Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c35750

Experiment: m.b. Spectinomycin 0.00625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Spectinomycin 0.00625 mg/ml
3,747,472	+		PGA1_c35730	0.56	-2.5
3,747,474	+		PGA1_c35730	0.56	-1.7
3,747,524	+		PGA1_c35730	0.61	-2.3
3,747,556	+		PGA1_c35730	0.64	-3.1
3,747,574	-		PGA1_c35730	0.66	-1.4
3,747,583	+		PGA1_c35730	0.67	-1.0
3,747,625	+		PGA1_c35730	0.70	+0.0
3,747,625	+		PGA1_c35730	0.70	+0.2
3,747,626	+		PGA1_c35730	0.71	-1.5
3,747,626	+		PGA1_c35730	0.71	-0.9
3,747,626	+		PGA1_c35730	0.71	-0.1
3,747,626	+		PGA1_c35730	0.71	-1.9
3,747,700	+		PGA1_c35730	0.77	-2.3
3,747,732	-		PGA1_c35730	0.80	-2.6
3,747,736	+		PGA1_c35730	0.81	-0.6
3,747,754	+		PGA1_c35730	0.82	-0.5
3,747,925	+				+0.4
3,747,925	+				-0.6
3,747,932	+				-1.4
3,747,933	-				-0.4
3,747,976	-				-2.1
3,747,977	+				-1.8
3,748,019	-		PGA1_c35740	0.19	-2.0
3,748,085	+		PGA1_c35740	0.35	-1.0
3,748,100	+		PGA1_c35740	0.39	-1.5
3,748,103	-		PGA1_c35740	0.40	+0.3
3,748,108	-		PGA1_c35740	0.41	-2.1
3,748,155	-		PGA1_c35740	0.53	-1.4
3,748,157	+		PGA1_c35740	0.53	-2.2
3,748,228	-		PGA1_c35740	0.71	-1.7
3,748,239	+		PGA1_c35740	0.74	-0.4
3,748,258	+		PGA1_c35740	0.78	+1.2
3,748,258	+		PGA1_c35740	0.78	-3.5
3,748,258	+		PGA1_c35740	0.78	-1.9
3,748,266	-		PGA1_c35740	0.80	-1.5
3,748,266	-		PGA1_c35740	0.80	+0.7
3,748,315	+				-1.2
3,748,350	+				+0.6
3,748,379	+				+0.7
3,748,406	+				+0.5
3,748,406	+				-0.5
3,748,406	+				-0.4
3,748,411	+				+1.1
3,748,475	-		PGA1_c35750	0.11	+0.5
3,748,481	+		PGA1_c35750	0.12	-1.0
3,748,481	+		PGA1_c35750	0.12	+0.5
3,748,489	-		PGA1_c35750	0.14	-0.8
3,748,491	+		PGA1_c35750	0.14	-2.1
3,748,499	-		PGA1_c35750	0.16	+0.4
3,748,509	-		PGA1_c35750	0.18	-1.0
3,748,535	+		PGA1_c35750	0.24	+0.4
3,748,535	+		PGA1_c35750	0.24	+0.6
3,748,535	+		PGA1_c35750	0.24	-0.8
3,748,535	+		PGA1_c35750	0.24	-1.6
3,748,535	+		PGA1_c35750	0.24	-1.2
3,748,535	+		PGA1_c35750	0.24	+0.0
3,748,535	+		PGA1_c35750	0.24	+1.0
3,748,535	+		PGA1_c35750	0.24	-1.9
3,748,535	+		PGA1_c35750	0.24	-1.2
3,748,543	-		PGA1_c35750	0.25	-1.0
3,748,543	-		PGA1_c35750	0.25	+0.3
3,748,603	+		PGA1_c35750	0.38	-1.3
3,748,603	+		PGA1_c35750	0.38	-1.9
3,748,603	+		PGA1_c35750	0.38	+0.3
3,748,603	+		PGA1_c35750	0.38	-0.1
3,748,611	-		PGA1_c35750	0.39	-2.1
3,748,642	-		PGA1_c35750	0.46	-1.7
3,748,662	-		PGA1_c35750	0.50	+0.5
3,748,662	-		PGA1_c35750	0.50	-1.8
3,748,672	+		PGA1_c35750	0.52	+1.3
3,748,672	-		PGA1_c35750	0.52	-1.0
3,748,685	-		PGA1_c35750	0.55	-1.2
3,748,685	-		PGA1_c35750	0.55	-0.6
3,748,687	+		PGA1_c35750	0.55	-0.7
3,748,692	-		PGA1_c35750	0.56	-0.4
3,748,747	-		PGA1_c35750	0.67	-0.9
3,748,765	+		PGA1_c35750	0.71	+0.8
3,748,765	+		PGA1_c35750	0.71	-1.8
3,748,821	-		PGA1_c35750	0.83	+0.5
3,748,963	-				-1.5
3,748,968	+				-2.6
3,748,986	-				+0.2
3,749,025	-		PGA1_c35760	0.15	-0.6
3,749,060	+		PGA1_c35760	0.20	-2.2
3,749,068	-		PGA1_c35760	0.21	-2.2
3,749,107	+		PGA1_c35760	0.26	-0.7
3,749,115	-		PGA1_c35760	0.27	-1.0
3,749,149	-		PGA1_c35760	0.32	-2.4
3,749,152	+		PGA1_c35760	0.32	-0.7
3,749,239	-		PGA1_c35760	0.44	-2.2
3,749,298	-		PGA1_c35760	0.52	-0.6
3,749,305	-		PGA1_c35760	0.53	-0.3
3,749,314	-		PGA1_c35760	0.54	-1.6
3,749,406	-		PGA1_c35760	0.67	-0.9
3,749,407	-		PGA1_c35760	0.67	-0.8
3,749,408	-		PGA1_c35760	0.67	-2.0
3,749,416	-		PGA1_c35760	0.68	-2.5
3,749,443	+		PGA1_c35760	0.72	-1.3
3,749,443	+		PGA1_c35760	0.72	-1.1
3,749,451	-		PGA1_c35760	0.73	-1.7
3,749,456	+		PGA1_c35760	0.73	-1.9
3,749,464	-		PGA1_c35760	0.74	-2.4
3,749,508	+		PGA1_c35760	0.80	-2.5
3,749,516	-		PGA1_c35760	0.81	-0.3
3,749,538	-		PGA1_c35760	0.84	-2.4
3,749,621	+				-2.5
3,749,740	-		PGA1_c35770	0.21	-1.6
3,749,779	+		PGA1_c35770	0.30	-2.4