Experiment: m.b. Fusidic 0.03 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2301 and HP15_2302 are separated by 162 nucleotides HP15_2302 and HP15_2303 are separated by 31 nucleotides HP15_2303 and HP15_2304 are separated by 92 nucleotides
HP15_2301: HP15_2301 - response regulator receiver domain protein (CheY-), at 2,422,453 to 2,422,836
_2301
HP15_2302: HP15_2302 - flagellar biosynthesis sigma factor FliA, at 2,422,999 to 2,423,742
_2302
HP15_2303: HP15_2303 - flagellar synthesis regulator FleN, at 2,423,774 to 2,424,562
_2303
HP15_2304: HP15_2304 - flagellar biosynthesis regulator FlhF, at 2,424,655 to 2,425,962
_2304
Position (kb)
2423
2424
2425 Strain fitness (log2 ratio)
-2
-1
0
1 at 2422.987 kb on + strand at 2423.070 kb on + strand at 2423.070 kb on + strand at 2423.070 kb on + strand at 2423.078 kb on - strand, within HP15_2302 at 2423.078 kb on - strand, within HP15_2302 at 2423.078 kb on - strand, within HP15_2302 at 2423.093 kb on - strand, within HP15_2302 at 2423.119 kb on - strand, within HP15_2302 at 2423.231 kb on + strand, within HP15_2302 at 2423.346 kb on + strand, within HP15_2302 at 2423.346 kb on + strand, within HP15_2302 at 2423.346 kb on + strand, within HP15_2302 at 2423.354 kb on - strand, within HP15_2302 at 2423.370 kb on + strand, within HP15_2302 at 2423.448 kb on + strand, within HP15_2302 at 2423.463 kb on - strand, within HP15_2302 at 2423.557 kb on - strand, within HP15_2302 at 2423.564 kb on + strand, within HP15_2302 at 2424.042 kb on + strand, within HP15_2303 at 2424.109 kb on + strand, within HP15_2303 at 2424.117 kb on - strand, within HP15_2303 at 2424.290 kb on + strand, within HP15_2303 at 2424.493 kb on + strand at 2424.625 kb on - strand at 2424.640 kb on - strand at 2424.751 kb on - strand at 2424.762 kb on - strand at 2424.891 kb on + strand, within HP15_2304 at 2425.021 kb on + strand, within HP15_2304 at 2425.024 kb on - strand, within HP15_2304 at 2425.029 kb on - strand, within HP15_2304 at 2425.029 kb on - strand, within HP15_2304 at 2425.034 kb on - strand, within HP15_2304 at 2425.173 kb on + strand, within HP15_2304 at 2425.263 kb on + strand, within HP15_2304 at 2425.296 kb on + strand, within HP15_2304 at 2425.326 kb on + strand, within HP15_2304 at 2425.413 kb on - strand, within HP15_2304 at 2425.413 kb on - strand, within HP15_2304 at 2425.451 kb on - strand, within HP15_2304 at 2425.561 kb on + strand, within HP15_2304
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Fusidic 0.03 mg/ml remove 2,422,987 + -1.4 2,423,070 + -0.3 2,423,070 + -1.5 2,423,070 + +0.7 2,423,078 - HP15_2302 0.11 -1.2 2,423,078 - HP15_2302 0.11 -0.1 2,423,078 - HP15_2302 0.11 -0.8 2,423,093 - HP15_2302 0.13 -1.3 2,423,119 - HP15_2302 0.16 -0.0 2,423,231 + HP15_2302 0.31 -1.1 2,423,346 + HP15_2302 0.47 -1.3 2,423,346 + HP15_2302 0.47 -0.9 2,423,346 + HP15_2302 0.47 -0.5 2,423,354 - HP15_2302 0.48 -0.9 2,423,370 + HP15_2302 0.50 -1.8 2,423,448 + HP15_2302 0.60 -0.5 2,423,463 - HP15_2302 0.62 -1.2 2,423,557 - HP15_2302 0.75 -1.6 2,423,564 + HP15_2302 0.76 -0.2 2,424,042 + HP15_2303 0.34 -0.9 2,424,109 + HP15_2303 0.42 -2.7 2,424,117 - HP15_2303 0.43 -1.4 2,424,290 + HP15_2303 0.65 -0.9 2,424,493 + -0.7 2,424,625 - -0.9 2,424,640 - -2.3 2,424,751 - -1.5 2,424,762 - -1.3 2,424,891 + HP15_2304 0.18 -0.1 2,425,021 + HP15_2304 0.28 -0.7 2,425,024 - HP15_2304 0.28 -0.3 2,425,029 - HP15_2304 0.29 -0.7 2,425,029 - HP15_2304 0.29 -1.3 2,425,034 - HP15_2304 0.29 -1.6 2,425,173 + HP15_2304 0.40 -0.3 2,425,263 + HP15_2304 0.46 -0.5 2,425,296 + HP15_2304 0.49 -0.6 2,425,326 + HP15_2304 0.51 -0.5 2,425,413 - HP15_2304 0.58 -1.0 2,425,413 - HP15_2304 0.58 -1.0 2,425,451 - HP15_2304 0.61 -0.1 2,425,561 + HP15_2304 0.69 -0.5
Or see this region's nucleotide sequence