Experiment: m.b. Fusidic 0.03 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2849 and HP15_2850 are separated by 27 nucleotides HP15_2850 and HP15_2851 are separated by 73 nucleotides HP15_2851 and HP15_2852 are separated by 284 nucleotides
HP15_2849: HP15_2849 - SEC-C motif domain protein, at 2,989,084 to 2,989,428
_2849
HP15_2850: HP15_2850 - conserved hypothetical protein, at 2,989,456 to 2,989,890
_2850
HP15_2851: HP15_2851 - transmembrane transport protein, at 2,989,964 to 2,991,103
_2851
HP15_2852: HP15_2852 - glucosylglycerol-phosphate synthase, at 2,991,388 to 2,993,661
_2852
Position (kb)
2989
2990
2991
2992 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2988.999 kb on - strand at 2989.029 kb on + strand at 2989.116 kb on + strand at 2989.131 kb on - strand, within HP15_2849 at 2989.139 kb on - strand, within HP15_2849 at 2989.160 kb on + strand, within HP15_2849 at 2989.211 kb on + strand, within HP15_2849 at 2989.253 kb on + strand, within HP15_2849 at 2989.253 kb on + strand, within HP15_2849 at 2989.253 kb on + strand, within HP15_2849 at 2989.261 kb on - strand, within HP15_2849 at 2989.261 kb on - strand, within HP15_2849 at 2989.282 kb on - strand, within HP15_2849 at 2989.322 kb on + strand, within HP15_2849 at 2989.322 kb on + strand, within HP15_2849 at 2989.330 kb on - strand, within HP15_2849 at 2989.330 kb on - strand, within HP15_2849 at 2989.330 kb on - strand, within HP15_2849 at 2989.335 kb on - strand, within HP15_2849 at 2989.469 kb on + strand at 2989.469 kb on + strand at 2989.497 kb on + strand at 2989.535 kb on - strand, within HP15_2850 at 2989.588 kb on - strand, within HP15_2850 at 2989.756 kb on + strand, within HP15_2850 at 2989.763 kb on + strand, within HP15_2850 at 2989.764 kb on - strand, within HP15_2850 at 2989.881 kb on - strand at 2989.883 kb on + strand at 2989.899 kb on - strand at 2990.076 kb on - strand at 2990.112 kb on + strand, within HP15_2851 at 2990.118 kb on - strand, within HP15_2851 at 2990.170 kb on - strand, within HP15_2851 at 2990.170 kb on - strand, within HP15_2851 at 2990.178 kb on + strand, within HP15_2851 at 2990.188 kb on + strand, within HP15_2851 at 2990.215 kb on + strand, within HP15_2851 at 2990.330 kb on - strand, within HP15_2851 at 2990.401 kb on - strand, within HP15_2851 at 2990.403 kb on - strand, within HP15_2851 at 2990.426 kb on - strand, within HP15_2851 at 2990.473 kb on + strand, within HP15_2851 at 2990.481 kb on - strand, within HP15_2851 at 2990.482 kb on + strand, within HP15_2851 at 2990.540 kb on - strand, within HP15_2851 at 2990.621 kb on + strand, within HP15_2851 at 2990.654 kb on + strand, within HP15_2851 at 2990.716 kb on + strand, within HP15_2851 at 2990.724 kb on - strand, within HP15_2851 at 2990.729 kb on - strand, within HP15_2851 at 2990.757 kb on + strand, within HP15_2851 at 2990.786 kb on - strand, within HP15_2851 at 2990.850 kb on + strand, within HP15_2851 at 2990.862 kb on - strand, within HP15_2851 at 2990.910 kb on + strand, within HP15_2851 at 2990.910 kb on + strand, within HP15_2851 at 2990.910 kb on - strand, within HP15_2851 at 2990.918 kb on - strand, within HP15_2851 at 2990.918 kb on - strand, within HP15_2851 at 2990.920 kb on - strand, within HP15_2851 at 2990.938 kb on + strand, within HP15_2851 at 2990.963 kb on + strand, within HP15_2851 at 2990.963 kb on + strand, within HP15_2851 at 2990.971 kb on - strand, within HP15_2851 at 2990.971 kb on - strand, within HP15_2851 at 2991.052 kb on + strand at 2991.055 kb on - strand at 2991.145 kb on - strand at 2991.288 kb on - strand at 2991.316 kb on + strand at 2991.316 kb on + strand at 2991.444 kb on + strand at 2991.492 kb on + strand at 2991.579 kb on + strand at 2991.605 kb on - strand at 2991.648 kb on - strand, within HP15_2852 at 2991.694 kb on - strand, within HP15_2852 at 2991.792 kb on + strand, within HP15_2852 at 2991.792 kb on + strand, within HP15_2852 at 2991.800 kb on - strand, within HP15_2852 at 2991.800 kb on - strand, within HP15_2852 at 2991.800 kb on - strand, within HP15_2852 at 2991.800 kb on - strand, within HP15_2852 at 2991.800 kb on - strand, within HP15_2852 at 2991.800 kb on - strand, within HP15_2852 at 2991.800 kb on - strand, within HP15_2852 at 2991.802 kb on - strand, within HP15_2852 at 2991.837 kb on + strand, within HP15_2852 at 2991.885 kb on + strand, within HP15_2852 at 2991.957 kb on + strand, within HP15_2852 at 2991.972 kb on - strand, within HP15_2852 at 2992.024 kb on - strand, within HP15_2852 at 2992.066 kb on - strand, within HP15_2852
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Fusidic 0.03 mg/ml remove 2,988,999 - +0.1 2,989,029 + -1.7 2,989,116 + -0.6 2,989,131 - HP15_2849 0.14 +0.2 2,989,139 - HP15_2849 0.16 +0.3 2,989,160 + HP15_2849 0.22 +0.1 2,989,211 + HP15_2849 0.37 +0.3 2,989,253 + HP15_2849 0.49 +0.1 2,989,253 + HP15_2849 0.49 +0.2 2,989,253 + HP15_2849 0.49 +0.4 2,989,261 - HP15_2849 0.51 -0.0 2,989,261 - HP15_2849 0.51 +0.4 2,989,282 - HP15_2849 0.57 +1.1 2,989,322 + HP15_2849 0.69 +2.4 2,989,322 + HP15_2849 0.69 +0.1 2,989,330 - HP15_2849 0.71 +1.5 2,989,330 - HP15_2849 0.71 -2.2 2,989,330 - HP15_2849 0.71 -0.5 2,989,335 - HP15_2849 0.73 -0.0 2,989,469 + -0.2 2,989,469 + -0.3 2,989,497 + -0.2 2,989,535 - HP15_2850 0.18 -0.1 2,989,588 - HP15_2850 0.30 +1.1 2,989,756 + HP15_2850 0.69 +0.4 2,989,763 + HP15_2850 0.71 -0.1 2,989,764 - HP15_2850 0.71 -1.2 2,989,881 - +1.7 2,989,883 + +0.9 2,989,899 - +0.0 2,990,076 - -0.5 2,990,112 + HP15_2851 0.13 -0.4 2,990,118 - HP15_2851 0.14 -0.1 2,990,170 - HP15_2851 0.18 -0.2 2,990,170 - HP15_2851 0.18 +0.5 2,990,178 + HP15_2851 0.19 -1.1 2,990,188 + HP15_2851 0.20 +0.6 2,990,215 + HP15_2851 0.22 -0.9 2,990,330 - HP15_2851 0.32 -0.5 2,990,401 - HP15_2851 0.38 -0.7 2,990,403 - HP15_2851 0.39 +0.3 2,990,426 - HP15_2851 0.41 +0.6 2,990,473 + HP15_2851 0.45 +0.6 2,990,481 - HP15_2851 0.45 +0.1 2,990,482 + HP15_2851 0.45 -0.4 2,990,540 - HP15_2851 0.51 -0.6 2,990,621 + HP15_2851 0.58 +0.4 2,990,654 + HP15_2851 0.61 +0.4 2,990,716 + HP15_2851 0.66 -0.1 2,990,724 - HP15_2851 0.67 +0.6 2,990,729 - HP15_2851 0.67 -0.4 2,990,757 + HP15_2851 0.70 -0.2 2,990,786 - HP15_2851 0.72 +0.1 2,990,850 + HP15_2851 0.78 +0.5 2,990,862 - HP15_2851 0.79 -1.2 2,990,910 + HP15_2851 0.83 +0.6 2,990,910 + HP15_2851 0.83 -0.1 2,990,910 - HP15_2851 0.83 -1.3 2,990,918 - HP15_2851 0.84 -0.9 2,990,918 - HP15_2851 0.84 -0.9 2,990,920 - HP15_2851 0.84 -0.2 2,990,938 + HP15_2851 0.85 +0.5 2,990,963 + HP15_2851 0.88 +0.2 2,990,963 + HP15_2851 0.88 +0.7 2,990,971 - HP15_2851 0.88 -0.7 2,990,971 - HP15_2851 0.88 -0.1 2,991,052 + -1.8 2,991,055 - +0.6 2,991,145 - +0.2 2,991,288 - -0.2 2,991,316 + +0.2 2,991,316 + +1.0 2,991,444 + +0.6 2,991,492 + -0.4 2,991,579 + -2.2 2,991,605 - +1.2 2,991,648 - HP15_2852 0.11 -0.1 2,991,694 - HP15_2852 0.13 -0.3 2,991,792 + HP15_2852 0.18 -0.1 2,991,792 + HP15_2852 0.18 -0.1 2,991,800 - HP15_2852 0.18 -0.6 2,991,800 - HP15_2852 0.18 -0.0 2,991,800 - HP15_2852 0.18 +0.2 2,991,800 - HP15_2852 0.18 -0.4 2,991,800 - HP15_2852 0.18 +0.7 2,991,800 - HP15_2852 0.18 -1.2 2,991,800 - HP15_2852 0.18 +0.3 2,991,802 - HP15_2852 0.18 -0.2 2,991,837 + HP15_2852 0.20 -0.3 2,991,885 + HP15_2852 0.22 +0.4 2,991,957 + HP15_2852 0.25 +0.0 2,991,972 - HP15_2852 0.26 +0.4 2,992,024 - HP15_2852 0.28 +0.2 2,992,066 - HP15_2852 0.30 +0.4
Or see this region's nucleotide sequence