Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c35680

Experiment: m.b. Spectinomycin 0.00625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Spectinomycin 0.00625 mg/ml
3,738,730	+		PGA1_c35660	0.43	-1.4
3,738,730	+		PGA1_c35660	0.43	-2.6
3,738,733	-		PGA1_c35660	0.44	-1.8
3,738,773	+		PGA1_c35660	0.52	+0.2
3,738,906	+		PGA1_c35660	0.81	-0.2
3,738,924	+		PGA1_c35660	0.85	-2.4
3,738,954	-				-1.3
3,738,978	+				-2.4
3,738,978	+				+0.0
3,738,978	+				-1.6
3,738,978	+				+0.4
3,738,978	+				-0.3
3,738,978	+				-1.2
3,738,978	+				-2.3
3,738,995	+				-1.1
3,739,076	+		PGA1_c35670	0.13	-1.9
3,739,094	+		PGA1_c35670	0.16	-0.4
3,739,150	-		PGA1_c35670	0.24	-1.9
3,739,258	+		PGA1_c35670	0.41	-2.2
3,739,258	+		PGA1_c35670	0.41	-1.9
3,739,347	+		PGA1_c35670	0.55	-2.3
3,739,348	+		PGA1_c35670	0.55	-0.9
3,739,349	+		PGA1_c35670	0.55	-0.5
3,739,371	-		PGA1_c35670	0.58	-0.4
3,739,373	+		PGA1_c35670	0.59	-1.3
3,739,419	+		PGA1_c35670	0.66	-1.1
3,739,428	+		PGA1_c35670	0.67	-0.2
3,739,428	+		PGA1_c35670	0.67	-0.9
3,739,428	+		PGA1_c35670	0.67	-1.2
3,739,436	-		PGA1_c35670	0.68	-2.3
3,739,460	+		PGA1_c35670	0.72	-1.2
3,739,468	-		PGA1_c35670	0.73	-1.2
3,739,500	+		PGA1_c35670	0.78	-1.2
3,739,500	+		PGA1_c35670	0.78	-0.5
3,739,508	-		PGA1_c35670	0.79	-1.2
3,739,563	+		PGA1_c35670	0.88	-2.4
3,739,602	+				-1.9
3,739,609	-				-1.8
3,739,616	+				-0.3
3,739,621	+				+0.2
3,739,626	+				-1.0
3,739,626	+				-0.6
3,739,626	+				-1.8
3,739,629	-				-1.6
3,739,634	+				-1.6
3,739,634	+				+1.0
3,739,634	+				+1.2
3,739,637	-				-1.9
3,739,642	-				+1.2
3,739,712	+				-0.7
3,739,720	-				-3.0
3,739,725	+				-1.2
3,739,739	+				-1.1
3,739,759	+				-1.1
3,739,774	-				-0.4
3,739,781	+				+0.2
3,739,781	+				-2.0
3,739,801	+				-0.8
3,739,801	+				+2.1
3,739,801	+				-0.8
3,739,801	+				-1.6
3,739,839	+		PGA1_c35680	0.14	-1.6
3,739,847	+		PGA1_c35680	0.15	-2.6
3,739,855	-		PGA1_c35680	0.16	-2.7
3,739,855	-		PGA1_c35680	0.16	-2.4
3,739,881	+		PGA1_c35680	0.19	-0.6
3,739,881	+		PGA1_c35680	0.19	-1.4
3,739,881	+		PGA1_c35680	0.19	-2.2
3,739,889	-		PGA1_c35680	0.20	-0.5
3,739,889	-		PGA1_c35680	0.20	-1.3
3,739,915	+		PGA1_c35680	0.23	+0.2
3,739,921	-		PGA1_c35680	0.23	-1.6
3,739,921	-		PGA1_c35680	0.23	-0.2
3,739,923	-		PGA1_c35680	0.24	-2.5
3,739,963	-		PGA1_c35680	0.28	+0.9
3,739,978	+		PGA1_c35680	0.30	-1.6
3,740,093	-		PGA1_c35680	0.43	+0.2
3,740,154	-		PGA1_c35680	0.50	-2.6
3,740,154	-		PGA1_c35680	0.50	-1.2
3,740,154	-		PGA1_c35680	0.50	-2.5
3,740,198	+		PGA1_c35680	0.55	-2.4
3,740,208	-		PGA1_c35680	0.56	-2.4
3,740,232	+		PGA1_c35680	0.59	-0.5
3,740,245	+		PGA1_c35680	0.61	-1.3
3,740,317	-		PGA1_c35680	0.69	-2.3
3,740,331	-		PGA1_c35680	0.70	-2.6
3,740,385	-		PGA1_c35680	0.77	-0.9
3,740,398	+		PGA1_c35680	0.78	+0.6
3,740,411	+		PGA1_c35680	0.80	-0.4
3,740,411	+		PGA1_c35680	0.80	+0.2
3,740,498	-		PGA1_c35680	0.90	-0.9
3,740,514	+				-1.5
3,740,514	+				-1.2
3,740,514	+				-1.6
3,740,522	-				-0.9
3,740,582	+				-1.5
3,740,590	-				+0.1
3,740,603	+				-1.2
3,740,604	-				-1.5
3,740,619	-				-2.4
3,740,624	-				+0.0
3,740,624	-				-2.4
3,740,648	-				-2.1
3,740,650	+				-0.1
3,740,650	+				-0.1
3,740,708	-				+0.0
3,740,715	+				-0.5
3,740,766	+				+0.7
3,740,828	-				-1.1
3,740,838	+		PGA1_c35690	0.10	-1.2
3,740,838	+		PGA1_c35690	0.10	-1.0
3,740,838	+		PGA1_c35690	0.10	-1.1
3,740,838	+		PGA1_c35690	0.10	+1.3
3,740,846	-		PGA1_c35690	0.11	-0.8
3,740,862	-		PGA1_c35690	0.11	-2.4
3,740,902	-		PGA1_c35690	0.13	-2.5
3,740,907	-		PGA1_c35690	0.13	-1.9
3,740,948	+		PGA1_c35690	0.15	-0.2
3,740,948	+		PGA1_c35690	0.15	-1.4
3,740,958	+		PGA1_c35690	0.15	-1.4
3,740,958	+		PGA1_c35690	0.15	-3.0
3,740,958	+		PGA1_c35690	0.15	-1.1
3,740,958	+		PGA1_c35690	0.15	-0.8
3,740,961	-		PGA1_c35690	0.15	-1.2
3,741,044	+		PGA1_c35690	0.19	-1.6
3,741,100	+		PGA1_c35690	0.21	-2.1
3,741,138	+		PGA1_c35690	0.22	-1.5
3,741,169	+		PGA1_c35690	0.24	-1.8
3,741,177	-		PGA1_c35690	0.24	-1.9
3,741,234	+		PGA1_c35690	0.26	-0.6
3,741,263	+		PGA1_c35690	0.28	-1.0
3,741,278	+		PGA1_c35690	0.28	-1.3
3,741,278	+		PGA1_c35690	0.28	-2.2
3,741,278	+		PGA1_c35690	0.28	-1.7
3,741,398	-		PGA1_c35690	0.33	-2.0
3,741,422	-		PGA1_c35690	0.34	-0.3
3,741,429	-		PGA1_c35690	0.34	-0.9
3,741,444	-		PGA1_c35690	0.35	-1.2
3,741,444	-		PGA1_c35690	0.35	-0.7
3,741,496	-		PGA1_c35690	0.37	-1.5
3,741,496	-		PGA1_c35690	0.37	-1.4
3,741,499	-		PGA1_c35690	0.37	-0.8
3,741,527	+		PGA1_c35690	0.38	-1.7
3,741,527	+		PGA1_c35690	0.38	-2.1
3,741,535	-		PGA1_c35690	0.39	-0.2
3,741,535	-		PGA1_c35690	0.39	-2.8
3,741,536	+		PGA1_c35690	0.39	-1.8
3,741,536	+		PGA1_c35690	0.39	-3.6
3,741,544	-		PGA1_c35690	0.39	+0.2
3,741,544	-		PGA1_c35690	0.39	-2.3
3,741,544	-		PGA1_c35690	0.39	-2.0
3,741,544	-		PGA1_c35690	0.39	-0.1
3,741,544	-		PGA1_c35690	0.39	-0.3
3,741,544	-		PGA1_c35690	0.39	-1.4
3,741,566	+		PGA1_c35690	0.40	-3.3