP15_4070 0.75 +0.4 4,304,992 + +0.5 4,305,002 - -0.2 4,305,007 + +1.2 4,305,015 - +0.3 4,305,021 - -0.5 4,305,151 - +0.1 4,305,280 + HP15_4072 0.14 +0.2 4,305,288 - HP15_4072 0.14 +0.8 4,305,288 - HP15_4072 0.14 +0.3 4,305,393 - HP15_4072 0.19 +0.3 4,305,393 - HP15_4072 0.19 +0.2 4,305,396 + HP15_4072 0.19 -0.6 4,305,399 - HP15_4072 0.19 -0.2 4,305,454 + HP15_4072 0.21 -0.3 4,305,481 - HP15_4072 0.23 -2.6 4,305,789 + HP15_4072 0.36 +0.3 4,305,861 - HP15_4072 0.39 -0.7
Or see this region's nucleotide sequence