Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c23190

Experiment: m.b. Spectinomycin 0.00625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Spectinomycin 0.00625 mg/ml
2,403,845	-				+0.6
2,403,856	+				-0.0
2,403,856	+				-0.1
2,403,864	-				+0.3
2,403,891	-				-0.2
2,403,905	+				+1.6
2,403,917	+				+0.1
2,403,941	+				-0.0
2,403,949	-				+1.0
2,403,998	+				+1.3
2,404,186	+		PGA1_c23180	0.30	+0.4
2,404,194	-		PGA1_c23180	0.31	+2.1
2,404,203	+		PGA1_c23180	0.32	-0.3
2,404,231	+		PGA1_c23180	0.35	-0.0
2,404,261	-		PGA1_c23180	0.39	+1.3
2,404,266	+		PGA1_c23180	0.39	-0.4
2,404,274	-		PGA1_c23180	0.40	-1.0
2,404,274	-		PGA1_c23180	0.40	+0.5
2,404,333	+		PGA1_c23180	0.47	+2.1
2,404,333	+		PGA1_c23180	0.47	-0.0
2,404,341	-		PGA1_c23180	0.48	+1.0
2,404,357	+		PGA1_c23180	0.50	-0.9
2,404,373	-		PGA1_c23180	0.52	-0.7
2,404,401	-		PGA1_c23180	0.55	-0.2
2,404,419	+		PGA1_c23180	0.57	-0.6
2,404,427	-		PGA1_c23180	0.58	-0.8
2,404,427	-		PGA1_c23180	0.58	-0.3
2,404,561	+		PGA1_c23180	0.73	+0.2
2,404,604	-		PGA1_c23180	0.78	-0.8
2,404,697	+		PGA1_c23180	0.88	+0.2
2,404,801	-				-0.4
2,404,857	+				-1.2
2,404,863	+				-1.2
2,404,906	+				-0.0
2,405,044	+		PGA1_c23190	0.17	+1.2
2,405,133	+		PGA1_c23190	0.23	+1.3
2,405,149	+		PGA1_c23190	0.25	+0.6
2,405,157	-		PGA1_c23190	0.25	-1.1
2,405,159	+		PGA1_c23190	0.25	-0.7
2,405,168	+		PGA1_c23190	0.26	+0.7
2,405,195	+		PGA1_c23190	0.28	+0.7
2,405,203	-		PGA1_c23190	0.29	-0.6
2,405,223	+		PGA1_c23190	0.30	-0.2
2,405,246	-		PGA1_c23190	0.32	+0.6
2,405,287	-		PGA1_c23190	0.35	-0.2
2,405,293	+		PGA1_c23190	0.35	-0.3
2,405,293	+		PGA1_c23190	0.35	-2.8
2,405,293	+		PGA1_c23190	0.35	+0.6
2,405,293	+		PGA1_c23190	0.35	-0.4
2,405,293	+		PGA1_c23190	0.35	+0.1
2,405,293	+		PGA1_c23190	0.35	+0.7
2,405,293	+		PGA1_c23190	0.35	-3.3
2,405,301	-		PGA1_c23190	0.36	+1.2
2,405,371	+		PGA1_c23190	0.41	+0.7
2,405,445	+		PGA1_c23190	0.46	+0.2
2,405,557	+		PGA1_c23190	0.54	-0.3
2,405,687	-		PGA1_c23190	0.64	-0.5
2,405,866	-		PGA1_c23190	0.77	+0.6
2,405,869	+		PGA1_c23190	0.77	+0.9
2,405,869	+		PGA1_c23190	0.77	-1.1
2,405,869	+		PGA1_c23190	0.77	+0.9
2,405,869	+		PGA1_c23190	0.77	-0.1
2,405,869	+		PGA1_c23190	0.77	-2.8
2,405,869	+		PGA1_c23190	0.77	-1.3
2,405,869	+		PGA1_c23190	0.77	-1.5
2,405,869	+		PGA1_c23190	0.77	+0.9
2,405,869	+		PGA1_c23190	0.77	-0.4
2,405,869	+		PGA1_c23190	0.77	+1.8
2,405,869	+		PGA1_c23190	0.77	-0.2
2,405,877	-		PGA1_c23190	0.77	-0.3
2,405,877	-		PGA1_c23190	0.77	-0.9
2,405,877	-		PGA1_c23190	0.77	-0.0
2,405,877	-		PGA1_c23190	0.77	+1.6
2,405,877	-		PGA1_c23190	0.77	-1.5
2,405,877	-		PGA1_c23190	0.77	+0.7
2,405,877	-		PGA1_c23190	0.77	+0.6
2,405,877	-		PGA1_c23190	0.77	+0.0
2,405,877	-		PGA1_c23190	0.77	-1.1
2,405,877	-		PGA1_c23190	0.77	+0.2
2,405,877	-		PGA1_c23190	0.77	-0.7
2,405,879	+		PGA1_c23190	0.78	+0.1
2,405,879	+		PGA1_c23190	0.78	-0.3
2,405,887	-		PGA1_c23190	0.78	+0.4
2,405,887	-		PGA1_c23190	0.78	+1.1
2,405,899	+		PGA1_c23190	0.79	-0.9
2,405,914	-		PGA1_c23190	0.80	-0.4
2,405,964	+		PGA1_c23190	0.84	-0.2
2,406,018	-		PGA1_c23190	0.88	-1.8
2,406,019	+		PGA1_c23190	0.88	+0.1
2,406,019	+		PGA1_c23190	0.88	+0.2
2,406,123	-				-1.0
2,406,130	-				+0.2
2,406,214	-				+0.1
2,406,307	-				-2.4
2,406,325	+				+1.0
2,406,381	+				-1.0
2,406,435	+				-0.4
2,406,437	+				-1.9
2,406,438	-				-1.4
2,406,446	+				+0.6
2,406,456	+				+0.8
2,406,486	-				+0.2
2,406,507	+				-0.0
2,406,572	+				+0.4
2,406,591	+				+0.8
2,406,606	+				+1.6
2,406,706	-				+0.8
2,406,706	-				+0.2
2,406,714	-				+0.2
2,406,738	+		PGA1_c23200	0.11	-0.4
2,406,755	+		PGA1_c23200	0.13	-0.4
2,406,756	-		PGA1_c23200	0.13	-0.3
2,406,756	-		PGA1_c23200	0.13	+0.6
2,406,816	-		PGA1_c23200	0.19	+0.5
2,406,894	+		PGA1_c23200	0.26	-2.3
2,406,902	-		PGA1_c23200	0.27	-0.1
2,406,983	+		PGA1_c23200	0.35	+0.2
2,407,016	+		PGA1_c23200	0.38	+0.6
2,407,016	+		PGA1_c23200	0.38	+1.2
2,407,016	+		PGA1_c23200	0.38	+0.8
2,407,016	+		PGA1_c23200	0.38	-1.1
2,407,016	+		PGA1_c23200	0.38	+1.0
2,407,016	+		PGA1_c23200	0.38	+0.8
2,407,026	-		PGA1_c23200	0.39	-0.6
2,407,034	-		PGA1_c23200	0.40	-0.6