Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c23230

Experiment: m.b. Spectinomycin 0.00625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Spectinomycin 0.00625 mg/ml
2,409,066	-		PGA1_c23220	0.50	-0.2
2,409,074	-		PGA1_c23220	0.51	-0.7
2,409,174	+		PGA1_c23220	0.59	-0.3
2,409,182	-		PGA1_c23220	0.59	+0.8
2,409,189	+		PGA1_c23220	0.60	+1.6
2,409,189	-		PGA1_c23220	0.60	+2.8
2,409,225	+		PGA1_c23220	0.63	+0.7
2,409,225	+		PGA1_c23220	0.63	-0.4
2,409,233	-		PGA1_c23220	0.63	+0.8
2,409,233	-		PGA1_c23220	0.63	-0.9
2,409,279	-		PGA1_c23220	0.67	+0.9
2,409,286	-		PGA1_c23220	0.67	-1.9
2,409,445	-		PGA1_c23220	0.80	-0.2
2,409,455	-		PGA1_c23220	0.81	-1.4
2,409,462	-		PGA1_c23220	0.81	-0.8
2,409,474	+		PGA1_c23220	0.82	-1.4
2,409,478	-		PGA1_c23220	0.82	-1.6
2,409,512	+		PGA1_c23220	0.85	-1.4
2,409,520	-		PGA1_c23220	0.86	-1.0
2,409,527	+		PGA1_c23220	0.86	+0.4
2,409,527	+		PGA1_c23220	0.86	-0.2
2,409,527	+		PGA1_c23220	0.86	-0.1
2,409,530	+		PGA1_c23220	0.86	+1.6
2,409,535	-		PGA1_c23220	0.87	+0.5
2,409,535	-		PGA1_c23220	0.87	-0.1
2,409,546	+		PGA1_c23220	0.88	-1.0
2,409,584	-				+0.2
2,409,607	+				+0.6
2,409,636	-				-0.3
2,409,638	+				+2.0
2,409,645	+				+1.6
2,409,662	+				+0.8
2,410,060	+				+0.6
2,410,068	+				+0.3
2,410,076	-				-0.5
2,410,078	+				+0.4
2,410,078	+				+0.6
2,410,078	+				+0.8
2,410,081	-				-0.2
2,410,083	+				-0.8
2,410,086	-				-1.0
2,410,133	-				-0.2
2,410,139	+		PGA1_c23230	0.10	+0.8
2,410,209	-		PGA1_c23230	0.19	-1.1
2,410,227	+		PGA1_c23230	0.21	+0.6
2,410,229	-		PGA1_c23230	0.21	-0.3
2,410,243	+		PGA1_c23230	0.22	+0.6
2,410,251	-		PGA1_c23230	0.23	-0.8
2,410,258	+		PGA1_c23230	0.24	-0.4
2,410,325	-		PGA1_c23230	0.32	-0.2
2,410,325	-		PGA1_c23230	0.32	-1.0
2,410,352	-		PGA1_c23230	0.35	+0.7
2,410,369	-		PGA1_c23230	0.37	-2.4
2,410,392	-		PGA1_c23230	0.40	+0.2
2,410,392	-		PGA1_c23230	0.40	-0.8
2,410,417	+		PGA1_c23230	0.43	-0.9
2,410,425	-		PGA1_c23230	0.44	+0.8
2,410,524	-		PGA1_c23230	0.55	+0.6
2,410,524	-		PGA1_c23230	0.55	+1.0
2,410,525	-		PGA1_c23230	0.55	+0.2
2,410,593	-		PGA1_c23230	0.63	-1.5
2,410,593	-		PGA1_c23230	0.63	-0.1
2,410,640	-		PGA1_c23230	0.68	-0.4
2,410,646	+		PGA1_c23230	0.69	-1.0
2,410,646	+		PGA1_c23230	0.69	-0.2
2,410,646	+		PGA1_c23230	0.69	+0.8
2,410,648	+		PGA1_c23230	0.69	-0.8
2,410,654	-		PGA1_c23230	0.70	+0.4
2,410,677	-		PGA1_c23230	0.73	-0.0
2,410,677	-		PGA1_c23230	0.73	+0.5
2,410,742	+		PGA1_c23230	0.80	+1.0
2,410,749	+		PGA1_c23230	0.81	+2.0
2,410,750	-		PGA1_c23230	0.81	-0.7
2,410,765	+		PGA1_c23230	0.83	-2.0
2,410,765	+		PGA1_c23230	0.83	+0.1
2,410,765	+		PGA1_c23230	0.83	-0.2
2,410,765	+		PGA1_c23230	0.83	+0.4
2,410,765	+		PGA1_c23230	0.83	-0.8
2,410,765	+		PGA1_c23230	0.83	-2.0
2,410,773	-		PGA1_c23230	0.84	-2.1
2,410,773	-		PGA1_c23230	0.84	+1.2
2,410,773	-		PGA1_c23230	0.84	-1.0
2,410,773	-		PGA1_c23230	0.84	+0.3
2,410,773	-		PGA1_c23230	0.84	+0.2
2,410,773	-		PGA1_c23230	0.84	+0.2
2,410,773	-		PGA1_c23230	0.84	-0.6
2,410,778	-		PGA1_c23230	0.84	-2.1
2,410,789	+		PGA1_c23230	0.86	-1.4
2,410,799	+		PGA1_c23230	0.87	-0.3
2,410,799	+		PGA1_c23230	0.87	-0.8
2,410,799	+		PGA1_c23230	0.87	+0.6
2,410,799	+		PGA1_c23230	0.87	+0.2
2,410,807	-		PGA1_c23230	0.88	+1.6
2,410,807	-		PGA1_c23230	0.88	-0.2
2,410,807	-		PGA1_c23230	0.88	+1.4
2,410,807	-		PGA1_c23230	0.88	-0.2
2,410,807	-		PGA1_c23230	0.88	-0.6
2,410,807	-		PGA1_c23230	0.88	+1.6
2,410,819	+		PGA1_c23230	0.89	+2.4
2,410,833	+				+0.1
2,410,841	-				-2.0
2,410,865	-				-0.1
2,410,899	-				-1.0
2,410,910	+				+0.1
2,410,920	+				-0.9
2,410,927	+				-0.8
2,410,927	+				+0.7
2,410,927	+				-1.4
2,410,927	+				+0.8
2,410,927	+				-1.0
2,410,927	+				+1.1
2,410,927	+				-1.2
2,410,927	+				+0.1
2,410,927	+				-0.6
2,410,927	+				+0.5
2,410,927	+				-1.2
2,410,927	+				+1.1
2,410,927	+				+0.8
2,410,927	+				-0.8
2,410,927	+				+0.6
2,410,927	+				+0.6
2,410,927	+				+0.0
2,410,927	+				+2.3
2,410,927	+				-0.3
2,410,928	-				+0.7
2,410,928	-				+0.6
2,410,935	-				+0.8
2,410,935	-				-0.0
2,410,935	-				-1.9
2,410,935	-				+1.8
2,410,935	-				+0.2
2,410,935	-				+2.9
2,410,935	-				-2.3
2,410,935	-				-0.3
2,410,935	-				-0.0
2,410,935	-				+0.4
2,410,935	-				-1.9
2,410,935	-				-0.3
2,410,935	-				-0.4
2,410,935	-				-0.4
2,410,935	-				+0.7
2,410,935	-				+1.1
2,410,935	-				+2.3
2,410,935	-				+0.2
2,410,935	-				-2.2
2,410,935	-				+0.2
2,410,936	-				+0.2
2,410,939	+				-1.6
2,410,939	+				-2.3
2,410,939	+				+0.1
2,410,947	-				-0.2
2,410,947	-				-0.8
2,410,947	-				-2.0
2,410,947	-				+0.4
2,410,947	-				-1.0
2,410,964	+				-2.4
2,410,969	+				-1.2
2,410,969	+				+1.0
2,410,969	+				-0.4
2,410,969	+				+0.3
2,410,969	+				-0.6
2,410,969	+				-1.2
2,410,969	+				-0.1
2,410,969	+				+1.0
2,410,969	+				-1.0
2,410,969	+				-0.0
2,410,969	+				+0.2
2,410,969	+				+0.1
2,410,969	+				+1.3
2,410,969	+				-0.9
2,410,969	+				-0.6
2,410,969	+				+0.2
2,410,969	+				+0.3
2,410,969	+				-1.2
2,410,969	+				-1.9
2,410,969	+				+0.1
2,410,969	+				-0.2
2,410,969	+				-0.0
2,410,969	+				+0.1
2,410,969	+				-0.2
2,410,969	+				+1.2
2,410,969	+				+1.0
2,410,969	+				-1.8
2,410,969	+				+0.4
2,410,969	+				+1.8
2,410,969	+				+1.1
2,410,969	+				+0.6
2,410,969	+				-1.3
2,410,969	+				-0.9
2,410,969	+				+1.1
2,410,969	+				+0.7
2,410,969	+				+0.6
2,410,969	+				-0.7
2,410,969	+				+0.6
2,410,969	+				-0.7
2,410,969	+				-1.6
2,410,969	+				-0.8
2,410,969	+				-0.2
2,410,972	-				+1.1
2,410,974	+				+0.5
2,410,974	+				+0.9
2,410,974	+				+0.5
2,410,974	+				-0.6
2,410,974	+				-0.8
2,410,974	+				-0.1
2,410,977	-				+0.2
2,410,977	-				+0.2
2,410,977	-				-1.4
2,410,977	-				+1.0
2,410,977	-				+2.6
2,410,977	-				-0.4
2,410,977	-				-0.2
2,410,977	-				+0.8
2,410,977	-				-1.3
2,410,977	-				+1.7
2,410,977	-				+0.3
2,410,977	-				+0.5
2,410,977	-				-0.8
2,410,977	-				-0.6
2,410,977	-				-0.1
2,410,977	-				+0.1
2,410,977	-				+0.6
2,410,977	-				+1.3
2,410,977	-				-0.6
2,410,977	-				-0.7
2,410,977	-				-0.4
2,410,977	-				-0.6
2,410,977	-				-0.8
2,410,977	-				-1.0
2,410,977	-				+0.2
2,410,977	-				-1.5
2,410,977	-				+1.6
2,410,977	-				-0.0
2,410,977	-				-0.9
2,410,977	-				+0.3
2,410,977	-				+0.1
2,410,977	-				+0.1
2,410,977	-				-0.3
2,410,977	-				-2.1
2,410,977	-				-0.9
2,410,977	-				+0.8
2,410,977	-				-0.0
2,410,977	-				+0.1
2,410,977	-				-1.3
2,410,977	-				+0.7
2,410,977	-				-0.0
2,410,977	-				-0.0
2,410,977	-				-0.9
2,410,977	-				+0.1
2,410,977	-				-0.4
2,410,977	-				+0.6
2,410,977	-				-1.2
2,410,982	+				+0.8
2,410,982	+				-0.1
2,410,982	-				-1.5
2,410,982	-				+0.7
2,410,984	+				+1.0
2,410,984	+				+2.9
2,410,984	+				-1.6
2,410,988	-				-1.0
2,410,992	-				+0.1
2,410,992	-				-1.4
2,410,992	-				+1.1
2,410,992	-				-0.5
2,410,992	-				+0.3
2,410,992	-				+1.4
2,410,992	-				-0.4
2,411,013	-				+0.8
2,411,013	-				-1.5
2,411,026	+				-0.1
2,411,034	-				-1.0
2,411,129	+				-0.3
2,411,175	+				-2.2
2,411,176	+				+1.6
2,411,183	-				+0.1
2,411,184	-				+1.4
2,411,184	-				-0.5
2,411,185	+				+0.1
2,411,197	+				-0.7
2,411,215	-				+1.0
2,411,215	-				-1.8
2,411,255	+				+0.9
2,411,255	+				-0.2
2,411,255	+				+2.6
2,411,255	+				+0.9
2,411,255	+				+0.3
2,411,255	+				-0.5
2,411,265	+				-1.1
2,411,265	+				-0.6
2,411,265	+				+0.0
2,411,265	+				-0.3
2,411,265	+				+0.4
2,411,265	+				-0.9
2,411,265	+				+1.0
2,411,265	+				+2.1
2,411,265	+				-1.0
2,411,265	-				-0.2
2,411,266	-				+1.0
2,411,268	-				-0.6
2,411,268	-				+1.6
2,411,271	+				+1.4
2,411,273	-				+0.7
2,411,273	-				+0.9
2,411,273	-				-0.0
2,411,273	-				-0.0
2,411,273	-				-0.0
2,411,273	-				+1.3
2,411,273	-				-0.3
2,411,273	-				-1.1
2,411,273	-				-0.3
2,411,273	-				-0.3
2,411,276	+				-0.0
2,411,277	+				+2.4
2,411,277	+				+2.0
2,411,277	+				-0.9
2,411,277	+				-0.4
2,411,278	-				+0.6
2,411,278	-				+1.6
2,411,278	-				+0.0
2,411,284	-				+0.8
2,411,285	-				+1.2
2,411,285	-				+0.8
2,411,289	+				+0.0
2,411,291	+				+0.3
2,411,297	-				-1.6
2,411,299	-				+0.2
2,411,322	-				-0.6
2,411,335	+				-0.6
2,411,335	+				-0.1
2,411,335	+				-0.8
2,411,335	+				+1.8
2,411,335	+				+0.1
2,411,335	+				+0.2
2,411,335	+				-0.3
2,411,335	+				+2.1
2,411,335	+				-2.0
2,411,335	+				+1.3
2,411,335	+				-1.8
2,411,335	+				-0.4
2,411,337	+				+2.0
2,411,340	+				+1.6
2,411,340	+				-1.0
2,411,341	-				+0.6
2,411,343	-				-0.4
2,411,343	-				+0.8
2,411,343	-				+0.2
2,411,343	-				+0.8
2,411,343	-				-0.7
2,411,343	-				-0.0
2,411,343	-				-0.9
2,411,343	-				-0.6
2,411,343	-				-1.2
2,411,343	-				-0.9
2,411,343	-				-0.6
2,411,343	-				+0.3
2,411,343	-				-0.9
2,411,343	-				+1.9
2,411,343	-				+0.1
2,411,343	-				+1.3
2,411,343	-				-1.3
2,411,343	-				+0.7
2,411,343	-				+0.6
2,411,343	-				+1.6
2,411,343	-				-0.6
2,411,343	-				-0.2
2,411,343	-				-0.8
2,411,343	-				-0.4
2,411,343	-				-1.6
2,411,343	-				+1.0
2,411,343	-				-0.2
2,411,343	-				+1.6
2,411,345	-				+0.4
2,411,348	-				-0.9
2,411,358	-				+0.2
2,411,358	-				-0.9
2,411,358	-				-0.3
2,411,360	+				-0.4
2,411,360	+				-0.0
2,411,363	+				-2.1
2,411,363	+				+1.6
2,411,363	+				+0.4
2,411,363	-				+0.1
2,411,365	+				-0.0
2,411,371	-				-0.4
2,411,373	+				-0.1
2,411,381	-				-0.1
2,411,382	+				-1.4
2,411,382	+				+0.6
2,411,382	+				+0.6
2,411,382	+				+1.0
2,411,382	-				-0.8
2,411,390	+				-1.9
2,411,390	-				-0.4
2,411,390	-				-0.9
2,411,390	-				-0.7
2,411,390	-				+1.1
2,411,391	-				-1.8
2,411,393	+				-1.4
2,411,393	+				-0.2
2,411,403	+				-0.3
2,411,418	+				-1.8
2,411,418	+				+0.4
2,411,440	+				-0.4
2,411,440	+				-0.6
2,411,440	+				-0.7
2,411,440	+				-0.4
2,411,440	+				-2.3
2,411,440	+				-0.8
2,411,440	+				-0.0
2,411,440	+				+0.0
2,411,440	+				-0.5
2,411,440	+				-2.4
2,411,448	-				+1.6
2,411,448	-				+0.8
2,411,448	-				-0.4
2,411,469	+				-1.7
2,411,476	+				+0.6
2,411,476	+				-0.4
2,411,484	-				-1.3
2,411,484	-				+0.7
2,411,484	-				-0.3
2,411,484	-				-0.8
2,411,486	+				-1.2
2,411,521	-				+0.3
2,411,522	-				+0.1
2,411,569	+				+0.8
2,411,578	+				+0.1
2,411,578	+				-1.4
2,411,578	+				-0.4
2,411,578	+				-0.9
2,411,578	+				+1.9
2,411,578	+				+0.7
2,411,586	-				-0.0
2,411,589	+				+0.1
2,411,630	+				+0.7
2,411,636	+				+3.9
2,411,654	+				-0.1
2,411,662	-				-0.2
2,411,664	-				+1.2
2,411,664	-				-1.3
2,411,664	-				+1.1
2,411,664	-				-0.6
2,411,671	-				-2.1
2,411,674	-				-0.1
2,411,728	+				-0.8
2,411,731	-				-0.6
2,411,731	-				+0.7
2,411,756	+				-0.3
2,411,850	-				+0.1
2,411,850	-				-1.8
2,411,896	-				-1.6