Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c23220

Experiment: m.b. Spectinomycin 0.00625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Spectinomycin 0.00625 mg/ml
2,407,423	+		PGA1_c23200	0.78	-0.3
2,407,490	+		PGA1_c23200	0.85	+0.8
2,407,490	+		PGA1_c23200	0.85	-1.9
2,407,509	+		PGA1_c23200	0.86	-0.4
2,407,509	+		PGA1_c23200	0.86	+0.9
2,407,546	+				+0.1
2,407,563	-				+0.5
2,407,583	+				+0.9
2,407,641	-				-0.7
2,407,642	+				-0.2
2,407,648	+				-0.1
2,407,650	-				-0.0
2,407,661	-				-0.9
2,407,684	-				-0.0
2,407,723	-				+0.7
2,407,758	+				-2.3
2,407,790	-				+1.9
2,407,798	-				+0.2
2,407,956	+		PGA1_c23210	0.35	+0.7
2,408,001	+		PGA1_c23210	0.47	+0.8
2,408,012	+		PGA1_c23210	0.50	+1.6
2,408,071	+		PGA1_c23210	0.65	+1.7
2,408,079	-		PGA1_c23210	0.67	+1.6
2,408,112	-		PGA1_c23210	0.75	+1.1
2,408,112	-		PGA1_c23210	0.75	-0.3
2,408,114	+		PGA1_c23210	0.76	+1.3
2,408,234	-				+1.1
2,408,278	+				+1.6
2,408,298	+				+0.9
2,408,306	-				-0.0
2,408,312	+				+4.4
2,408,341	+				+1.2
2,408,349	-				-0.9
2,408,358	-				+0.9
2,408,506	-				-0.8
2,408,554	-		PGA1_c23220	0.11	-0.8
2,408,708	+		PGA1_c23220	0.23	+3.0
2,408,708	+		PGA1_c23220	0.23	+0.7
2,408,809	+		PGA1_c23220	0.31	-1.5
2,408,841	+		PGA1_c23220	0.33	+0.1
2,408,921	+		PGA1_c23220	0.39	+0.1
2,408,921	+		PGA1_c23220	0.39	+0.6
2,409,066	-		PGA1_c23220	0.50	-0.2
2,409,074	-		PGA1_c23220	0.51	-0.7
2,409,174	+		PGA1_c23220	0.59	-0.3
2,409,182	-		PGA1_c23220	0.59	+0.8
2,409,189	+		PGA1_c23220	0.60	+1.6
2,409,189	-		PGA1_c23220	0.60	+2.8
2,409,225	+		PGA1_c23220	0.63	+0.7
2,409,225	+		PGA1_c23220	0.63	-0.4
2,409,233	-		PGA1_c23220	0.63	+0.8
2,409,233	-		PGA1_c23220	0.63	-0.9
2,409,279	-		PGA1_c23220	0.67	+0.9
2,409,286	-		PGA1_c23220	0.67	-1.9
2,409,445	-		PGA1_c23220	0.80	-0.2
2,409,455	-		PGA1_c23220	0.81	-1.4
2,409,462	-		PGA1_c23220	0.81	-0.8
2,409,474	+		PGA1_c23220	0.82	-1.4
2,409,478	-		PGA1_c23220	0.82	-1.6
2,409,512	+		PGA1_c23220	0.85	-1.4
2,409,520	-		PGA1_c23220	0.86	-1.0
2,409,527	+		PGA1_c23220	0.86	+0.4
2,409,527	+		PGA1_c23220	0.86	-0.2
2,409,527	+		PGA1_c23220	0.86	-0.1
2,409,530	+		PGA1_c23220	0.86	+1.6
2,409,535	-		PGA1_c23220	0.87	+0.5
2,409,535	-		PGA1_c23220	0.87	-0.1
2,409,546	+		PGA1_c23220	0.88	-1.0
2,409,584	-				+0.2
2,409,607	+				+0.6
2,409,636	-				-0.3
2,409,638	+				+2.0
2,409,645	+				+1.6
2,409,662	+				+0.8
2,410,060	+				+0.6
2,410,068	+				+0.3
2,410,076	-				-0.5
2,410,078	+				+0.4
2,410,078	+				+0.6
2,410,078	+				+0.8
2,410,081	-				-0.2
2,410,083	+				-0.8
2,410,086	-				-1.0
2,410,133	-				-0.2
2,410,139	+		PGA1_c23230	0.10	+0.8
2,410,209	-		PGA1_c23230	0.19	-1.1
2,410,227	+		PGA1_c23230	0.21	+0.6
2,410,229	-		PGA1_c23230	0.21	-0.3
2,410,243	+		PGA1_c23230	0.22	+0.6
2,410,251	-		PGA1_c23230	0.23	-0.8
2,410,258	+		PGA1_c23230	0.24	-0.4
2,410,325	-		PGA1_c23230	0.32	-0.2
2,410,325	-		PGA1_c23230	0.32	-1.0
2,410,352	-		PGA1_c23230	0.35	+0.7
2,410,369	-		PGA1_c23230	0.37	-2.4
2,410,392	-		PGA1_c23230	0.40	+0.2
2,410,392	-		PGA1_c23230	0.40	-0.8
2,410,417	+		PGA1_c23230	0.43	-0.9
2,410,425	-		PGA1_c23230	0.44	+0.8
2,410,524	-		PGA1_c23230	0.55	+0.6
2,410,524	-		PGA1_c23230	0.55	+1.0
2,410,525	-		PGA1_c23230	0.55	+0.2
2,410,593	-		PGA1_c23230	0.63	-1.5
2,410,593	-		PGA1_c23230	0.63	-0.1
2,410,640	-		PGA1_c23230	0.68	-0.4
2,410,646	+		PGA1_c23230	0.69	-1.0
2,410,646	+		PGA1_c23230	0.69	-0.2
2,410,646	+		PGA1_c23230	0.69	+0.8
2,410,648	+		PGA1_c23230	0.69	-0.8
2,410,654	-		PGA1_c23230	0.70	+0.4
2,410,677	-		PGA1_c23230	0.73	-0.0
2,410,677	-		PGA1_c23230	0.73	+0.5