Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c23030

Experiment: m.b. Spectinomycin 0.00625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Spectinomycin 0.00625 mg/ml
2,385,286	+		PGA1_c22990	0.83	-1.3
2,385,376	+				-0.4
2,385,514	-				-0.4
2,385,549	+				+0.8
2,385,552	-				+2.0
2,385,552	-				-0.0
2,385,559	-				+0.4
2,385,571	+				+1.7
2,385,686	-		PGA1_c23000	0.44	+1.1
2,385,740	-		PGA1_c23000	0.63	-2.7
2,385,740	-		PGA1_c23000	0.63	+1.3
2,385,850	+				+0.1
2,385,858	-		PGA1_c23010	0.12	+1.3
2,385,858	-		PGA1_c23010	0.12	-1.0
2,385,858	-		PGA1_c23010	0.12	-1.6
2,385,890	+		PGA1_c23010	0.27	+0.8
2,385,914	+		PGA1_c23010	0.37	-0.3
2,385,922	-		PGA1_c23010	0.41	-1.0
2,385,961	+		PGA1_c23010	0.58	+0.6
2,385,961	+		PGA1_c23010	0.58	-0.4
2,385,961	+		PGA1_c23010	0.58	-0.4
2,385,961	+		PGA1_c23010	0.58	+1.6
2,385,969	-		PGA1_c23010	0.62	+0.3
2,385,969	-		PGA1_c23010	0.62	-1.3
2,385,969	-		PGA1_c23010	0.62	+1.6
2,386,016	+		PGA1_c23010	0.83	-1.1
2,386,042	+				+0.2
2,386,049	+				-0.4
2,386,050	-				+1.6
2,386,052	+				-1.0
2,386,072	-		PGA1_c23020	0.10	+0.7
2,386,083	+		PGA1_c23020	0.16	-0.5
2,386,083	+		PGA1_c23020	0.16	+0.2
2,386,091	-		PGA1_c23020	0.20	+0.2
2,386,091	-		PGA1_c23020	0.20	-1.8
2,386,091	-		PGA1_c23020	0.20	-0.0
2,386,091	-		PGA1_c23020	0.20	+1.2
2,386,091	-		PGA1_c23020	0.20	-0.6
2,386,108	-		PGA1_c23020	0.28	-1.0
2,386,110	+		PGA1_c23020	0.29	-1.0
2,386,110	+		PGA1_c23020	0.29	-0.3
2,386,118	-		PGA1_c23020	0.33	+1.0
2,386,144	+		PGA1_c23020	0.46	-0.0
2,386,144	+		PGA1_c23020	0.46	-2.7
2,386,152	-		PGA1_c23020	0.50	-0.3
2,386,152	-		PGA1_c23020	0.50	-1.8
2,386,152	-		PGA1_c23020	0.50	-1.5
2,386,152	-		PGA1_c23020	0.50	+0.5
2,386,152	-		PGA1_c23020	0.50	-0.0
2,386,152	-		PGA1_c23020	0.50	-0.5
2,386,202	-		PGA1_c23020	0.74	+0.1
2,386,269	+				+0.1
2,386,269	+				-1.4
2,386,269	+				+0.1
2,386,269	+				-0.5
2,386,274	+				+0.9
2,386,274	+				+0.2
2,386,277	-				-0.8
2,386,277	-				-0.9
2,386,277	-				+1.3
2,386,277	-				-0.1
2,386,277	-				+0.1
2,386,277	-				+0.1
2,386,282	-				+0.4
2,386,349	+		PGA1_c23030	0.11	-1.4
2,386,357	-		PGA1_c23030	0.12	-1.5
2,386,366	-		PGA1_c23030	0.13	-1.9
2,386,366	-		PGA1_c23030	0.13	-0.6
2,386,366	-		PGA1_c23030	0.13	-0.0
2,386,408	+		PGA1_c23030	0.18	+0.1
2,386,413	+		PGA1_c23030	0.18	+0.7
2,386,416	-		PGA1_c23030	0.19	+0.2
2,386,424	-		PGA1_c23030	0.20	+1.6
2,386,457	+		PGA1_c23030	0.23	-2.0
2,386,464	+		PGA1_c23030	0.24	+1.2
2,386,464	+		PGA1_c23030	0.24	+0.6
2,386,464	+		PGA1_c23030	0.24	-1.3
2,386,472	-		PGA1_c23030	0.25	+0.6
2,386,472	-		PGA1_c23030	0.25	-0.2
2,386,525	+		PGA1_c23030	0.31	+1.1
2,386,543	-		PGA1_c23030	0.33	-0.8
2,386,562	-		PGA1_c23030	0.35	+0.8
2,386,562	-		PGA1_c23030	0.35	-1.8
2,386,572	+		PGA1_c23030	0.37	+2.6
2,386,607	-		PGA1_c23030	0.41	+0.5
2,386,642	-		PGA1_c23030	0.44	+0.1
2,386,752	+		PGA1_c23030	0.57	+1.1
2,386,761	-		PGA1_c23030	0.58	-1.3
2,386,866	+		PGA1_c23030	0.70	+0.1
2,386,866	+		PGA1_c23030	0.70	+1.4
2,386,874	-		PGA1_c23030	0.71	-0.8
2,386,881	-		PGA1_c23030	0.72	-0.4
2,386,890	+		PGA1_c23030	0.73	-1.3
2,386,895	+		PGA1_c23030	0.73	+0.6
2,386,895	+		PGA1_c23030	0.73	-0.3
2,386,903	-		PGA1_c23030	0.74	+0.6
2,386,903	-		PGA1_c23030	0.74	+1.0
2,386,903	-		PGA1_c23030	0.74	+1.0
2,386,915	-		PGA1_c23030	0.76	+0.2
2,387,004	-		PGA1_c23030	0.86	-1.0
2,387,046	-				-1.4
2,387,052	+				-1.8
2,387,068	+				-0.0
2,387,076	-				+0.3
2,387,076	-				+0.9
2,387,119	-				+1.0
2,387,182	+				+1.0
2,387,188	+				+0.6
2,387,195	-				+0.6
2,387,202	+				-0.1
2,387,241	+				+0.1
2,387,241	+				+1.0
2,387,241	+				-0.9
2,387,241	+				+1.2
2,387,241	+				+0.8
2,387,241	+				+0.7
2,387,241	+				-0.4
2,387,241	+				-0.8
2,387,241	+				-0.3
2,387,249	-				-0.0
2,387,249	-				-0.1
2,387,249	-				-1.6
2,387,249	-				-0.2
2,387,249	-				+0.7
2,387,258	+				+0.9
2,387,259	-				+0.7
2,387,260	-				+0.6
2,387,265	+				-0.4
2,387,270	+				+1.0
2,387,270	+				+0.1
2,387,270	+				-0.3
2,387,270	+				+0.1
2,387,270	+				-1.0
2,387,270	+				-0.5
2,387,270	+				+0.3
2,387,270	+				-1.3
2,387,270	+				+0.5
2,387,270	+				-0.0
2,387,270	+				-0.1
2,387,275	+				+0.9
2,387,275	+				+0.7
2,387,275	+				+1.6
2,387,275	+				-1.6
2,387,275	+				-2.0
2,387,275	+				+0.2
2,387,275	+				-0.0
2,387,278	-				-2.4
2,387,278	-				-0.6
2,387,278	-				-0.4
2,387,280	-				-1.3
2,387,356	-				+0.6
2,387,357	-				+0.1
2,387,358	-				-0.0
2,387,399	+				-1.4
2,387,400	+				-0.5
2,387,400	+				-0.4
2,387,400	+				-1.4
2,387,400	+				-0.4
2,387,408	-				+0.4
2,387,408	-				+1.6
2,387,408	-				+0.2
2,387,408	-				-0.8
2,387,408	-				-0.3
2,387,408	-				+0.1
2,387,408	-				-0.6
2,387,429	-				+0.3
2,387,461	+				-0.0
2,387,461	+				-0.6
2,387,469	-				-0.3
2,387,469	-				+0.5
2,387,476	+				+1.6
2,387,476	+				+2.3
2,387,484	-				+1.3
2,387,484	-				-1.6
2,387,484	-				+0.2
2,387,484	-				+1.8
2,387,484	-				-0.7
2,387,484	-				-0.3
2,387,484	-				-0.2
2,387,484	-				-0.1
2,387,494	+				+0.7
2,387,535	+				+0.4
2,387,601	+				-3.4
2,387,609	-				+0.7
2,387,624	-				-0.0
2,387,626	+				+1.2
2,387,689	-				-0.7
2,387,725	+				-0.9
2,387,725	+				-1.2
2,387,743	-				-1.0
2,387,788	-				-0.8
2,387,788	-				+0.8
2,387,792	+				+0.8
2,387,793	-				-0.7
2,387,829	+				+0.6
2,387,847	+				-0.4
2,387,849	+				-0.3
2,387,855	-				+0.6
2,387,864	+				+0.9
2,387,872	-				+0.2
2,387,898	-				-0.9
2,387,941	-				+0.6
2,387,956	-		PGA1_c23040	0.12	+1.0
2,387,973	-		PGA1_c23040	0.14	+2.0
2,387,975	-		PGA1_c23040	0.14	-0.2
2,387,975	-		PGA1_c23040	0.14	+0.6
2,388,003	+		PGA1_c23040	0.18	+0.6
2,388,012	+		PGA1_c23040	0.20	-1.3
2,388,023	+		PGA1_c23040	0.21	-1.2
2,388,023	+		PGA1_c23040	0.21	-0.2
2,388,031	+		PGA1_c23040	0.22	-0.0
2,388,075	+		PGA1_c23040	0.29	+0.9